Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002120-TA|BGIBMGA002120-PA|IPR001300|Peptidase C2,
calpain, IPR000834|Peptidase M14, carboxypeptidase A
(510 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38608| Best HMM Match : Peptidase_C2 (HMM E-Value=0) 129 5e-30
SB_31652| Best HMM Match : Peptidase_C2 (HMM E-Value=0) 99 4e-21
SB_53237| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 3e-16
SB_45405| Best HMM Match : Calpain_III (HMM E-Value=6.1e-07) 50 3e-06
SB_54156| Best HMM Match : Peptidase_C2 (HMM E-Value=0) 39 0.008
SB_42450| Best HMM Match : Peptidase_C2 (HMM E-Value=0.7) 34 0.31
SB_56565| Best HMM Match : FAINT (HMM E-Value=9.8) 33 0.55
SB_54891| Best HMM Match : FAINT (HMM E-Value=6.4) 33 0.72
SB_18942| Best HMM Match : efhand (HMM E-Value=1.7e-30) 32 1.3
SB_1323| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.3
SB_25875| Best HMM Match : FAINT (HMM E-Value=6.8) 31 2.2
SB_23331| Best HMM Match : FAINT (HMM E-Value=3.4) 31 2.2
SB_12390| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.2
SB_45992| Best HMM Match : HCO3_cotransp (HMM E-Value=0) 31 2.9
SB_8768| Best HMM Match : TrmB (HMM E-Value=0.86) 31 2.9
SB_28360| Best HMM Match : Phosphodiest (HMM E-Value=0) 30 5.1
SB_28909| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.1
SB_3395| Best HMM Match : RVT_1 (HMM E-Value=0.00037) 30 5.1
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 29 8.9
SB_6520| Best HMM Match : MANEC (HMM E-Value=2.2e-12) 29 8.9
>SB_38608| Best HMM Match : Peptidase_C2 (HMM E-Value=0)
Length = 842
Score = 129 bits (312), Expect = 5e-30
Identities = 105/344 (30%), Positives = 161/344 (46%), Gaps = 47/344 (13%)
Query: 49 RLHGSYEALKYGSLLDGLADLTGGITESIVMPE---------LSDGSALRTLLDTSSVVT 99
+L+GSYE+LK G + L D TGG+ ES + + + L+ S
Sbjct: 349 KLNGSYESLKGGQTGEALEDFTGGLAESFDLNKNVPKDLFCIMQTAEKRHALMGCSIAAK 408
Query: 100 AHYFPPVTIISVF--FLSLPTGIRLVKIRLRRSVINIFQVDTTNEPVYLIRLRRPLGHGE 157
A+ + TG R VK + RR ++ V L+R+R P G+
Sbjct: 409 ANEIEAKLNNGLVKGHAYTVTGCRQVKAKTRRGDLD----------VELVRVRNPWGNER 458
Query: 158 TPISHIVLDTALWKTIPQYERDRLMTASKG---VWMLFSDFQRLFPRIEMVHLDTETSRA 214
++ W+ + YE+ + + WM F DF++ F +E+ L +++
Sbjct: 459 EWKGAWGDGSSEWQLLSDYEKKSIGLTFEDDGEFWMSFDDFKKHFTTLEICMLGADSAME 518
Query: 215 ELSLSEKQKWQMKMHQGGWKRGVSAGGCRNYVNFFHTNPQVQIMLNEPD-------TVII 267
S+ ++ + G W+RG++AGGCRN++ FH NPQ +I L + D TVII
Sbjct: 519 GSSVG----FESRSEHGMWRRGLTAGGCRNFIKTFHKNPQFRITLQDSDDDADDLCTVII 574
Query: 268 SLNQ--------HSIMEPKVIGFSVYKMPKFLTETAN--QMFFKRIKSTINSQ-YTNSRQ 316
+L Q H I P IGFS+YK+ + + N FF+ ST S + NSR+
Sbjct: 575 ALMQKDRRKEKKHGI-NPLTIGFSIYKLEEEKDKQGNLDMEFFQYHASTARSPVFINSRE 633
Query: 317 VSQRCQLESGAYLIMPTTFEPREEAQFTLRIYSNKPLKMKVLDD 360
V R L G Y+++PTTF P EE F LR+YS K K +D+
Sbjct: 634 VVGRYALPPGEYVVIPTTFNPNEEGNFVLRMYSEKAHKTCEVDE 677
Score = 37.5 bits (83), Expect = 0.025
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 431 VFKTHAREKMGVLRVERLRDALKDVGFIVPERVISLLVFRYMRKDGMLRFGDFVSAVMHL 490
+F+ +K G + LR ALK+ GF + V+ + RY DG + DF+ + L
Sbjct: 715 IFQVFDEDKSGEMDTYELRGALKEAGFTLSNSVLYAVSARYSTGDGKVNVDDFMEILTRL 774
Query: 491 H 491
+
Sbjct: 775 N 775
>SB_31652| Best HMM Match : Peptidase_C2 (HMM E-Value=0)
Length = 1133
Score = 99 bits (238), Expect = 4e-21
Identities = 75/250 (30%), Positives = 126/250 (50%), Gaps = 45/250 (18%)
Query: 144 VYLIRLRRPLGHGETPISHIVLDTALWKTIPQYERDRL-MTASKG--VWMLFSDFQRLFP 200
V LIRLR P + + W + E+ L +T WM F DF F
Sbjct: 288 VDLIRLRNPHANSSEWRGAWSDRSPEWNMLSSQEKRELNLTFDDDGEFWMSFDDFLNNFT 347
Query: 201 RIEMVHLDTETSRAELSLSEKQKWQMKMHQGGWKRGVSAGGCRNYVNFFHTNPQVQIMLN 260
R+E+ L ++ + ++++KW ++ +G W++GV+AGGCRN++ F+TNPQ ++ L
Sbjct: 348 RLEICMLTPDS----MEQNDRRKWDVQNEKGRWQKGVTAGGCRNFIASFYTNPQFRVCLK 403
Query: 261 EPD-------TVIISL----NQHSIMEP--KVIGFSVYKM-----PKF----LT------ 292
PD TVI+SL + H + P IGF++YK+ F LT
Sbjct: 404 NPDDDDDELCTVIVSLMRVDHSHRVKIPDRAPIGFAIYKVIHSKNTSFDRGVLTLLTGVY 463
Query: 293 ---------ETANQMFFKRIKS-TINSQYTNSRQVSQRCQLESGAYLIMPTTFEPREEAQ 342
+ ++ FF+ K+ + + ++ R++S R +L +G Y+++P+TF P +E
Sbjct: 464 SAPSDMRKGDRLDRAFFEYNKAVAMTTSFSKLREISSRYRLHAGEYVVIPSTFNPGQEGD 523
Query: 343 FTLRIYSNKP 352
F LRI+S +P
Sbjct: 524 FLLRIFSERP 533
Score = 33.9 bits (74), Expect = 0.31
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 49 RLHGSYEALKYGSLLDGLADLTGGITESI 77
+L GSYEA+ G + + L D+TGG+ E++
Sbjct: 162 KLCGSYEAMSLGRISEALQDMTGGMIENV 190
>SB_53237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 83.8 bits (198), Expect = 3e-16
Identities = 76/285 (26%), Positives = 126/285 (44%), Gaps = 35/285 (12%)
Query: 88 LRTLLDTSSVVTAHYFPP---------VTIISVFFLSLPTGIRLVKIRLRRSVINIFQVD 138
LR L + + A Y P V ++ F L I L ++ + ++++F
Sbjct: 425 LRLLREKGGIHNAQYIEPGFYTSDRTLVLLLKCFSFLLMCAI-LCQVTVGEGLLSLFN-- 481
Query: 139 TTNEPVYLIRLRRPLGHGETPISHIVLDTALWKTIPQYERDRLMTASKG---VWMLFSDF 195
+ Y+IRLR P G E ++ WK + +R ++ + WM F DF
Sbjct: 482 --KKHFYMIRLRNPWGEKEWN-GRWSDESEEWKKLKPGDRKKMGIVFENDGEFWMEFDDF 538
Query: 196 QRLFPRIEMVHLDTETSRAELSLSEKQKWQMKMHQGGWKRGVSAGGCRNYVNFFHTNPQV 255
R F + H+ ++A + KQ W + H W +G +AGGC + F NPQ
Sbjct: 539 CREFTDCTLCHV---INKAMIHKVFKQ-WHIYKHNYNWTQGQNAGGCVQNQDTFLKNPQY 594
Query: 256 QIML--NEPDTVIISLNQHSIMEPK-------VIGFSVYKMPKFLTETANQMFFKRIKST 306
+ NE + ++SL Q + K IGF + K+ + + MF K
Sbjct: 595 AFSITDNEGEDAMVSLMQEDRRKDKSKGVGNLTIGFYIMKVEENRKYRVHSMFPK----A 650
Query: 307 INSQYTNSRQVSQRCQLESGAYLIMPTTFEPREEAQFTLRIYSNK 351
+S + N+R+V R L +G YL++P+T+EP F +RI++ K
Sbjct: 651 GDSIFINAREVMNRFFLAAGRYLVVPSTYEPHTPGHFMMRIFTRK 695
Score = 37.1 bits (82), Expect = 0.034
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 49 RLHGSYEALKYGSLLDGLADLTGGITESI 77
+L G+YEAL GS D L D TGG+ E+I
Sbjct: 171 KLAGTYEALAAGSTADALVDFTGGVAEAI 199
>SB_45405| Best HMM Match : Calpain_III (HMM E-Value=6.1e-07)
Length = 363
Score = 50.4 bits (115), Expect = 3e-06
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 9/135 (6%)
Query: 305 STINSQYTNSRQVSQRCQLESGAYLIMPTTFEPREEAQFTLRIYSNKPLKMKVLDDPPQM 364
ST S + NSR+V R +L G Y+I+P+TF EA F LRI+S K + L +
Sbjct: 123 STERSTFINSREVVGRFELAPGEYVIVPSTFIQNAEADFLLRIFSEKAVSSSALTESTFF 182
Query: 365 TKAAL--VKAPPGSDSNGF------FQYETLFLQL-ADAHRTIDIFELQELLDACLPNDY 415
+ V +D+ F F E +F + D +I+ FEL++ L P
Sbjct: 183 GSLGIDQVDLKDMNDAEKFRVFFDKFAGEAIFKRYDIDESGSIEAFELRQALFDAYPMLC 242
Query: 416 IKSCVSIDTLKHLQL 430
I +S+ + L L
Sbjct: 243 IALTLSLTIIVELSL 257
>SB_54156| Best HMM Match : Peptidase_C2 (HMM E-Value=0)
Length = 1001
Score = 39.1 bits (87), Expect = 0.008
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 49 RLHGSYEALKYGSLLDGLADLTGGITESIVM 79
+LHGSYEAL G ++GLA LTG ESI +
Sbjct: 581 KLHGSYEALTAGRSIEGLATLTGAPCESIAL 611
>SB_42450| Best HMM Match : Peptidase_C2 (HMM E-Value=0.7)
Length = 85
Score = 33.9 bits (74), Expect = 0.31
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 50 LHGSYEALKYGSLLDGLADLTGGITES 76
L+GSYE+LK G + L D TGG+ ES
Sbjct: 2 LNGSYESLKGGQTGEALEDFTGGLAES 28
>SB_56565| Best HMM Match : FAINT (HMM E-Value=9.8)
Length = 302
Score = 33.1 bits (72), Expect = 0.55
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVVTA 100
+TS G R + Y + DG + T IV P SDG +R++ DTS ++
Sbjct: 118 NTSDGGDIRSISDTSQIVYPNTSDGCDIRSTSDTSQIVYPNTSDGGDIRSISDTSQII-- 175
Query: 101 HYFPPVTIISVF 112
+P + ++ ++
Sbjct: 176 --YPTLVMVVIY 185
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
+TS G R + Y + DG + T IV P SDG +R++ DTS +V
Sbjct: 18 NTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIV 75
Score = 30.7 bits (66), Expect = 2.9
Identities = 19/58 (32%), Positives = 26/58 (44%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
+TS G R + Y + DG + T IV P SDG +R+ DTS +V
Sbjct: 58 NTSDGGDIRSISDTSQIVYPNTSDGCDIRSISDTSQIVYPNTSDGCDIRSTSDTSQIV 115
Score = 30.3 bits (65), Expect = 3.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 59 YGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
Y + DG + T IV P SDG +R++ DTS +V
Sbjct: 96 YPNTSDGCDIRSTSDTSQIVYPNTSDGGDIRSISDTSQIV 135
Score = 29.9 bits (64), Expect = 5.1
Identities = 19/58 (32%), Positives = 26/58 (44%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
+TS G R + Y + DG + T IV P SDG +R+ DTS +V
Sbjct: 194 NTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIVYPNTSDGGDIRSTSDTSQIV 251
Score = 29.1 bits (62), Expect = 8.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 74 TESIVMPELSDGSALRTLLDTSSVV 98
T IV P SDG +R++ DTS +V
Sbjct: 11 TSQIVYPNTSDGGDIRSISDTSQIV 35
Score = 29.1 bits (62), Expect = 8.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 74 TESIVMPELSDGSALRTLLDTSSVV 98
T IV P SDG +R++ DTS +V
Sbjct: 187 TSQIVYPNTSDGGDIRSISDTSQIV 211
>SB_54891| Best HMM Match : FAINT (HMM E-Value=6.4)
Length = 107
Score = 32.7 bits (71), Expect = 0.72
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
+TS G R + Y + DG + T IV P SDG +R++ DTS +V
Sbjct: 19 NTSNGGDIRSISDTSQIVYPNTSDGCDIRSISDTSQIVYPNTSDGGDIRSISDTSQIV 76
>SB_18942| Best HMM Match : efhand (HMM E-Value=1.7e-30)
Length = 233
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 425 LKHLQLVFKTHAREKMGVLRVERLRDALKDVGF-IVPERVISLLVFRYMRKDGMLRFGDF 483
++ L+LVF T +K G + LR A++ +GF I E + ++ + G + F +F
Sbjct: 89 IRDLKLVFDTFDTDKSGSIDGRELRKAMRTLGFKISKEGIAGMIADLDADQSGRIEFDEF 148
Query: 484 VSAVM 488
+ ++
Sbjct: 149 LDFII 153
>SB_1323| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 324
Score = 31.9 bits (69), Expect = 1.3
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDG--LADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
+TS G R + Y + DG + ++G T IV P SDG +R++ DTS +V
Sbjct: 19 NTSNGGDIRSISDTSQIVYPNTSDGGDIRSISG--TSQIVYPNTSDGGDIRSISDTSQIV 76
Score = 31.5 bits (68), Expect = 1.7
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
+TS G R + Y + DG + T IV P SDG +R++ DTS +V
Sbjct: 159 NTSNGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIV 216
Score = 31.5 bits (68), Expect = 1.7
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDG--LADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
+TS G R + Y + DG + ++G T IV P SDG +R++ DTS +V
Sbjct: 239 NTSDGGDIRSISDTSQIVYPNTSDGGDIRSISG--TSQIVYPNTSDGGDIRSISDTSQIV 296
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
+TS G R + Y + DG + T IV P SDG +R++ DTS +V
Sbjct: 39 NTSDGGDIRSISGTSQIVYPNTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIV 96
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
+TS G R + Y + DG + T IV P SDG +R++ DTS +V
Sbjct: 59 NTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIVYPNTSDGGNIRSISDTSQIV 116
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
+TS G R + Y + DG + T IV P SDG +R++ DTS +V
Sbjct: 79 NTSDGGDIRSISDTSQIVYPNTSDGGNIRSISDTSQIVYPNTSDGGDIRSISDTSQIV 136
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
+TS G R + Y + DG + T IV P SDG +R++ DTS +V
Sbjct: 99 NTSDGGNIRSISDTSQIVYPNTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIV 156
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
+TS G R + Y + DG + T IV P SDG +R++ DTS +V
Sbjct: 179 NTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIV 236
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
+TS G R + Y + DG + T IV P SDG +R++ DTS +V
Sbjct: 199 NTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIV 256
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
+TS G R + Y + DG + T IV P SDG +R++ DTS +V
Sbjct: 259 NTSDGGDIRSISGTSQIVYPNTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIV 316
Score = 29.1 bits (62), Expect = 8.9
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
+TS G R + Y + DG + T IV P S+G +R++ DTS +V
Sbjct: 119 NTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIVYPNTSNGGDIRSISDTSQIV 176
>SB_25875| Best HMM Match : FAINT (HMM E-Value=6.8)
Length = 187
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
+TS G R + Y + DG + T IV P SDG +R++ DTS +V
Sbjct: 19 NTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIV 76
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
+TS G R + Y + DG + T IV P SDG +R++ DTS +V
Sbjct: 39 NTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIV 96
Score = 30.3 bits (65), Expect = 3.9
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
+TS G R + Y + DG + T IV P SDG +R++ DTS +V
Sbjct: 99 NTSDDGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIV 156
Score = 29.1 bits (62), Expect = 8.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 74 TESIVMPELSDGSALRTLLDTSSVV 98
T IV P SDG +R++ DTS +V
Sbjct: 12 TSQIVYPNTSDGGDIRSISDTSQIV 36
>SB_23331| Best HMM Match : FAINT (HMM E-Value=3.4)
Length = 204
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
+TS G R + Y + DG + T IV P SDG +R++ DTS +V
Sbjct: 9 NTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIV 66
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
+TS G R + Y + DG + T IV P SDG +R++ DTS +V
Sbjct: 29 NTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIV 86
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
+TS G R + Y + DG + T IV P SDG +R++ DTS +V
Sbjct: 49 NTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIV 106
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 41 DTSYAGVFRLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVV 98
+TS G R + Y + DG + T IV P SDG +R++ DTS +V
Sbjct: 69 NTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIVYPNTSDGGDIRSISDTSQIV 126
Score = 30.3 bits (65), Expect = 3.9
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 74 TESIVMPELSDGSALRTLLDTSSVV 98
T IV P +SDG +R++ DTS +V
Sbjct: 132 TSQIVYPNISDGGDIRSISDTSQIV 156
Score = 29.1 bits (62), Expect = 8.9
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 74 TESIVMPELSDGSALRTLLDTSSVV 98
T IV P SDG +R++ DTS +V
Sbjct: 2 TSQIVYPNTSDGGDIRSISDTSQIV 26
>SB_12390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 868
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 120 IRLVKIRLRRSVINIFQVDTTNEPVYLIRLRRPLGHGETPISHIVLDTALW 170
IR I + S+ N+ + + V + LR PLG G P +H ++ TA+W
Sbjct: 575 IRKYPIPVDDSIENLIVIVSVEADVPYVVLREPLGRG-IPQTHSLVKTAIW 624
>SB_45992| Best HMM Match : HCO3_cotransp (HMM E-Value=0)
Length = 890
Score = 30.7 bits (66), Expect = 2.9
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 54 YEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVVTAHYFPPVTIISVFF 113
Y+ +KY + GL LT G TE++ ++S+ + T+L + AH V F
Sbjct: 554 YDGIKYIYDIFGLYPLTSGTTENVDGKDVSNTALFTTILFFGTFFVAHIIRDVR--HSRF 611
Query: 114 LSLPTGIRLVKIRLRRSVINIFQVDTTNEPVYLIRLRRPLGHGET 158
L+ + + +++ + V+ + + +Y+ RL P G T
Sbjct: 612 LNHTLRRVISDFGVLIAIVAMILVELSAQSIYVQRLNVPDGFDVT 656
>SB_8768| Best HMM Match : TrmB (HMM E-Value=0.86)
Length = 480
Score = 30.7 bits (66), Expect = 2.9
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 11/94 (11%)
Query: 170 WKTIP-QYERDRLMTASKGVWMLFSDFQRLFPRIEMVHLDTETSRAELSLSEKQKWQMKM 228
WK P ++++D + + +K W + S+ +R P + R S+ + K +
Sbjct: 232 WKIYPLEFKQDFMESLNKAEWSVRSERRRRGPGMH---------RGSFSIDDSPKDTFVL 282
Query: 229 HQGGWKRGVSAGGCRNYVNFFHTNPQVQIMLNEP 262
GW +GV RN +++ PQ + L P
Sbjct: 283 -MSGWTKGVCFVNGRNLGRYWNIGPQYTLYLPSP 315
>SB_28360| Best HMM Match : Phosphodiest (HMM E-Value=0)
Length = 483
Score = 29.9 bits (64), Expect = 5.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 215 ELSLSEKQKWQMKMHQGGWKRG 236
E+ SE+ +W K H+G W RG
Sbjct: 338 EMGWSERYEWYSKYHEGTWTRG 359
>SB_28909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 29.9 bits (64), Expect = 5.1
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 250 HTNPQVQ--IMLNEPDTVIISLNQHSIMEPKVIGFSVYKMPKFLTETANQMFFKRIKSTI 307
++NPQV + + P SL + P+V S+Y P+ T N ++ + T
Sbjct: 272 YSNPQVTQTSLYSNPQVTRTSLYSN----PQVTRTSLYSNPQV---TRNSLY-SNPQVTR 323
Query: 308 NSQYTNSRQVSQRCQLESGAYLIMPTTFEPREEAQFTLRIYSNKPLKMKVLDDPPQMTKA 367
NS Y+N QV+ R L S + + + + Q +L YSN + L PQ+T+
Sbjct: 324 NSLYSNP-QVT-RTSLYSNPQVTRTSLYSNPQVTQNSL--YSNPQVTRNFLYSNPQVTRT 379
Query: 368 ALVKAP 373
+L P
Sbjct: 380 SLYSNP 385
Score = 29.9 bits (64), Expect = 5.1
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 277 PKVIGFSVYKMPKFLTETANQMFFKRIKSTINSQYTNSRQVSQRCQLESGAYLIMPTTFE 336
P+V S+Y P + + + T NS Y+N QV+Q + S +I + +
Sbjct: 561 PQVTRNSLYSNP----QVTRASLYSNPQVTRNSLYSNP-QVTQ-ASIYSNPQVIQASLYL 614
Query: 337 PREEAQFTLRIYSNKPLKMKVLDDPPQMTKAALVKAP 373
+ Q +L YSN + LD PQ+T+ +L P
Sbjct: 615 NPQVTQASL--YSNPQVTRTSLDSNPQVTRNSLYSNP 649
Score = 29.5 bits (63), Expect = 6.7
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 11/156 (7%)
Query: 250 HTNPQVQIMLNEPDTVIISLNQHSIMEPKVIGFSVYKMPKFL-TETANQMFFKRIKSTIN 308
++NPQV + + + + +S P+V S+Y P+ T + R N
Sbjct: 624 YSNPQVTRTSLDSNPQVTRNSLYS--NPQVTRTSLYSNPQVTRTSLYSNPQVTRTSLDSN 681
Query: 309 SQYTNSRQVSQRCQLESGAYL---IMPTTFEPREEAQFTLRIYSNKPLKMKVLDDPPQMT 365
Q T + S + YL + T+ + T +YSN + LD PQ+T
Sbjct: 682 PQVTRASLYSNPQVTRNSLYLNPQVTRTSLYSNPQVTRT-SLYSNPQVTRTSLDSNPQVT 740
Query: 366 KAALVKAP----PGSDSNGFFQYETLFLQLADAHRT 397
+A+L P DSN +L+ HRT
Sbjct: 741 RASLYSNPQVTRTSLDSNPQVTRASLYSNPQYLHRT 776
Score = 29.1 bits (62), Expect = 8.9
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 14/129 (10%)
Query: 247 NFFHTNPQVQ--IMLNEPDTVIISLNQHSIMEPKVIGFSVYKMPKFLTETANQMFFKRIK 304
NF ++NPQV + + P SL + P+V S+Y P+ T N +F +
Sbjct: 456 NFLYSNPQVTRTSLYSNPQVTRNSLYSN----PQVTRNSLYSNPQV---TRNSLF-SNPQ 507
Query: 305 STINSQYTNSRQVSQRCQLESGAYLIMPTTFEPREEAQFTLRIYSNKPLKMKVLDDPPQM 364
T NS Y+N Q++ L S + + + P + T +YSN + L PQ+
Sbjct: 508 VTRNSLYSNP-QITPT-SLYSNPQVTRISLY-PNPQVTPT-SLYSNPQVTRNFLYSNPQV 563
Query: 365 TKAALVKAP 373
T+ +L P
Sbjct: 564 TRNSLYSNP 572
>SB_3395| Best HMM Match : RVT_1 (HMM E-Value=0.00037)
Length = 782
Score = 29.9 bits (64), Expect = 5.1
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 354 KMKVLDDPPQMTKAALVKAPPGSDSNGFFQYETLFLQ-LADAHRTIDIFELQELLDACLP 412
++ +L P + + A V PPG + G T F++ + +A T + QE+ D +
Sbjct: 615 QLLLLKKRPSIREVAKVILPPGGGTFGTHPLVTRFVRGVYNARPTFPRY--QEIWDVAVV 672
Query: 413 NDYIKSCVSIDTLKHLQLVFKT 434
Y+K+ D L ++L KT
Sbjct: 673 LSYLKTLHPPDKLSLMELTMKT 694
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 29.1 bits (62), Expect = 8.9
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 405 ELLDACLPNDYIKSCVSIDTLKHLQLVFKTHAREKMGVL-RVERLRDALKDVGFIVPE 461
E + A P +Y+ S D ++ L+L + REK +L +R+R+ +K+ +V +
Sbjct: 376 ERMVAASPGEYLNEAHSQDEIERLKLELEVVQREKEQILEEKDRIREIVKEENSMVSD 433
>SB_6520| Best HMM Match : MANEC (HMM E-Value=2.2e-12)
Length = 452
Score = 29.1 bits (62), Expect = 8.9
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 75 ESIVMPELSDGSALRT----LLDTSSVVTAHYFPPVTIISVFFLSLPTGIRLVKIRLRRS 130
E +V P +SD + T +++ +V+ F V I+ + ++L +R+VK RLRR
Sbjct: 379 EDVVKPNISDVVVIETSHLRIVENKAVLPLAIFLVVAIVMLLVVALR--LRIVKSRLRRK 436
Query: 131 VINIFQVDTTNEPVYL 146
D +YL
Sbjct: 437 TFATDDADYLINGMYL 452
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.325 0.139 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,347,118
Number of Sequences: 59808
Number of extensions: 654806
Number of successful extensions: 1627
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1535
Number of HSP's gapped (non-prelim): 79
length of query: 510
length of database: 16,821,457
effective HSP length: 85
effective length of query: 425
effective length of database: 11,737,777
effective search space: 4988555225
effective search space used: 4988555225
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 62 (29.1 bits)
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