Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002117-TA|BGIBMGA002117-PA|undefined
(151 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 24 0.65
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 24 0.65
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 23 0.86
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 23 1.5
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 23 1.5
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 22 2.6
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 21 3.5
Z69735-1|CAA93623.1| 162|Tribolium castaneum initiation factor ... 21 4.6
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 21 4.6
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 21 4.6
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 23.8 bits (49), Expect = 0.65
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
Query: 39 CRECRLNRCS----RKESNHNQCNPRESNRNR 66
CR CRL +C K++ ++ PR S R
Sbjct: 92 CRACRLKKCQNVGMNKDAVQHERGPRNSTLRR 123
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 23.8 bits (49), Expect = 0.65
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
Query: 39 CRECRLNRCS----RKESNHNQCNPRESNRNR 66
CR CRL +C K++ ++ PR S R
Sbjct: 92 CRACRLKKCQNVGMNKDAVQHERGPRNSTLRR 123
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 23.4 bits (48), Expect = 0.86
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 37 LPCRECRLNRCSRKESNHNQCNPR 60
L CR+ +RC+ +ES+ + PR
Sbjct: 74 LNCRDLPNSRCNSRESSDSLVQPR 97
Score = 21.8 bits (44), Expect = 2.6
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 78 NPKECNLNRCNLRESSHNRYNPKESNRNRCNPR 110
+P+ + + N R+ ++R N +ES+ + PR
Sbjct: 65 SPRSISEDPLNCRDLPNSRCNSRESSDSLVQPR 97
Score = 20.2 bits (40), Expect = 8.0
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 54 HNQCNPRESNRNRCNPKEP 72
+++CN RES+ + P+ P
Sbjct: 81 NSRCNSRESSDSLVQPRCP 99
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 22.6 bits (46), Expect = 1.5
Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Query: 25 LTPMQLAWHRSYLPCRECRLNRCSRKESNHNQCNPRESNRNRCNPKEPHCNLCNPKECNL 84
L ++ +HRS CR R+ Q NR KE + PK +
Sbjct: 97 LVELEREFHRSKYLCRPRRIQMAQNLNLTERQIKIWFQNRRMKFKKEEKNKVVTPK-TSP 155
Query: 85 NRCNL---RESSHNRYNPK 100
N ++ SS+N +PK
Sbjct: 156 NEASMSPQSTSSNNSASPK 174
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 22.6 bits (46), Expect = 1.5
Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Query: 25 LTPMQLAWHRSYLPCRECRLNRCSRKESNHNQCNPRESNRNRCNPKEPHCNLCNPKECNL 84
L ++ +HRS CR R+ Q NR KE + PK +
Sbjct: 117 LVELEREFHRSKYLCRPRRIQMAQNLNLTERQIKIWFQNRRMKFKKEEKNKVVTPK-TSP 175
Query: 85 NRCNL---RESSHNRYNPK 100
N ++ SS+N +PK
Sbjct: 176 NEASMSPQSTSSNNSASPK 194
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 21.8 bits (44), Expect = 2.6
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 39 CRECRLNRC 47
C+ECRL +C
Sbjct: 240 CQECRLKKC 248
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 21.4 bits (43), Expect = 3.5
Identities = 9/39 (23%), Positives = 19/39 (48%)
Query: 43 RLNRCSRKESNHNQCNPRESNRNRCNPKEPHCNLCNPKE 81
+L+ C+R +N+ +P R + P ++ NP +
Sbjct: 251 QLSTCTRTTLKNNRASPYPMQRPKSASLSPPPHVYNPPD 289
>Z69735-1|CAA93623.1| 162|Tribolium castaneum initiation factor
5-like protein protein.
Length = 162
Score = 21.0 bits (42), Expect = 4.6
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 91 ESSHNRYNPKESNRNRCNPRVSNHNQCKPKESKRNRCNPRDCN 133
ES+H N NP V + + K SKR++ D N
Sbjct: 46 ESNHKLVTFILKNPPNLNPAVQGSSLTEGKRSKRSKRPNGDTN 88
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 21.0 bits (42), Expect = 4.6
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 64 RNRCNPKEPHCNLCNPKECNLNRCNLRESSHN 95
RN K CN C+ N + N SH+
Sbjct: 251 RNHAGSKPFQCNKCDYTCVNKSMLNSHMKSHS 282
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 21.0 bits (42), Expect = 4.6
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 64 RNRCNPKEPHCNLCNPKECNLNRCNLRESSHN 95
RN K CN C+ N + N SH+
Sbjct: 9 RNHAGSKPFQCNKCDYTCVNKSMLNSHMKSHS 40
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.321 0.135 0.476
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,107
Number of Sequences: 317
Number of extensions: 2053
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of query: 151
length of database: 114,650
effective HSP length: 52
effective length of query: 99
effective length of database: 98,166
effective search space: 9718434
effective search space used: 9718434
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.4 bits)
S2: 40 (20.2 bits)
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