Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002120-TA|BGIBMGA002120-PA|IPR001300|Peptidase C2,
calpain, IPR000834|Peptidase M14, carboxypeptidase A
(510 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 122 6e-28
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 122 8e-28
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 122 8e-28
AC024214-9|AAF36079.1| 790|Caenorhabditis elegans Calpain famil... 103 4e-22
AC024763-5|AAO12402.1| 716|Caenorhabditis elegans Calpain famil... 93 4e-19
AC024214-10|AAF36080.1| 778|Caenorhabditis elegans Calpain fami... 85 8e-17
AL132848-5|CAB60389.2| 702|Caenorhabditis elegans Hypothetical ... 67 3e-11
Z82277-1|CAB05248.1| 648|Caenorhabditis elegans Hypothetical pr... 56 4e-08
U12921-1|AAB60256.1| 648|Caenorhabditis elegans sex determinati... 56 4e-08
AC024763-6|AAO12403.1| 603|Caenorhabditis elegans Calpain famil... 47 3e-05
Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical pr... 31 2.5
AL117204-2|CAB76734.1| 272|Caenorhabditis elegans Hypothetical ... 30 4.4
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 122 bits (294), Expect = 6e-28
Identities = 93/327 (28%), Positives = 156/327 (47%), Gaps = 29/327 (8%)
Query: 49 RLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVVTAHYFPPVTI 108
+L GSYEALK G+ + L D+TGG+TE I + + ++ ++ + +
Sbjct: 407 KLFGSYEALKGGTTSEALEDMTGGLTEFIDLKN-PPRNLMQMMMRGFEMGSLFGCSIEAD 465
Query: 109 ISVFFLSLPTGIRLVKIRLRRSVINIFQVDTTNEPVYLIRLRRPLGHGETPISHIVLDTA 168
+V+ + G LVK S+ VD N ++R+R P G+ + ++
Sbjct: 466 PNVWEAKMSNG--LVKGHAY-SITGCRIVDGPNGQTCILRIRNPWGNEQEWNGPWSDNSR 522
Query: 169 LWKTIPQYERDRL---MTASKGVWMLFSDFQRLFPRIEMVHLDTETSRAELSLSEKQK-- 223
W+++P + + WM F DF R F ++E+ +L + ++ +
Sbjct: 523 EWRSVPDSVKQDMGLKFDHDGEFWMSFDDFMRNFEKMEICNLGPDVMDEVYQMTGVKAAG 582
Query: 224 --WQMKMHQGGWKRGVSAGGCRNYVNFFHTNPQVQIMLNEPD--------TVIISLNQ-- 271
W H G W R +AGGCRNY+N F NPQ ++ L + D TVI ++ Q
Sbjct: 583 MVWAANTHDGAWVRNQTAGGCRNYINTFANNPQFRVQLTDSDPDDDDELCTVIFAVLQKY 642
Query: 272 -----HSIMEPKVIGFSVYKMPKFLTETA--NQMFFKRIKSTINS-QYTNSRQVSQRCQL 323
++ IGF+VY M ++ FF KS + S + N R+++ R ++
Sbjct: 643 RRNLKQDGLDNVPIGFAVYDMNNAGNNRGRLSKQFFAANKSAMRSAAFINLREMTGRFRV 702
Query: 324 ESGAYLIMPTTFEPREEAQFTLRIYSN 350
G Y+++P+TFEP EEA+F LR+Y+N
Sbjct: 703 PPGNYVVVPSTFEPNEEAEFMLRVYTN 729
Score = 44.4 bits (100), Expect = 2e-04
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 11 VGDKWLVSCLGVLYLCKGLFYRVVPADQRMDTSYAGVFRLHGSYEALKYGSLLDGLAD 68
+GD WL++ L L LFYRVVP DQ +YAG+F ++ +YG +D + D
Sbjct: 322 LGDCWLLAAAANLTLKDELFYRVVPPDQSFTENYAGIFH----FQFWQYGKWVDVVID 375
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 122 bits (293), Expect = 8e-28
Identities = 89/324 (27%), Positives = 153/324 (47%), Gaps = 26/324 (8%)
Query: 49 RLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVVTAHYFPPVTI 108
+L GSYEALK G+ + L D+TGG+TE I + + ++ ++ + +
Sbjct: 432 KLFGSYEALKGGTTSEALEDMTGGLTEFIDLKN-PPRNLMQMMMRGFEMGSLFGCSIEAD 490
Query: 109 ISVFFLSLPTGIRLVKIRLRRSVINIFQVDTTNEPVYLIRLRRPLGHGETPISHIVLDTA 168
+V+ + G LVK S+ VD N ++R+R P G+ + ++
Sbjct: 491 PNVWEAKMSNG--LVKGHAY-SITGCRIVDGPNGQTCILRIRNPWGNEQEWNGPWSDNSR 547
Query: 169 LWKTIPQYERDRL---MTASKGVWMLFSDFQRLFPRIEMVHLDTETSRAELSLSEKQK-- 223
W+++P + + WM F DF R F ++E+ +L + ++ +
Sbjct: 548 EWRSVPDSVKQDMGLKFDHDGEFWMSFDDFMRNFEKMEICNLGPDVMDEVYQMTGVKAAG 607
Query: 224 --WQMKMHQGGWKRGVSAGGCRNYVNFFHTNPQVQIMLNEPD--------TVIISLNQ-- 271
W H G W R +AGGCRNY+N F NPQ ++ L + D TVI ++ Q
Sbjct: 608 MVWAANTHDGAWVRNQTAGGCRNYINTFANNPQFRVQLTDSDPDDDDELCTVIFAVLQKY 667
Query: 272 -----HSIMEPKVIGFSVYKMPKFLTETANQMFFKRIKSTINSQYTNSRQVSQRCQLESG 326
++ IGF+VY + Q F + ++ + N R+++ R ++ G
Sbjct: 668 RRNLKQDGLDNVPIGFAVYDAGNNRGRLSKQFFAANKSAMRSAAFINLREMTGRFRVPPG 727
Query: 327 AYLIMPTTFEPREEAQFTLRIYSN 350
Y+++P+TFEP EEA+F LR+Y+N
Sbjct: 728 NYVVVPSTFEPNEEAEFMLRVYTN 751
Score = 44.4 bits (100), Expect = 2e-04
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 11 VGDKWLVSCLGVLYLCKGLFYRVVPADQRMDTSYAGVFRLHGSYEALKYGSLLDGLAD 68
+GD WL++ L L LFYRVVP DQ +YAG+F ++ +YG +D + D
Sbjct: 347 LGDCWLLAAAANLTLKDELFYRVVPPDQSFTENYAGIFH----FQFWQYGKWVDVVID 400
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 122 bits (293), Expect = 8e-28
Identities = 89/324 (27%), Positives = 153/324 (47%), Gaps = 26/324 (8%)
Query: 49 RLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVVTAHYFPPVTI 108
+L GSYEALK G+ + L D+TGG+TE I + + ++ ++ + +
Sbjct: 453 KLFGSYEALKGGTTSEALEDMTGGLTEFIDLKN-PPRNLMQMMMRGFEMGSLFGCSIEAD 511
Query: 109 ISVFFLSLPTGIRLVKIRLRRSVINIFQVDTTNEPVYLIRLRRPLGHGETPISHIVLDTA 168
+V+ + G LVK S+ VD N ++R+R P G+ + ++
Sbjct: 512 PNVWEAKMSNG--LVKGHAY-SITGCRIVDGPNGQTCILRIRNPWGNEQEWNGPWSDNSR 568
Query: 169 LWKTIPQYERDRL---MTASKGVWMLFSDFQRLFPRIEMVHLDTETSRAELSLSEKQK-- 223
W+++P + + WM F DF R F ++E+ +L + ++ +
Sbjct: 569 EWRSVPDSVKQDMGLKFDHDGEFWMSFDDFMRNFEKMEICNLGPDVMDEVYQMTGVKAAG 628
Query: 224 --WQMKMHQGGWKRGVSAGGCRNYVNFFHTNPQVQIMLNEPD--------TVIISLNQ-- 271
W H G W R +AGGCRNY+N F NPQ ++ L + D TVI ++ Q
Sbjct: 629 MVWAANTHDGAWVRNQTAGGCRNYINTFANNPQFRVQLTDSDPDDDDELCTVIFAVLQKY 688
Query: 272 -----HSIMEPKVIGFSVYKMPKFLTETANQMFFKRIKSTINSQYTNSRQVSQRCQLESG 326
++ IGF+VY + Q F + ++ + N R+++ R ++ G
Sbjct: 689 RRNLKQDGLDNVPIGFAVYDAGNNRGRLSKQFFAANKSAMRSAAFINLREMTGRFRVPPG 748
Query: 327 AYLIMPTTFEPREEAQFTLRIYSN 350
Y+++P+TFEP EEA+F LR+Y+N
Sbjct: 749 NYVVVPSTFEPNEEAEFMLRVYTN 772
Score = 44.4 bits (100), Expect = 2e-04
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 11 VGDKWLVSCLGVLYLCKGLFYRVVPADQRMDTSYAGVFRLHGSYEALKYGSLLDGLAD 68
+GD WL++ L L LFYRVVP DQ +YAG+F ++ +YG +D + D
Sbjct: 368 LGDCWLLAAAANLTLKDELFYRVVPPDQSFTENYAGIFH----FQFWQYGKWVDVVID 421
>AC024214-9|AAF36079.1| 790|Caenorhabditis elegans Calpain family
protein 6 protein.
Length = 790
Score = 103 bits (246), Expect = 4e-22
Identities = 95/335 (28%), Positives = 148/335 (44%), Gaps = 45/335 (13%)
Query: 49 RLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVVTAHYFPPVTI 108
+L+G+YE L G+ + L D TGG+TE + T D +++ A + +
Sbjct: 294 KLYGTYEHLDGGTTTEALEDFTGGLTEFYDL----------TSTD-KTMILAMIMKGMQM 342
Query: 109 ISVFFLSLPTGIRLVKIRLRR--------SVINIFQVDTTNEPVYLIRLRRPLGHGETPI 160
S+F S+ R + +L SV + V+T E V L+R+R P G E
Sbjct: 343 GSLFACSIDPDPREKEAQLANGLVRGHAYSVTGVHTVETDKEKVALLRIRNPWGDTEWN- 401
Query: 161 SHIVLDTALWKTIPQYERDRLMTASKG---VWMLFSDFQRLFPRIEMVHLDTE-----TS 212
++LW+ + Q +R+++ K WM DF F ++ +L + T
Sbjct: 402 GDWSDKSSLWEQVDQEQREKMEFRIKEDGEFWMCLDDFMAQFANLDCCNLSADVMHEITE 461
Query: 213 RAELSLSEKQ--KWQMKMHQGGW-KRGVSAGGCRNYVNFFHTNPQVQIML-------NEP 262
E+ + EKQ +W K G W R +AGGC N N F TNPQ + N+
Sbjct: 462 MTEIEVMEKQSKQWIQKSADGEWCSRKGTAGGCSNNENTFCTNPQYETYFRATSPSSNDK 521
Query: 263 DTVIISLNQ-------HSIMEPKVIGFSVYKMPKFLTETANQMFFKRIKSTINSQYTNSR 315
TVI ++ Q H ++ IG SVYKM + +M + + R
Sbjct: 522 CTVIAAVFQKYRRNQLHRGLDMLQIGLSVYKMSGPNEKVTAEMMKTHAPIASTKLFVDYR 581
Query: 316 QVSQRCQLESGAYLIMPTTFEPREEAQFTLRIYSN 350
+ R + G Y+I+P TFEP +A+F LR +SN
Sbjct: 582 EAVVRFTVPPGYYVIVPCTFEPNHDAEFLLRTFSN 616
Score = 40.3 bits (90), Expect = 0.003
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 10 TVGDKWLVSCLGVLYLCKGLFYRVVPADQRMDTSYAGVFRLHGSYEALKYGSLLDGLAD 68
++G+ W ++ L LFYRVVP DQ +YAG+F ++ +YG +D + D
Sbjct: 208 SLGNCWFLAAAATLAQRDELFYRVVPPDQSFTENYAGIFH----FQFWRYGEWVDVVID 262
>AC024763-5|AAO12402.1| 716|Caenorhabditis elegans Calpain family
protein 4, isoform a protein.
Length = 716
Score = 93.1 bits (221), Expect = 4e-19
Identities = 89/344 (25%), Positives = 151/344 (43%), Gaps = 38/344 (11%)
Query: 49 RLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVVTAHYFPPVTI 108
+LHG YE L G+ + L D TGG+TE + + + L L+ + +
Sbjct: 377 KLHGGYENLDGGTTAEALEDFTGGLTEYFDLRKSEKAAVLAALVKGMEMGSLFGCSIDAD 436
Query: 109 ISVFFLSLPTGIRLVKIRLRRSVINIFQVDTTNEPVYLIRLRRPLGHGETPISHIVLDTA 168
++ L G+ S+ I + E L+RLR P G+ + ++
Sbjct: 437 ANIKEAQLRNGLVCGHAY---SITAIHSITYYGEDTTLLRLRNPWGNEKEWNGAWSDGSS 493
Query: 169 LWKTIPQYERDRL--MTASKG-VWMLFSDFQRLFPRIEMVHLDTE----------TSRAE 215
W I + + ++ A G WM F DF F ++E+ +L E +RA
Sbjct: 494 EWSKIDEATKKQIDVQFARDGEFWMSFEDFFSNFTQMEVCNLTAEIFDEIAEMTGVNRAT 553
Query: 216 LSLSEKQKWQMKMHQGGW--KRGVSAGGCRNYVNFFHTNPQVQIMLNEPD---------T 264
++ E+ +W M G W K+G +AGGC N + + NPQ P T
Sbjct: 554 ETVEEEHQWHEIMEDGEWSSKKG-TAGGCNNNPSTYPKNPQFSTFFTAPQSSIEADGNVT 612
Query: 265 VIISLNQHSIMEPKV-------IGFSVYKMPKFLTETA--NQMFFKRIKSTINSQ-YTNS 314
VI+++ Q E + IG S+Y + T + FF + + + + N+
Sbjct: 613 VIVAVLQKYRRELRSKGKDVLPIGVSIYSLGAEGTARSPLTAQFFSQNRPIARTTVFVNT 672
Query: 315 RQVSQRCQLESGAYLIMPTTFEPREEAQFTLRIYSNKPLKMKVL 358
R+V+ R ++ G Y+I+P TF+ ++A+F LR+Y+N LK +L
Sbjct: 673 REVTVRFRVPPGQYVIVPCTFDAYDDAEFLLRVYANGTLKSSLL 716
Score = 42.3 bits (95), Expect = 8e-04
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 11 VGDKWLVSCLGVLYLCKGLFYRVVPADQRMDTSYAGVFRLHGSYEALKYGSLLDGLAD 68
+GD W ++ L + L LFYR+VP +Q +YAG+F ++ YG +D + D
Sbjct: 292 LGDCWFLAALANITLYDALFYRIVPPNQSFTENYAGIFH----FQFWHYGKWVDVVVD 345
>AC024214-10|AAF36080.1| 778|Caenorhabditis elegans Calpain family
protein 7 protein.
Length = 778
Score = 85.4 bits (202), Expect = 8e-17
Identities = 92/329 (27%), Positives = 148/329 (44%), Gaps = 33/329 (10%)
Query: 49 RLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVVTAHYFPPVTI 108
+L+G YE L GS + L D TGG+TE + + + L L+ + +
Sbjct: 447 KLYGGYENLDGGSTAEALEDFTGGLTEFFDISKGDKSTTLAMLVRGMQMGSLFGCSIDAD 506
Query: 109 ISVFFLSLPTGIRLVKIRLRRSVINIFQVDTTNEPVYLIRLRRPLGHGETPISHIVLDTA 168
+V L G LV+ S+ I V+T V L+R+R P G+ + ++
Sbjct: 507 ENVKEAQLTNG--LVRGHAY-SITAIQTVNTYGGQVPLLRIRNPWGNSKEWNGAWSDGSS 563
Query: 169 LWKTIPQYERDRL--MTASKG-VWMLFSDFQRLFPRIEMVHLD-------TETSRAELSL 218
W + +R+++ A G WM F DF F ++E +L +E + E+
Sbjct: 564 EWSQVDPQQREQMGVQFAKDGEFWMSFDDFMTNFTQMECCNLSADVMDEISEMTGVEVHD 623
Query: 219 SEKQKWQMKMHQGGWK-RGVSAGGCRNYVNFFHTNPQV----QIMLNEPD-----TVIIS 268
+K +W K G W R +AGGC+N + + NPQ Q+ ++ + TVI +
Sbjct: 624 KQKHQWVEKSEDGEWNSRQGTAGGCQNNDTYCN-NPQYGTYFQVPMDSVEHDGKCTVIGA 682
Query: 269 LNQHSIMEPKV-------IGFSVYKMPKFLTETANQMFFKRIKSTINSQYTNSRQVSQRC 321
+ Q E + IGFSVYK + K I T + N R+V+ R
Sbjct: 683 VLQKYRRELRTKGLDNLPIGFSVYKADGSGQAIHDVSGQKPIART--KVFINMREVTVRF 740
Query: 322 QLESGAYLIMPTTFEPREEAQFTLRIYSN 350
++ G Y+I+P TF+ ++A F LRI+SN
Sbjct: 741 RVPPGQYVIVPCTFDAHDDASFLLRIFSN 769
Score = 45.6 bits (103), Expect = 8e-05
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 11 VGDKWLVSCLGVLYLCKGLFYRVVPADQRMDTSYAGVFRLHGSYEALKYGSLLDGLAD 68
+GD WL++ + L L LFYRVVP DQ +YAG+F ++ +YG +D + D
Sbjct: 362 LGDCWLLAAVANLTLRDELFYRVVPPDQSFTENYAGIFH----FQFWRYGQWVDVVID 415
>AL132848-5|CAB60389.2| 702|Caenorhabditis elegans Hypothetical
protein Y47H10A.1 protein.
Length = 702
Score = 66.9 bits (156), Expect = 3e-11
Identities = 60/243 (24%), Positives = 109/243 (44%), Gaps = 28/243 (11%)
Query: 132 INIFQVDTTNEPVYLIRLRRPLGHGETPISHIVLDTALWKTIPQYERDRLMTASKG-VWM 190
+N+ + + P LIR+R P G + + W + + +R+ G WM
Sbjct: 437 VNLMETEWEKAP--LIRIRSPWGKVKWK-GDFCYRSHRWFGLDKEKRESFRIKEDGEFWM 493
Query: 191 LFSDFQRLFPRIEMVHLDTETSRAELSLSE-------KQKWQMKMHQGGWKRGV-SAGGC 242
DF F + +L +T ++E Q+W +G W + +AGGC
Sbjct: 494 SLKDFMVEFTDVYCCNLSADTMHEVEKMTEVKVMEHQSQQWIQASFEGEWSSRIGTAGGC 553
Query: 243 RNYVNFFHTNPQVQIMLNEPD--------TVIISLNQ----HSI---MEPKVIGFSVYKM 287
++ + F TN Q +I D T+I +L Q H + +E +IG VY+M
Sbjct: 554 DDH-DTFCTNLQYEIHFRATDSYDSNHKCTIIAALFQKNRDHCVYKGLELFLIGLLVYEM 612
Query: 288 PKFLTETANQMFFKRIKSTINSQYTNSRQVSQRCQLESGAYLIMPTTFEPREEAQFTLRI 347
P + +M + + + +SR+ + R + G Y+I+P+T++P ++ +F LRI
Sbjct: 613 PGPNEKVTPEMVKSQTPIADSKLFKDSREANIRFTVPLGHYVIVPSTYDPDQDGEFLLRI 672
Query: 348 YSN 350
++N
Sbjct: 673 FTN 675
Score = 39.9 bits (89), Expect = 0.004
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 13 DKWLVSCLGVLYLCKGLFYRVVPADQRMDTSYAGVFRLHGSYEALKYGSLLDGLAD 68
++W +S L L LFYRVVP DQ YAG+F ++ +YG +D + D
Sbjct: 269 NRWFLSGAANLSLRDELFYRVVPPDQSFTEKYAGIFH----FQFWRYGEWVDVVID 320
>Z82277-1|CAB05248.1| 648|Caenorhabditis elegans Hypothetical
protein LLC1.1 protein.
Length = 648
Score = 56.4 bits (130), Expect = 4e-08
Identities = 55/179 (30%), Positives = 76/179 (42%), Gaps = 10/179 (5%)
Query: 189 WMLFSDFQRLFPRIEMVHLDTETSRAELSLS-EKQKWQMKMHQGGWKRGVS---AGGCRN 244
WM + F F I + L TS S S ++Q + G K G AGGC N
Sbjct: 334 WMPWESFVHYFTDISLCQL-FNTSVFSFSRSYDEQIVFSEWTTNGKKSGAPDDRAGGCHN 392
Query: 245 YVNFFHTNPQVQIMLNEPD-TVIISLNQHSIME--PKVIGFSVYKMPKFLTETANQMFFK 301
+ F NPQ + P+ +V+ +L Q+ E K F M E Q
Sbjct: 393 FKATFCNNPQYIFDIPSPNCSVMFALIQNDPSEGLKKREPFVTIGMHVMKVENNRQYRVH 452
Query: 302 RIKSTIN-SQYTNSRQVSQRCQ-LESGAYLIMPTTFEPREEAQFTLRIYSNKPLKMKVL 358
I S Y + R V Q L G YL++PTTF P+E+ F LR+YS++ + L
Sbjct: 453 TAMHPIAISDYASGRSVYLHLQSLPRGRYLLIPTTFAPKEQTLFMLRVYSDEHIHFSPL 511
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 49 RLHGSYEALKYGSLLDGLADLTGGITESI 77
+L+G YE L G L D L D++GG+ E++
Sbjct: 169 KLYGCYENLVGGHLSDALQDVSGGVAETL 197
>U12921-1|AAB60256.1| 648|Caenorhabditis elegans sex determination
protein.
Length = 648
Score = 56.4 bits (130), Expect = 4e-08
Identities = 55/179 (30%), Positives = 76/179 (42%), Gaps = 10/179 (5%)
Query: 189 WMLFSDFQRLFPRIEMVHLDTETSRAELSLS-EKQKWQMKMHQGGWKRGVS---AGGCRN 244
WM + F F I + L TS S S ++Q + G K G AGGC N
Sbjct: 334 WMPWESFVHYFTDISLCQL-FNTSVFSFSRSYDEQIVFSEWTTNGKKSGAPDDRAGGCHN 392
Query: 245 YVNFFHTNPQVQIMLNEPD-TVIISLNQHSIME--PKVIGFSVYKMPKFLTETANQMFFK 301
+ F NPQ + P+ +V+ +L Q+ E K F M E Q
Sbjct: 393 FKATFCNNPQYIFDIPSPNCSVMFALIQNDPSEGLKKREPFVTIGMHVMKVENNRQYRVH 452
Query: 302 RIKSTIN-SQYTNSRQVSQRCQ-LESGAYLIMPTTFEPREEAQFTLRIYSNKPLKMKVL 358
I S Y + R V Q L G YL++PTTF P+E+ F LR+YS++ + L
Sbjct: 453 TAMHPIAISDYASGRSVYLHLQSLPRGRYLLIPTTFAPKEQTLFMLRVYSDEHIHFSPL 511
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 49 RLHGSYEALKYGSLLDGLADLTGGITESI 77
+L+G YE L G L D L D++GG+ E++
Sbjct: 169 KLYGCYENLVGGHLSDALQDVSGGVAETL 197
>AC024763-6|AAO12403.1| 603|Caenorhabditis elegans Calpain family
protein 4, isoform b protein.
Length = 603
Score = 47.2 bits (107), Expect = 3e-05
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 16/198 (8%)
Query: 49 RLHGSYEALKYGSLLDGLADLTGGITESIVMPELSDGSALRTLLDTSSVVTAHYFPPVTI 108
+LHG YE L G+ + L D TGG+TE + + + L L+ + +
Sbjct: 377 KLHGGYENLDGGTTAEALEDFTGGLTEYFDLRKSEKAAVLAALVKGMEMGSLFGCSIDAD 436
Query: 109 ISVFFLSLPTGIRLVKIRLRRSVINIFQVDTTNEPVYLIRLRRPLGHGETPISHIVLDTA 168
++ L G+ S+ I + E L+RLR P G+ + ++
Sbjct: 437 ANIKEAQLRNGLVCGHAY---SITAIHSITYYGEDTTLLRLRNPWGNEKEWNGAWSDGSS 493
Query: 169 LWKTIPQYERDRL--MTASKG-VWMLFSDFQRLFPRIEMVHLDTE----------TSRAE 215
W I + + ++ A G WM F DF F ++E+ +L E +RA
Sbjct: 494 EWSKIDEATKKQIDVQFARDGEFWMSFEDFFSNFTQMEVCNLTAEIFDEIAEMTGVNRAT 553
Query: 216 LSLSEKQKWQMKMHQGGW 233
++ E+ +W M G W
Sbjct: 554 ETVEEEHQWHEIMEDGEW 571
Score = 42.3 bits (95), Expect = 8e-04
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 11 VGDKWLVSCLGVLYLCKGLFYRVVPADQRMDTSYAGVFRLHGSYEALKYGSLLDGLAD 68
+GD W ++ L + L LFYR+VP +Q +YAG+F ++ YG +D + D
Sbjct: 292 LGDCWFLAALANITLYDALFYRIVPPNQSFTENYAGIFH----FQFWHYGKWVDVVVD 345
>Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical
protein R11A5.1a protein.
Length = 906
Score = 30.7 bits (66), Expect = 2.5
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 255 VQIMLNEPDTVIISLNQHSIMEPKVIGFSVYKMPKFLTETANQMFFKRIKSTINSQY--- 311
V ++LN ++ S N +M V+ + PK + + ++ +QY
Sbjct: 240 VVLLLNSARPLLQSRNCSVVMA--VVQLFYHVAPKAQLSQIARALVRLLRGPRETQYVVL 297
Query: 312 TNSRQVSQRCQLESGAYLIMPTTFEPREEAQFTLRIYSN--KPLKMKVL 358
TN + +R +E G Y I T F+P ++ F S+ K LK+ VL
Sbjct: 298 TNIATICERNPVEEGTYAISKTMFDPFLKSFFVRSCDSSLVKKLKLHVL 346
>AL117204-2|CAB76734.1| 272|Caenorhabditis elegans Hypothetical
protein Y116A8C.3 protein.
Length = 272
Score = 29.9 bits (64), Expect = 4.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 315 RQVSQRCQLESGAYLIMPTTFEPREEAQFTLRIYSN 350
R R ++ G Y+I+P+T EP F LR++++
Sbjct: 213 RSAVARFDIDPGDYVIIPSTKEPNRCLDFMLRVFAS 248
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.325 0.139 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,324,854
Number of Sequences: 27539
Number of extensions: 515468
Number of successful extensions: 1524
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1473
Number of HSP's gapped (non-prelim): 31
length of query: 510
length of database: 12,573,161
effective HSP length: 85
effective length of query: 425
effective length of database: 10,232,346
effective search space: 4348747050
effective search space used: 4348747050
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 62 (29.1 bits)
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