GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002119-TA|BGIBMGA002119-PA|IPR008957|Fibronectin, type
III-like fold, IPR007110|Immunoglobulin-like, IPR003599|Immunoglobulin
subtype, IPR013162|CD80-like, immunoglobulin C2-set
         (664 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       29   0.52 

>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 28.7 bits (61), Expect = 0.52
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 5/80 (6%)

Query: 183 TFVCKVADDQPKTLVYWRRNGAVI---KRAEAARSGLLIAEIRVVNATRNELDAHYECLA 239
           TF+ +V    P T   WR    +     R  + R G  + ++ + +  +NE       + 
Sbjct: 385 TFINRV--QAPTTPAKWRPTVNIADYENRPTSTRPGNNLNDVLIFSRFQNETMEQTTVVP 442

Query: 240 QNADVTDPLTASFVVKMFLP 259
           + AD T+PLT     + F+P
Sbjct: 443 EAADTTEPLTIETTSQSFVP 462


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.135    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,288
Number of Sequences: 2123
Number of extensions: 29167
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 26
Number of HSP's gapped (non-prelim): 1
length of query: 664
length of database: 516,269
effective HSP length: 68
effective length of query: 596
effective length of database: 371,905
effective search space: 221655380
effective search space used: 221655380
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)