Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002117-TA|BGIBMGA002117-PA|undefined
(151 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 34 0.056
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 33 0.074
03_06_0317 + 33097257-33097336,33098500-33098926,33100007-331000... 33 0.074
11_01_0374 - 2843405-2843508,2844134-2844239,2844327-2844409,284... 31 0.30
06_02_0211 - 13043968-13044646,13044752-13045037,13045903-130459... 31 0.40
01_06_0486 - 29729333-29729356,29729856-29730106,29730364-297304... 29 1.2
03_01_0105 - 836347-836769,837740-837937 29 1.6
01_06_0969 - 33472588-33474480,33475543-33475623,33475692-334757... 29 1.6
10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296 29 2.1
07_03_1245 + 25154586-25155040,25155519-25155604,25155690-25155733 28 3.7
02_02_0344 + 9182775-9183539,9195912-9196028 28 3.7
11_06_0085 - 19905784-19906510,19907428-19907557,19907739-19907874 27 4.9
03_02_0245 + 6754381-6754506,6756099-6756188,6756806-6756921,675... 27 4.9
02_04_0364 + 22374735-22374749,22374903-22375076,22377858-223779... 27 4.9
12_02_0521 - 19955475-19956076,19957146-19958403 27 6.4
10_01_0109 + 1338525-1338590,1338744-1339325 27 6.4
02_04_0413 + 22681957-22682035,22682253-22682788 27 6.4
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 27 6.4
12_02_0517 - 19930197-19931585,19932064-19932253,19933887-19934044 27 8.5
03_02_0701 - 10523053-10523220,10523802-10523916,10524102-105241... 27 8.5
02_05_0125 + 26046448-26046654,26046754-26047149,26047557-26047763 27 8.5
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 33.9 bits (74), Expect = 0.056
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 31 AWHRSYLPCRECRLNRCSR--KESNHNQCNPRESNRNRCNPKEPHCNLCNPKECNLNRCN 88
++ RS P R+ R R SR ++S + +PR+S R +P++ +P++ R +
Sbjct: 163 SYSRSQSPRRDSRNERRSRSPRDSRSPRGSPRDSRSPRGSPRDSRSPKGSPRDTQSPRGS 222
Query: 89 LRESSHNRYNPKESNRNRCNPRVSNHNQCKPKESK 123
R+S R + N +P + P++S+
Sbjct: 223 PRDSRSPRRSASPPNGRNRSPTPNASRSPAPRDSR 257
Score = 32.7 bits (71), Expect = 0.13
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 90 RESSHNRYNPKESNRNRCNPRVSNHNQCKPKESKRNRCNPRDCNRSHRDYGP 141
R+S R +P++S R +PR S + P++++ R +PRD R P
Sbjct: 184 RDSRSPRGSPRDSRSPRGSPRDSRSPKGSPRDTQSPRGSPRDSRSPRRSASP 235
Score = 30.3 bits (65), Expect = 0.69
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 45 NRCSRKESNHNQC-NPRES-NRNRCNPKE---PHCNLCNPKECNLNRCNLRESSHNRYNP 99
NRC R+ ++++ +PR +R R + + +P+ + N R +R +P
Sbjct: 131 NRCYRRGRSYSRSPSPRRGRSRGRSYSRSRSRSYSRSQSPRRDSRNERRSRSPRDSR-SP 189
Query: 100 KESNRNRCNPRVSNHNQCKPKESKRNRCNPRDCNRSHR 137
+ S R+ +PR S + PK S R+ +PR R R
Sbjct: 190 RGSPRDSRSPRGSPRDSRSPKGSPRDTQSPRGSPRDSR 227
Score = 29.5 bits (63), Expect = 1.2
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 48 SRKESNHNQCNPRESNRNRCNPKEPHCNLCNPKECNLNRCNLRESSHNRYNPKESNRNRC 107
SR S +PR +RN + +P++ R + R+S R +P++S +
Sbjct: 159 SRSRSYSRSQSPRRDSRNERRSR-------SPRDSRSPRGSPRDSRSPRGSPRDSRSPKG 211
Query: 108 NPRVSNHNQCKPKES---KRNRCNPRDCNRS 135
+PR + + P++S +R+ P NRS
Sbjct: 212 SPRDTQSPRGSPRDSRSPRRSASPPNGRNRS 242
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 33.5 bits (73), Expect = 0.074
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 90 RESSHNRYNPKESNRNRCNPRVSNHNQ-CKPKESKRNRCNPR 130
RE +H N KE NR+R N + ++N+ CKP E +R + R
Sbjct: 455 RERTHIDENDKEGNRDRGNQKHEDYNRYCKPGERSSSRHDDR 496
Score = 30.3 bits (65), Expect = 0.69
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 34 RSYLPCRECRLNRCSRKESNHNQCNPRESNRNRCNPK-EPHCNLCNPKECNLNRCNLRES 92
RS LP R R +R SR E H N +E NR+R N K E + C P E + +R + R
Sbjct: 441 RSGLPPRGDR-DRISR-ERTHIDENDKEGNRDRGNQKHEDYNRYCKPGERSSSRHDDRGY 498
Query: 93 SHNRYNPK 100
S + K
Sbjct: 499 SKHESRSK 506
>03_06_0317 +
33097257-33097336,33098500-33098926,33100007-33100078,
33100490-33100600,33100973-33101173,33102157-33102222
Length = 318
Score = 33.5 bits (73), Expect = 0.074
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 58 NPRESNRNRCNPKEPHCNLCNPKECNLNRCNLRESSHNRYNPKESNRNRCNPR 110
+P+ + R C+ P P+ N + R H+ NPK++NR +C+P+
Sbjct: 238 SPKFTRRRSCSDAPP-----TPEAANTTAASSRSHRHSIANPKDANRVQCSPK 285
Score = 27.9 bits (59), Expect = 3.7
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 48 SRKESNHNQCNPRESNRNRCNPK 70
S + H+ NP+++NR +C+PK
Sbjct: 263 SSRSHRHSIANPKDANRVQCSPK 285
Score = 27.5 bits (58), Expect = 4.9
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 99 PKESNRNRCNPRVSNHNQCKPKESKRNRCNPRD 131
P+ +N + R H+ PK++ R +C+P++
Sbjct: 254 PEAANTTAASSRSHRHSIANPKDANRVQCSPKN 286
>11_01_0374 -
2843405-2843508,2844134-2844239,2844327-2844409,
2844886-2845078,2845527-2845662,2846185-2846264,
2846348-2846932,2847058-2847126,2847203-2847347,
2847442-2847542,2848208-2849066,2849397-2849536,
2849606-2849783,2849885-2850287,2850770-2850833,
2851223-2851278,2851470-2851572
Length = 1134
Score = 31.5 bits (68), Expect = 0.30
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 48 SRKESNHNQCNPRESNRNRCNPKEPHCNLCNPKECNLNRCNLRESSHNRYNPKESNRNRC 107
S++ + ++ P E ++ C+ E C N + L R N RY K SN+
Sbjct: 511 SQEWQDTDEAKPNEGSQVDCSSTEKPCETINNTKAQLKRSNSTPDIEKRYLAK-SNQTMV 569
Query: 108 NPRVSNHNQ 116
+ ++ NQ
Sbjct: 570 SSEIARKNQ 578
>06_02_0211 -
13043968-13044646,13044752-13045037,13045903-13045979,
13046039-13046139,13046348-13046412,13048296-13048581
Length = 497
Score = 31.1 bits (67), Expect = 0.40
Identities = 25/89 (28%), Positives = 31/89 (34%), Gaps = 8/89 (8%)
Query: 58 NPRESNRNRCNPKEPHCNLCNPKECNLNRCNLRESSHNRY-NPKESNRNRCNPRVSNHNQ 116
NP N N + HCN CN + C S H Y NP P ++
Sbjct: 270 NPNCGNLNFA--RRTHCNNCNKYRYSREVCEPGHSPHRDYVNPPRGPARNLGP----SDR 323
Query: 117 CKPKESKRNRCNPRDCNRSHRDYGPCRLP 145
P+E R PR + Y P R P
Sbjct: 324 APPREMARYGSPPRGWGSDPKGY-PARSP 351
>01_06_0486 -
29729333-29729356,29729856-29730106,29730364-29730466,
29730571-29730663,29730773-29730905,29731184-29731272,
29731385-29731553,29731930-29732016,29732388-29732506,
29732554-29732706
Length = 406
Score = 29.5 bits (63), Expect = 1.2
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Query: 42 CRLNRCSRKESNHNQCNPRESNRNRCNPKEPHCNLCNPKECNLNRC 87
CRL C K N C +S N C + HC+ C + N C
Sbjct: 348 CRL--CGGKGHNSRTCGKPKSE-NECQRQPRHCSQCGERGHNRRNC 390
>03_01_0105 - 836347-836769,837740-837937
Length = 206
Score = 29.1 bits (62), Expect = 1.6
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 18 VPALQHGLTPMQLAWHRSYLPCRE-----CRLN-RCSRKESNHNQCNPRESNRNRC 67
VP QH P++ AW Y P E R+N + R E Q P SN +C
Sbjct: 32 VPVPQHRFAPLKKAWMDIYTPVYEHMKIDIRMNLKARRVELKTRQDTPDVSNLQKC 87
>01_06_0969 -
33472588-33474480,33475543-33475623,33475692-33475740,
33475866-33476281,33477208-33477447
Length = 892
Score = 29.1 bits (62), Expect = 1.6
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 18 VPALQHGLTPMQLAWHRSYLPCRE-----CRLN-RCSRKESNHNQCNPRESNRNRC 67
VP QH P++ AW Y P E R+N + R E Q P SN +C
Sbjct: 46 VPVPQHRFAPLKKAWMDIYTPVYEHMKIDIRMNLKARRVELKTRQDTPDVSNLQKC 101
>10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296
Length = 247
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 39 CREC-RLNRCSRKESNHNQCNP-RESNRNRCN-PKEPHCNLCNPKECNLNRCNLRESSHN 95
C C + + + +N CN R+S N P EP CNLCN C ++ +
Sbjct: 124 CSNCYKPGHLAAECTNEKACNNCRKSGHLARNCPNEPVCNLCNVSGHLARECPKSDAINE 183
Query: 96 RYNP 99
R P
Sbjct: 184 RGGP 187
>07_03_1245 + 25154586-25155040,25155519-25155604,25155690-25155733
Length = 194
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 110 RVSNHNQCKPKESKRNRCNPRDCNRSHRDY 139
R N++QC K+S R C +R RD+
Sbjct: 153 RKGNYSQCMTKQSVRPSCRQTAASRKERDH 182
>02_02_0344 + 9182775-9183539,9195912-9196028
Length = 293
Score = 27.9 bits (59), Expect = 3.7
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 105 NRCNPRVSNHNQCKPKESKRNRCNPRDC 132
N+C P C PK+ KR+R C
Sbjct: 202 NKCGPEEKTGEACPPKKMKRSRTRQAAC 229
>11_06_0085 - 19905784-19906510,19907428-19907557,19907739-19907874
Length = 330
Score = 27.5 bits (58), Expect = 4.9
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 60 RESNRNRCNPKEPHCNLCNPKECNLNRCNLRESSHNRYNPKESNRNRCNPRVSNHNQCKP 119
R + + +P H + + N + +S N YNP SN N N +N++ +
Sbjct: 119 RLQQQQQSHPDHHHHHSFQTTPSSSNAAAVATTSPNYYNPNNSNSNSSNYLHNNNHNLES 178
Query: 120 KES 122
+S
Sbjct: 179 MQS 181
>03_02_0245 +
6754381-6754506,6756099-6756188,6756806-6756921,
6757027-6757435
Length = 246
Score = 27.5 bits (58), Expect = 4.9
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 92 SSHNRYNPKESNRNRCNPRVSNHNQCKPKESKRNRCN-PRDCNRSHRDYGP 141
S H R N + + + + NHNQ KP E + N + P D + D P
Sbjct: 194 SDHQRSNIMATQQQQSS-NTENHNQVKPNEGEPNAVSCPGDDDEEDPDVPP 243
>02_04_0364 +
22374735-22374749,22374903-22375076,22377858-22377935,
22379270-22380407,22380507-22380901,22382230-22382416,
22382872-22382942,22383705-22383755
Length = 702
Score = 27.5 bits (58), Expect = 4.9
Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
Query: 2 MANINGHFQFMPGIVGVPALQHGLTPMQLAWHRSYLPCRECRLNRCSRKESNHNQCNPRE 61
+ANIN + + G Q + +Q+ RS + R + +N CN
Sbjct: 98 LANINKIKELQEQLHGA---QDTVASLQIELQRSNTELEQARSTLAEERRNNLRSCNKIN 154
Query: 62 SNRNRCNPKEPH 73
SN+N + H
Sbjct: 155 SNKNSSSSSRKH 166
>12_02_0521 - 19955475-19956076,19957146-19958403
Length = 619
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 34 RSYLPCRECRLNRCSRKESNHNQC 57
+S LP ECR N CS + N C
Sbjct: 259 QSALPAEECRCNVCSNRNGFCNLC 282
>10_01_0109 + 1338525-1338590,1338744-1339325
Length = 215
Score = 27.1 bits (57), Expect = 6.4
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 7/73 (9%)
Query: 50 KESNHNQCNPRESNRNRCNPKEPHCNLCNPKECNLNRCNLRESSHNRYNPKESNRNRCNP 109
KE H+ + E + RC ++ HC+ K CN++ L + NP R
Sbjct: 128 KEPWHDGLSLEEEHEGRCEDEQTHCSK-RKKPCNVSCSKLSK------NPSRVAGYRSRK 180
Query: 110 RVSNHNQCKPKES 122
H+ K K S
Sbjct: 181 EEPRHSSKKSKPS 193
>02_04_0413 + 22681957-22682035,22682253-22682788
Length = 204
Score = 27.1 bits (57), Expect = 6.4
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Query: 38 PCRE----CRLNRCSRKESNHNQCNPRESNRNRCNPKEPHCNLC 77
PC E C N CS QC P S N P +P C C
Sbjct: 106 PCCESAAGCCCNGCSGGGCGGGQCPPSPSCENHHPPCKPGCCCC 149
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 61 ESNRNRCNPKEPH--CNLCNPKECNLNRCNLRESSHNRYNPKES 102
+ ++ R + K+ H L NP NR L + SHN + PK S
Sbjct: 147 QESKLRAHIKQQHEKGGLQNPGGSATNRSGLADHSHNSHTPKPS 190
>12_02_0517 - 19930197-19931585,19932064-19932253,19933887-19934044
Length = 578
Score = 26.6 bits (56), Expect = 8.5
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 73 HCNLCNPKECNLNRCNLRESSHNRYNPKESNRNRCNPRVSNHNQCKPKESKRNRCN 128
H NL N N N +L E +N + +NRN N ++ C RN C+
Sbjct: 323 HSNLLNEDLPNANHRHLLEIQYNLVIRRNNNRNN-NDEQMHYYSCLCGLCSRNICH 377
>03_02_0701 -
10523053-10523220,10523802-10523916,10524102-10524172,
10524263-10524420,10524497-10524590,10524678-10524766,
10525322-10525419,10525492-10525625,10525714-10525797,
10525903-10526151
Length = 419
Score = 26.6 bits (56), Expect = 8.5
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 33 HRSYLPCRECRLNRCSRKESN--HNQCNPR--ESNRNRCNPKEPHCNLC 77
HR PCR ++ RC SN ++ P+ +S++ C P P C+ C
Sbjct: 148 HRQGNPCRSVKVFRCQLPRSNAFYSSEPPKHNDSDKPLC-PGAPVCHWC 195
>02_05_0125 +
26046448-26046654,26046754-26047149,26047557-26047763
Length = 269
Score = 26.6 bits (56), Expect = 8.5
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 43 RLNRCSRKESNHNQCNPRESNRNRCNPKEPHCNLCNPK 80
R N+ + K + NP S R+ + P C++C K
Sbjct: 34 RANKLAGKHRRFSLLNPSASGRSPTSTTAPLCDICQEK 71
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.321 0.135 0.476
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,214,423
Number of Sequences: 37544
Number of extensions: 208553
Number of successful extensions: 529
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 497
Number of HSP's gapped (non-prelim): 38
length of query: 151
length of database: 14,793,348
effective HSP length: 76
effective length of query: 75
effective length of database: 11,940,004
effective search space: 895500300
effective search space used: 895500300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 56 (26.6 bits)
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