Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002119-TA|BGIBMGA002119-PA|IPR008957|Fibronectin, type
III-like fold, IPR007110|Immunoglobulin-like, IPR003599|Immunoglobulin
subtype, IPR013162|CD80-like, immunoglobulin C2-set
(664 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 36 8e-04
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 36 8e-04
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 28 0.21
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 25 2.0
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 8.0
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 36.3 bits (80), Expect = 8e-04
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 26/139 (18%)
Query: 114 DGTALLLKHVSDDDAGTYRCRVHYQASPSVDHVVDLKLVDSPGAPKIYNENNELIKLGYV 173
+GT LLL+HV +D G Y C+ + VV LK+ SP + + L+
Sbjct: 768 NGT-LLLQHVKEDREGFYLCQASNGIGSGIGKVVQLKVNSSP----YFAAPSRLV----- 817
Query: 174 GPISLGANLTFVCKVADDQPKTLVYWRRNGAV-----------IKRAEAARSGLLIAEIR 222
+ G T C+V D P T V W + G + +KR E G +IA+++
Sbjct: 818 -TVKKGDTATLHCEVHGDTPVT-VTWLKGGKIELNPSTNYRVTVKR-EVTPDG-VIAQLQ 873
Query: 223 VVNATRNELDAHYECLAQN 241
+ +A ++ A++ C A N
Sbjct: 874 ISSAEASDSGAYF-CQASN 891
Score = 28.7 bits (61), Expect = 0.16
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 426 REEDLGQLVCRATNSFGEQKRPCTYTITPGGAPISPECVVIRSYPNVLRVQCKKAWNGGR 485
+ +D G C+ N+ G K YT+T P +P V S + + + K NGG
Sbjct: 1375 QSQDGGDYTCQVENAQGNDK--LHYTLTVQVPPSAPVLYVTSSTSSSILLHWKSGHNGGA 1432
Query: 486 PQT 488
T
Sbjct: 1433 SLT 1435
Score = 27.1 bits (57), Expect = 0.49
Identities = 71/342 (20%), Positives = 131/342 (38%), Gaps = 43/342 (12%)
Query: 115 GTALLLKHVSDDDAGTYRCRVHYQASPSVDHVVDLKLVDSPGAPKIYNENNELIKLGYVG 174
G+ L L+ V+ +D G YRC ++P + +++L+ + AP L+
Sbjct: 292 GSVLALEAVTLEDNGIYRCSA---SNPGGEASAEIRLIVT--APLHVEVTPPLLS----- 341
Query: 175 PISLGANLTFVCKVADDQPKT---LVYWRRNGAVIKRAEAARSGLLIAEIRVVNATRNEL 231
+ LG N F C+V+ P+ + W ++G + +E+ +N E
Sbjct: 342 -VHLGGNAEFRCEVS-THPQAGPHFITWYKDGRQLPGTGRQ------SELLRLNGINRED 393
Query: 232 DAHYECLAQNADVTDPLTASFVVKM-FLPPMRVEIRLNNNLNFEAGQXXXXXXXXXXXXX 290
Y+C+ + ++ D AS +++ PPM + + L + G
Sbjct: 394 RGMYQCIVRRSE-GDTAQASAELQLGNAPPMLLYSFIEQTL--QPGP-AVSLKCSAAGNP 449
Query: 291 XXSITWHLGDNMLRPSVHKELHDGNY------TVSSLTLAPSLRDNKHDLTCRAHNSHLP 344
+TW L D P+ + G Y +S + ++ + ++ + +C A N
Sbjct: 450 TPQVTWAL-DGFALPT-NGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSCMAENR--- 504
Query: 345 NDLFENKVKLNVGFRPFCLSNRQDDVGAVHGEAETVTCVVEASPEPMQFSWTFADSKTLY 404
+ +LNV P+ V AV GE + C V P + W A+ +
Sbjct: 505 AGKVTHAARLNVYGLPYI--RLIPKVTAVAGETLRLKCPVAGYPIE-EIKWERANRELPD 561
Query: 405 TSVKKVSGHNHRYMSSLTWKPREEDLGQLVCRATNSFGEQKR 446
+KV ++S+ ++ D G C A N G R
Sbjct: 562 DLRQKVLPDGTLVITSV---QKKGDAGVYTCSARNKQGHSAR 600
Score = 26.2 bits (55), Expect = 0.86
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 118 LLLKHVSDDDAGTYRCRV-HYQASPSVDHVVDLKLVDSPGAPKIY--NENNELIKLGYVG 174
L+L ++ D G Y C+V + Q + + + + +++ P AP +Y + + I L +
Sbjct: 1369 LMLSNLQSQDGGDYTCQVENAQGNDKLHYTLTVQV--PPSAPVLYVTSSTSSSILLHWKS 1426
Query: 175 PISLGANLT 183
+ GA+LT
Sbjct: 1427 GHNGGASLT 1435
Score = 25.8 bits (54), Expect = 1.1
Identities = 22/91 (24%), Positives = 33/91 (36%), Gaps = 12/91 (13%)
Query: 114 DGTALLLKHVSDDDAGTYRCRVHYQASPSVDHVVDLKLVDSP-GAPKIYNENNELIKLGY 172
DGT ++ DAG Y C + S D+ ++ P P + E
Sbjct: 570 DGTLVITSVQKKGDAGVYTCSARNKQGHSARRSGDVAVIVPPIIEPFTFQEG-------- 621
Query: 173 VGPISLGANLTFVCKVADDQPKTLVYWRRNG 203
+S G VC VA P + W ++G
Sbjct: 622 ---LSEGMRTRTVCGVAAGDPPLTISWLKDG 649
Score = 25.4 bits (53), Expect = 1.5
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Query: 368 DDVGAVH---GEAETVTCVVEASPEPMQFSWTFADSKTLYTSVKKVSGHNHRYMSSLTWK 424
++ G VH E+ ++ CV +A P P ++ W ++T + +SG R + S+
Sbjct: 242 ENSGVVHVAQDESTSLVCVAQACPTP-EYRWY---AQTGSEPMLVLSGPRTRLLGSVLAL 297
Query: 425 PRE--EDLGQLVCRATNSFGEQKRPCTYTIT 453
ED G C A+N GE +T
Sbjct: 298 EAVTLEDNGIYRCSASNPGGEASAEIRLIVT 328
Score = 23.4 bits (48), Expect = 6.1
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 110 GSCHDGTALLLKHVSDDDAGTYRCRVHYQASPSVDHVVDLKLVDSP 155
G+ L L ++ +D G Y+C V + +L+L ++P
Sbjct: 376 GTGRQSELLRLNGINREDRGMYQCIVRRSEGDTAQASAELQLGNAP 421
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 36.3 bits (80), Expect = 8e-04
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 26/139 (18%)
Query: 114 DGTALLLKHVSDDDAGTYRCRVHYQASPSVDHVVDLKLVDSPGAPKIYNENNELIKLGYV 173
+GT LLL+HV +D G Y C+ + VV LK+ SP + + L+
Sbjct: 764 NGT-LLLQHVKEDREGFYLCQASNGIGSGIGKVVQLKVNSSP----YFAAPSRLV----- 813
Query: 174 GPISLGANLTFVCKVADDQPKTLVYWRRNGAV-----------IKRAEAARSGLLIAEIR 222
+ G T C+V D P T V W + G + +KR E G +IA+++
Sbjct: 814 -TVKKGDTATLHCEVHGDTPVT-VTWLKGGKIELNPSTNYRVTVKR-EVTPDG-VIAQLQ 869
Query: 223 VVNATRNELDAHYECLAQN 241
+ +A ++ A++ C A N
Sbjct: 870 ISSAEASDSGAYF-CQASN 887
Score = 28.7 bits (61), Expect = 0.16
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 426 REEDLGQLVCRATNSFGEQKRPCTYTITPGGAPISPECVVIRSYPNVLRVQCKKAWNGGR 485
+ +D G C+ N+ G K YT+T P +P V S + + + K NGG
Sbjct: 1371 QSQDGGDYTCQVENAQGNDK--LHYTLTVQVPPSAPVLYVTSSTSSSILLHWKSGHNGGA 1428
Query: 486 PQT 488
T
Sbjct: 1429 SLT 1431
Score = 28.3 bits (60), Expect = 0.21
Identities = 31/164 (18%), Positives = 59/164 (35%), Gaps = 16/164 (9%)
Query: 114 DGTALLLKHVSDDDAGTYRCRVHYQASPSVDHVVDLKLVDSPGAPKIYNENNELIKLGYV 173
DGT ++ DAG Y C + S D+ ++ P + +
Sbjct: 570 DGTLVITSVQKKGDAGVYTCSARNKQGHSARRSGDVAVIVPPKISPFTADRD-------- 621
Query: 174 GPISLGANLTFVCKVADDQPKTLVYWRRNGAVIKRAEAARSGLL--IAEIRVVNATRNEL 231
+ LG T C V + W ++G + +E + I ++ +
Sbjct: 622 --LHLGERTTLTCSVTRGDLPLSISWLKDGRAMGPSERVHVTNMDQYNSILMIEHLSPDH 679
Query: 232 DAHYECLAQN--ADV--TDPLTASFVVKMFLPPMRVEIRLNNNL 271
+ +Y C+A+N A+V T L + + P V + N ++
Sbjct: 680 NGNYSCVARNLAAEVSHTQRLVVHVPPRWIVEPTDVSVERNKHV 723
Score = 27.1 bits (57), Expect = 0.49
Identities = 71/342 (20%), Positives = 131/342 (38%), Gaps = 43/342 (12%)
Query: 115 GTALLLKHVSDDDAGTYRCRVHYQASPSVDHVVDLKLVDSPGAPKIYNENNELIKLGYVG 174
G+ L L+ V+ +D G YRC ++P + +++L+ + AP L+
Sbjct: 292 GSVLALEAVTLEDNGIYRCSA---SNPGGEASAEIRLIVT--APLHVEVTPPLLS----- 341
Query: 175 PISLGANLTFVCKVADDQPKT---LVYWRRNGAVIKRAEAARSGLLIAEIRVVNATRNEL 231
+ LG N F C+V+ P+ + W ++G + +E+ +N E
Sbjct: 342 -VHLGGNAEFRCEVS-THPQAGPHFITWYKDGRQLPGTGRQ------SELLRLNGINRED 393
Query: 232 DAHYECLAQNADVTDPLTASFVVKM-FLPPMRVEIRLNNNLNFEAGQXXXXXXXXXXXXX 290
Y+C+ + ++ D AS +++ PPM + + L + G
Sbjct: 394 RGMYQCIVRRSE-GDTAQASAELQLGNAPPMLLYSFIEQTL--QPGP-AVSLKCSAAGNP 449
Query: 291 XXSITWHLGDNMLRPSVHKELHDGNY------TVSSLTLAPSLRDNKHDLTCRAHNSHLP 344
+TW L D P+ + G Y +S + ++ + ++ + +C A N
Sbjct: 450 TPQVTWAL-DGFALPT-NGRFMIGQYVTVHGDVISHVNISHVMVEDGGEYSCMAENR--- 504
Query: 345 NDLFENKVKLNVGFRPFCLSNRQDDVGAVHGEAETVTCVVEASPEPMQFSWTFADSKTLY 404
+ +LNV P+ V AV GE + C V P + W A+ +
Sbjct: 505 AGKVTHAARLNVYGLPYI--RLIPKVTAVAGETLRLKCPVAGYPIE-EIKWERANRELPD 561
Query: 405 TSVKKVSGHNHRYMSSLTWKPREEDLGQLVCRATNSFGEQKR 446
+KV ++S+ ++ D G C A N G R
Sbjct: 562 DLRQKVLPDGTLVITSV---QKKGDAGVYTCSARNKQGHSAR 600
Score = 26.2 bits (55), Expect = 0.86
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 118 LLLKHVSDDDAGTYRCRV-HYQASPSVDHVVDLKLVDSPGAPKIY--NENNELIKLGYVG 174
L+L ++ D G Y C+V + Q + + + + +++ P AP +Y + + I L +
Sbjct: 1365 LMLSNLQSQDGGDYTCQVENAQGNDKLHYTLTVQV--PPSAPVLYVTSSTSSSILLHWKS 1422
Query: 175 PISLGANLT 183
+ GA+LT
Sbjct: 1423 GHNGGASLT 1431
Score = 25.4 bits (53), Expect = 1.5
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Query: 368 DDVGAVH---GEAETVTCVVEASPEPMQFSWTFADSKTLYTSVKKVSGHNHRYMSSLTWK 424
++ G VH E+ ++ CV +A P P ++ W ++T + +SG R + S+
Sbjct: 242 ENSGVVHVAQDESTSLVCVAQACPTP-EYRWY---AQTGSEPMLVLSGPRTRLLGSVLAL 297
Query: 425 PRE--EDLGQLVCRATNSFGEQKRPCTYTIT 453
ED G C A+N GE +T
Sbjct: 298 EAVTLEDNGIYRCSASNPGGEASAEIRLIVT 328
Score = 24.6 bits (51), Expect = 2.6
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 375 GEAETVTCVVEASPEPMQFSWTFADSKTLYTSVKKVSGHNHRYMSSLTWKPREED-LGQL 433
GE T+TC V P+ SW D + + S + + +Y S L + D G
Sbjct: 625 GERTTLTCSVTRGDLPLSISW-LKDGRAMGPSERVHVTNMDQYNSILMIEHLSPDHNGNY 683
Query: 434 VCRATNSFGE 443
C A N E
Sbjct: 684 SCVARNLAAE 693
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 28.3 bits (60), Expect = 0.21
Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 6/81 (7%)
Query: 375 GEAETVTCVVEASPEPMQFSWTFADSKTLYTS---VKKVSGHNHRYMSSLTWKPREEDLG 431
GE + C+V P+ W++ + +S KKV+ M S+ G
Sbjct: 598 GEFANLQCIVPTGDLPLNIRWSYPGEEMGGSSGVLAKKVADRVSMLMISVI---TARHAG 654
Query: 432 QLVCRATNSFGEQKRPCTYTI 452
+ VC A N+ G T T+
Sbjct: 655 EYVCTAENAAGTASHSTTLTV 675
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 25.0 bits (52), Expect = 2.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 114 DGTALLLKHVSDDDAGTYRCR 134
+GT L++K+V D G Y C+
Sbjct: 455 NGTKLIIKNVDYADTGAYMCQ 475
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.0 bits (47), Expect = 8.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 45 VVVLRAVRGRNARLPCGQG 63
V +L VR ARLP G+G
Sbjct: 656 VTILALVRDATARLPNGEG 674
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.320 0.135 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,744
Number of Sequences: 429
Number of extensions: 8584
Number of successful extensions: 36
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 21
length of query: 664
length of database: 140,377
effective HSP length: 62
effective length of query: 602
effective length of database: 113,779
effective search space: 68494958
effective search space used: 68494958
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)
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