Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002116-TA|BGIBMGA002116-PA|IPR001841|Zinc finger,
RING-type
(418 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL136170-2|CAI19418.1| 1133|Homo sapiens ring finger and CCCH-ty... 518 e-146
AL121983-1|CAI12318.1| 1133|Homo sapiens ring finger and CCCH-ty... 518 e-146
BC044642-1|AAH44642.1| 506|Homo sapiens RC3H2 protein protein. 507 e-143
AL359512-8|CAI94964.1| 1191|Homo sapiens membrane associated DNA... 507 e-143
AF255303-1|AAG00432.1| 1048|Homo sapiens membrane-associated nuc... 507 e-143
AB095945-1|BAC23121.1| 1109|Homo sapiens KIAA2025 protein protein. 481 e-135
AL136170-3|CAI19419.1| 1086|Homo sapiens ring finger and CCCH-ty... 456 e-128
AL136170-1|CAI19417.1| 1094|Homo sapiens ring finger and CCCH-ty... 456 e-128
AL121983-3|CAH70710.1| 1086|Homo sapiens ring finger and CCCH-ty... 456 e-128
AL121983-2|CAH70709.1| 1094|Homo sapiens ring finger and CCCH-ty... 456 e-128
AL359512-9|CAI94965.1| 935|Homo sapiens membrane associated DNA... 396 e-109
AK000308-1|BAA91073.1| 869|Homo sapiens protein ( Homo sapiens ... 293 1e-78
BC011688-1|AAH11688.2| 177|Homo sapiens Unknown (protein for IM... 158 4e-38
BC003154-1|AAH03154.1| 653|Homo sapiens tripartite motif-contai... 44 0.001
AL133284-7|CAB92723.1| 653|Homo sapiens tripartite motif-contai... 44 0.001
AL133284-6|CAI16372.1| 173|Homo sapiens tripartite motif-contai... 44 0.001
BC112154-1|AAI12155.1| 487|Homo sapiens tripartite motif protei... 42 0.004
BC112152-1|AAI12153.1| 487|Homo sapiens tripartite motif protei... 42 0.004
U18543-1|AAA86474.1| 653|Homo sapiens zinc-finger protein protein. 41 0.007
BC053671-1|AAH53671.1| 1056|Homo sapiens SH3RF1 protein protein. 41 0.007
BC024267-1|AAH24267.1| 594|Homo sapiens TRAF7 protein protein. 41 0.007
AY569455-1|AAS68363.1| 670|Homo sapiens TRAF7 protein. 41 0.007
AK021429-1|BAB13822.1| 712|Homo sapiens protein ( Homo sapiens ... 41 0.007
BC025949-1|AAH25949.1| 294|Homo sapiens TRIM4 protein protein. 41 0.009
BC011763-1|AAH11763.1| 294|Homo sapiens TRIM4 protein protein. 41 0.009
AF220024-1|AAG53478.1| 474|Homo sapiens tripartite motif protei... 41 0.009
AF220023-1|AAG53477.1| 500|Homo sapiens tripartite motif protei... 41 0.009
AC011904-3|AAS07396.1| 294|Homo sapiens unknown protein. 41 0.009
AC011904-2|AAS07398.1| 474|Homo sapiens unknown protein. 41 0.009
AC011904-1|AAS07397.1| 500|Homo sapiens unknown protein. 41 0.009
AY081949-1|AAL91072.1| 486|Homo sapiens tripartite motif protei... 40 0.012
AY081948-1|AAL91071.1| 487|Homo sapiens tripartite motif protei... 40 0.012
BC048194-1|AAH48194.1| 755|Homo sapiens tripartite motif-contai... 39 0.029
BC011882-1|AAH11882.1| 379|Homo sapiens TRIM56 protein protein. 39 0.029
BC007372-1|AAH07372.1| 297|Homo sapiens tripartite motif-contai... 39 0.029
BC005847-1|AAH05847.3| 755|Homo sapiens tripartite motif-contai... 39 0.029
AK092927-1|BAC04004.1| 269|Homo sapiens protein ( Homo sapiens ... 39 0.029
AK054802-1|BAB70809.1| 297|Homo sapiens protein ( Homo sapiens ... 39 0.029
AB209243-1|BAD92480.1| 311|Homo sapiens tripartite motif-contai... 39 0.029
DQ301480-1|ABC01033.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301479-1|ABC01032.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301478-1|ABC01031.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301477-1|ABC01030.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301475-1|ABC01028.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301474-1|ABC01027.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301473-1|ABC01026.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301472-1|ABC01025.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301471-1|ABC01024.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301470-1|ABC01023.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301469-1|ABC01022.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301464-1|ABC01017.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301462-1|ABC01015.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301457-1|ABC01010.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301455-1|ABC01008.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301454-1|ABC01007.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301453-1|ABC01006.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301451-1|ABC01004.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301450-1|ABC01003.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301449-1|ABC01002.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301448-1|ABC01001.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301447-1|ABC01000.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301446-1|ABC00999.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301445-1|ABC00998.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ301444-1|ABC00997.1| 493|Homo sapiens TRIM5 protein. 38 0.087
DQ288685-1|ABB90543.1| 493|Homo sapiens TRIM5alpha protein. 38 0.087
BX255925-1|CAM24146.1| 261|Homo sapiens novel protein (DKFZp761... 38 0.087
BC090061-1|AAH90061.1| 180|Homo sapiens hypothetical protein LO... 38 0.087
BC021258-1|AAH21258.1| 347|Homo sapiens tripartite motif-contai... 38 0.087
BC020770-1|AAH20770.1| 219|Homo sapiens Unknown (protein for IM... 38 0.087
BC016958-1|AAH16958.1| 180|Homo sapiens RNF208 protein protein. 38 0.087
AY625000-1|AAT48101.1| 493|Homo sapiens TRIM5 alpha protein. 38 0.087
AK027593-1|BAB55218.1| 493|Homo sapiens protein ( Homo sapiens ... 38 0.087
AF498999-1|AAP30736.1| 250|Homo sapiens tripartite motif protei... 38 0.087
AF416715-1|AAL16809.1| 180|Homo sapiens unknown protein. 38 0.087
AF220029-1|AAG53483.1| 271|Homo sapiens tripartite motif protei... 38 0.087
AF220028-1|AAG53482.1| 326|Homo sapiens tripartite motif protei... 38 0.087
AF220027-1|AAG53481.1| 347|Homo sapiens tripartite motif protei... 38 0.087
AF220026-1|AAG53480.1| 400|Homo sapiens tripartite motif protei... 38 0.087
AF220025-1|AAG53479.1| 493|Homo sapiens tripartite motif protei... 38 0.087
BC103890-1|AAI03891.1| 395|Homo sapiens NHL repeat containing 1... 37 0.12
BC103889-1|AAI03890.1| 395|Homo sapiens NHL repeat containing 1... 37 0.12
BC103888-1|AAI03889.1| 395|Homo sapiens NHL repeat containing 1... 37 0.12
AY324850-1|AAQ19671.1| 395|Homo sapiens malin protein. 37 0.12
AL589723-1|CAH71232.1| 395|Homo sapiens protein ( Human DNA seq... 37 0.12
L04510-1|AAA35940.1| 574|Homo sapiens nucleotide binding protei... 37 0.15
BC022510-1|AAH22510.1| 574|Homo sapiens tripartite motif-contai... 37 0.15
BC001862-1|AAH01862.1| 208|Homo sapiens tripartite motif-contai... 37 0.15
AF521869-1|AAO14946.1| 375|Homo sapiens tripartite motif protei... 37 0.15
AF230399-1|AAG50178.1| 546|Homo sapiens tripartite motif protei... 37 0.15
AF230398-1|AAG50177.1| 569|Homo sapiens tripartite motif protei... 37 0.15
AF230397-1|AAG50176.1| 574|Homo sapiens tripartite motif protei... 37 0.15
AK027876-1|BAB55424.1| 488|Homo sapiens protein ( Homo sapiens ... 36 0.20
AF220143-1|AAG53516.1| 488|Homo sapiens tripartite motif protei... 36 0.20
AB039904-1|BAB17051.1| 270|Homo sapiens interferon-responsive f... 36 0.20
AB039903-1|BAB17050.1| 842|Homo sapiens interferon-responsive f... 36 0.20
AB039902-1|BAB17049.1| 488|Homo sapiens interferon-responsive f... 36 0.20
D21205-1|BAA04747.1| 630|Homo sapiens estrogen responsive finge... 36 0.27
DQ307286-1|ABC25188.1| 269|Homo sapiens plenty of SH3s-2 protein. 36 0.27
BC042541-1|AAH42541.1| 630|Homo sapiens tripartite motif-contai... 36 0.27
BC033871-1|AAH33871.1| 249|Homo sapiens TRIM74 protein protein. 36 0.27
BC033211-1|AAH33211.1| 269|Homo sapiens TRIM72 protein protein. 36 0.27
BC016924-1|AAH16924.1| 630|Homo sapiens tripartite motif-contai... 36 0.27
AK131485-1|BAD18630.1| 477|Homo sapiens protein ( Homo sapiens ... 36 0.27
AF498998-1|AAP30735.1| 250|Homo sapiens tripartite motif protei... 36 0.27
AB208994-1|BAD92231.1| 644|Homo sapiens tripartite motif-contai... 36 0.27
U13658-1|AAA79867.1| 475|Homo sapiens RO52 protein. 36 0.35
U01882-1|AAB87094.1| 475|Homo sapiens 52 kda component of SS-A/... 36 0.35
M62800-1|AAA36651.1| 475|Homo sapiens 52-kD SS-A/Ro autoantigen... 36 0.35
M34551-1|AAA36581.1| 475|Homo sapiens protein ( Human 52-kD rib... 36 0.35
BC013036-1|AAH13036.1| 192|Homo sapiens ring finger protein 183... 36 0.35
BC010861-1|AAH10861.1| 475|Homo sapiens tripartite motif-contai... 36 0.35
AY742713-1|AAU89982.1| 475|Homo sapiens Sjogren syndrome antige... 36 0.35
AF391283-1|AAK76432.1| 475|Homo sapiens SSA1 protein. 36 0.35
D87458-1|BAA13398.2| 711|Homo sapiens KIAA0282 protein. 35 0.46
DQ301458-1|ABC01011.1| 493|Homo sapiens TRIM5 protein. 35 0.46
DQ301456-1|ABC01009.1| 493|Homo sapiens TRIM5 protein. 35 0.46
BC132867-1|AAI32868.1| 511|Homo sapiens tripartite motif-contai... 35 0.46
BC132863-1|AAI32864.1| 511|Homo sapiens tripartite motif-contai... 35 0.46
BC080553-1|AAH80553.1| 221|Homo sapiens tripartite motif-contai... 35 0.46
BC011567-1|AAH11567.1| 221|Homo sapiens tripartite motif-contai... 35 0.46
AF396651-1|AAK85377.1| 511|Homo sapiens glycogenin-interacting ... 35 0.46
AF220032-1|AAG53486.1| 221|Homo sapiens tripartite motif protei... 35 0.46
Y07829-1|CAB52384.1| 481|Homo sapiens RING finger protein protein. 35 0.61
BX005441-5|CAM26238.1| 481|Homo sapiens tripartite motif-contai... 35 0.61
BX005441-4|CAM26237.1| 395|Homo sapiens tripartite motif-contai... 35 0.61
BC126472-1|AAI26473.1| 452|Homo sapiens tripartite motif-contai... 35 0.61
BC126470-1|AAI26471.1| 452|Homo sapiens tripartite motif-contai... 35 0.61
BC113419-1|AAI13420.1| 395|Homo sapiens tripartite motif-contai... 35 0.61
BC093926-1|AAH93926.1| 395|Homo sapiens tripartite motif-contai... 35 0.61
BC075020-1|AAH75020.1| 452|Homo sapiens ring finger protein 18 ... 35 0.61
BC075019-1|AAH75019.1| 452|Homo sapiens tripartite motif-contai... 35 0.61
BA000025-88|BAB63332.1| 481|Homo sapiens RNF9 protein. 35 0.61
AL844220-2|CAI18610.1| 481|Homo sapiens tripartite motif-contai... 35 0.61
AL844220-1|CAI18609.1| 395|Homo sapiens tripartite motif-contai... 35 0.61
AL671859-11|CAI17587.1| 481|Homo sapiens tripartite motif-conta... 35 0.61
AL671859-10|CAI17586.1| 395|Homo sapiens tripartite motif-conta... 35 0.61
AL669914-11|CAI18188.1| 481|Homo sapiens tripartite motif-conta... 35 0.61
AL669914-10|CAI18187.1| 395|Homo sapiens tripartite motif-conta... 35 0.61
AF220123-1|AAG53496.1| 396|Homo sapiens tripartite motif protei... 35 0.61
AF220122-1|AAG53495.1| 482|Homo sapiens tripartite motif protei... 35 0.61
AB202085-1|BAE78605.1| 481|Homo sapiens tripartite motif-contai... 35 0.61
AB103595-1|BAF31256.1| 481|Homo sapiens Zn-finger protein protein. 35 0.61
AB088089-1|BAC54921.1| 481|Homo sapiens tripartite motif-contai... 35 0.61
AB037682-1|BAB03503.1| 452|Homo sapiens testis-specific RING Fi... 35 0.61
Y13667-1|CAA74018.1| 667|Homo sapiens putative transcription fa... 34 0.81
X80200-1|CAA56491.1| 470|Homo sapiens cystein rich domain assoc... 34 0.81
DQ323999-1|ABC40750.1| 470|Homo sapiens TNF receptor-associated... 34 0.81
BX537987-1|CAD97947.1| 323|Homo sapiens hypothetical protein pr... 34 0.81
BC125107-1|AAI25108.1| 729|Homo sapiens SH3 domain containing r... 34 0.81
BC125106-1|AAI25107.1| 729|Homo sapiens SH3 domain containing r... 34 0.81
BC109260-1|AAI09261.1| 403|Homo sapiens tripartite motif-contai... 34 0.81
BC109259-1|AAI09260.1| 403|Homo sapiens tripartite motif-contai... 34 0.81
BC063407-1|AAH63407.1| 407|Homo sapiens tripartite motif-contai... 34 0.81
BC053626-1|AAH53626.1| 667|Homo sapiens midline 1 (Opitz/BBB sy... 34 0.81
BC003579-1|AAH03579.1| 407|Homo sapiens tripartite motif-contai... 34 0.81
BC001769-1|AAH01769.1| 470|Homo sapiens TNF receptor-associated... 34 0.81
AY937224-1|AAY16990.1| 195|Homo sapiens TRAF4 variant 5 protein. 34 0.81
AY937223-1|AAY16989.1| 128|Homo sapiens TRAF4 variant 4 protein. 34 0.81
AY764035-1|AAV51406.1| 410|Homo sapiens candidate tumor suppres... 34 0.81
AY455758-1|AAR31110.1| 407|Homo sapiens leu5 protein. 34 0.81
AY191002-1|AAO38979.1| 407|Homo sapiens ret finger protein 2 tr... 34 0.81
AY159379-1|AAN86853.1| 403|Homo sapiens tumor suppressor TSBF1 ... 34 0.81
AY026763-1|AAK07687.1| 638|Homo sapiens gene overexpressed in a... 34 0.81
AL137060-3|CAC43391.1| 407|Homo sapiens tripartite motif-contai... 34 0.81
AL137060-2|CAH72826.1| 266|Homo sapiens tripartite motif-contai... 34 0.81
AL137060-1|CAH72825.1| 129|Homo sapiens tripartite motif-contai... 34 0.81
AK074234-1|BAB85025.1| 457|Homo sapiens protein ( Homo sapiens ... 34 0.81
AJ224819-1|CAA12136.1| 407|Homo sapiens tumor suppressor protein. 34 0.81
AF279660-1|AAK13059.1| 407|Homo sapiens CAR protein. 34 0.81
AF269101-1|AAG33130.1| 667|Homo sapiens midline 1 protein. 34 0.81
AF241850-1|AAF91315.1| 407|Homo sapiens ret finger protein 2 pr... 34 0.81
AF241849-2|ABE41638.1| 407|Homo sapiens putative tumor suppress... 34 0.81
AF241849-1|AAK51624.1| 407|Homo sapiens putative tumor suppress... 34 0.81
AF230977-1|AAG50192.1| 552|Homo sapiens tripartite motif protei... 34 0.81
AF230976-1|AAG50191.1| 667|Homo sapiens tripartite motif protei... 34 0.81
AF220128-1|AAG53501.1| 175|Homo sapiens tripartite motif protei... 34 0.81
AF220127-1|AAG53500.1| 407|Homo sapiens tripartite motif protei... 34 0.81
AF082185-1|AAC32376.1| 198|Homo sapiens tumor necrosis factor r... 34 0.81
AF041209-1|AAC33001.1| 667|Homo sapiens midline 1 fetal kidney ... 34 0.81
AF041208-1|AAC33000.1| 667|Homo sapiens midline 1 fetal kidney ... 34 0.81
AF041207-1|AAC32999.1| 228|Homo sapiens midline 1 cerebellar is... 34 0.81
AF041206-1|AAC32998.1| 484|Homo sapiens midline 1 cerebellar is... 34 0.81
AF035360-1|AAB99951.1| 667|Homo sapiens ring finger protein pro... 34 0.81
Z84476-1|CAI19959.1| 513|Homo sapiens ret finger protein protein. 34 1.1
Z84474-1|CAB06480.2| 513|Homo sapiens ret finger protein protein. 34 1.1
M16029-1|AAA36786.1| 805|Homo sapiens protein ( Human ret mRNA ... 34 1.1
J03407-1|AAA36564.1| 513|Homo sapiens protein ( Human rfp trans... 34 1.1
DQ301476-1|ABC01029.1| 493|Homo sapiens TRIM5 protein. 34 1.1
DQ301468-1|ABC01021.1| 493|Homo sapiens TRIM5 protein. 34 1.1
DQ301467-1|ABC01020.1| 493|Homo sapiens TRIM5 protein. 34 1.1
DQ301466-1|ABC01019.1| 493|Homo sapiens TRIM5 protein. 34 1.1
DQ301465-1|ABC01018.1| 493|Homo sapiens TRIM5 protein. 34 1.1
DQ301463-1|ABC01016.1| 493|Homo sapiens TRIM5 protein. 34 1.1
DQ301461-1|ABC01014.1| 493|Homo sapiens TRIM5 protein. 34 1.1
DQ301460-1|ABC01013.1| 493|Homo sapiens TRIM5 protein. 34 1.1
DQ301459-1|ABC01012.1| 493|Homo sapiens TRIM5 protein. 34 1.1
DQ301452-1|ABC01005.1| 493|Homo sapiens TRIM5 protein. 34 1.1
BX537153-2|CAI18646.1| 513|Homo sapiens tripartite motif-contai... 34 1.1
BX537153-1|CAI18645.1| 358|Homo sapiens tripartite motif-contai... 34 1.1
BX119924-2|CAM26231.1| 513|Homo sapiens ret finger protein prot... 34 1.1
BX119924-1|CAM26230.1| 358|Homo sapiens ret finger protein prot... 34 1.1
BX005144-2|CAM25872.1| 513|Homo sapiens ret finger protein prot... 34 1.1
BX005144-1|CAM25871.1| 358|Homo sapiens ret finger protein prot... 34 1.1
BX000360-2|CAI18619.1| 513|Homo sapiens tripartite motif-contai... 34 1.1
BX000360-1|CAI18618.1| 358|Homo sapiens tripartite motif-contai... 34 1.1
BC127195-1|AAI27196.1| 110|Homo sapiens TRIM41 protein protein. 34 1.1
BC103491-1|AAI03492.1| 718|Homo sapiens LON peptidase N-termina... 34 1.1
BC100986-1|AAI00987.1| 471|Homo sapiens TRIM60 protein protein. 34 1.1
BC100985-1|AAI00986.1| 471|Homo sapiens tripartite motif-contai... 34 1.1
BC100984-1|AAI00985.1| 471|Homo sapiens tripartite motif-contai... 34 1.1
BC100983-1|AAI00984.1| 471|Homo sapiens tripartite motif-contai... 34 1.1
BC100671-1|AAI00672.1| 759|Homo sapiens LON peptidase N-termina... 34 1.1
BC099847-1|AAH99847.1| 759|Homo sapiens LON peptidase N-termina... 34 1.1
BC090953-1|AAH90953.1| 630|Homo sapiens tripartite motif-contai... 34 1.1
BC066924-1|AAH66924.1| 513|Homo sapiens tripartite motif-contai... 34 1.1
BC013580-1|AAH13580.1| 513|Homo sapiens tripartite motif-contai... 34 1.1
AL772284-2|CAI41519.1| 718|Homo sapiens LON peptidase N-termina... 34 1.1
AL662871-4|CAI18381.1| 513|Homo sapiens tripartite motif-contai... 34 1.1
AL662871-3|CAM25659.1| 358|Homo sapiens tripartite motif-contai... 34 1.1
AL662859-4|CAI17553.1| 513|Homo sapiens tripartite motif-contai... 34 1.1
AL662859-3|CAM24901.1| 358|Homo sapiens tripartite motif-contai... 34 1.1
AK093201-1|BAC04093.1| 471|Homo sapiens protein ( Homo sapiens ... 34 1.1
AK091777-1|BAC03744.1| 610|Homo sapiens protein ( Homo sapiens ... 34 1.1
AF230394-1|AAG50173.1| 358|Homo sapiens tripartite motif protei... 34 1.1
AF230393-1|AAG50172.1| 513|Homo sapiens tripartite motif protei... 34 1.1
AF171101-1|AAF32265.1| 47|Homo sapiens RFP transforming protei... 34 1.1
AB209885-1|BAD93122.1| 382|Homo sapiens ret finger protein isof... 34 1.1
AB100367-1|BAD07473.1| 518|Homo sapiens hypothetical protein pr... 34 1.1
AB100366-1|BAD07472.1| 630|Homo sapiens hypothetical protein pr... 34 1.1
DQ232883-1|ABB18376.1| 500|Homo sapiens tripartite motif protei... 33 1.4
BC111956-1|AAI11957.1| 203|Homo sapiens ring finger protein 152... 33 1.4
BC094004-1|AAH94004.1| 203|Homo sapiens ring finger protein 152... 33 1.4
BC050030-1|AAH50030.1| 247|Homo sapiens RNF182 protein protein. 33 1.4
BC047945-1|AAH47945.1| 500|Homo sapiens tripartite motif-contai... 33 1.4
BC036755-1|AAH36755.1| 690|Homo sapiens ligand of numb-protein ... 33 1.4
BC030666-1|AAH30666.1| 247|Homo sapiens ring finger protein 182... 33 1.4
BC024199-1|AAH24199.1| 503|Homo sapiens TRIM69 protein protein. 33 1.4
AL772284-3|CAI41520.1| 524|Homo sapiens LON peptidase N-termina... 33 1.4
AL138699-1|CAH73446.1| 690|Homo sapiens ligand of numb-protein ... 33 1.4
AK096495-1|BAC04805.1| 203|Homo sapiens protein ( Homo sapiens ... 33 1.4
AK090576-1|BAC03481.1| 247|Homo sapiens protein ( Homo sapiens ... 33 1.4
AK026265-1|BAB15419.1| 516|Homo sapiens protein ( Homo sapiens ... 33 1.4
Y18880-1|CAB56154.1| 715|Homo sapiens midline 2 protein protein. 33 1.9
X82200-1|CAA57684.1| 442|Homo sapiens gpStaf50 protein. 33 1.9
BT006663-1|AAP35309.1| 685|Homo sapiens midline 2 protein. 33 1.9
BC089393-1|AAH89393.1| 209|Homo sapiens tripartite motif-contai... 33 1.9
BC064636-1|AAH64636.1| 664|Homo sapiens ring finger protein 139... 33 1.9
BC035582-1|AAH35582.1| 498|Homo sapiens tripartite motif-contai... 33 1.9
BC022281-1|AAH22281.1| 498|Homo sapiens tripartite motif-contai... 33 1.9
BC021571-1|AAH21571.1| 664|Homo sapiens ring finger protein 139... 33 1.9
BC017707-1|AAH17707.1| 685|Homo sapiens midline 2 protein. 33 1.9
BC003054-1|AAH03054.1| 450|Homo sapiens bifunctional apoptosis ... 33 1.9
AY625004-1|AAT48105.1| 685|Homo sapiens TRIM1 beta protein. 33 1.9
AL109946-2|CAD19102.1| 252|Homo sapiens dJ820B18.2 (midline 1 (... 33 1.9
AL034399-3|CAI42074.1| 685|Homo sapiens midline 2 protein. 33 1.9
AL034399-2|CAI42073.1| 715|Homo sapiens midline 2 protein. 33 1.9
AF196481-1|AAF07341.1| 685|Homo sapiens RING finger protein pro... 33 1.9
AF173003-1|AAF59975.1| 450|Homo sapiens apoptosis regulator pro... 33 1.9
AF064801-1|AAC39930.1| 664|Homo sapiens multiple membrane spann... 33 1.9
Y07828-1|CAA69165.1| 236|Homo sapiens put. ring protein protein. 33 2.5
X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein. 33 2.5
BC109063-1|AAI09064.1| 485|Homo sapiens tripartite motif-contai... 33 2.5
BC075058-1|AAH75058.1| 485|Homo sapiens tripartite motif-contai... 33 2.5
AY937225-1|AAY16991.1| 167|Homo sapiens TRAF4 variant 6 protein. 33 2.5
AY937222-1|AAY16988.1| 144|Homo sapiens TRAF4 variant 3 protein. 33 2.5
AF439153-1|AAL31641.1| 485|Homo sapiens Ro/SSA1 related protein... 33 2.5
AF360739-1|AAL11501.1| 485|Homo sapiens SSA protein SS-56 protein. 33 2.5
AF230387-1|AAG50166.1| 267|Homo sapiens tripartite motif protei... 33 2.5
AF230386-1|AAG50165.1| 425|Homo sapiens tripartite motif protei... 33 2.5
U69108-1|AAC51329.1| 538|Homo sapiens TNF receptor associated f... 32 3.3
CR536557-1|CAG38794.1| 557|Homo sapiens TRAF5 protein. 32 3.3
BX897730-1|CAM26290.1| 425|Homo sapiens tripartite motif-contai... 32 3.3
BX322644-1|CAI18447.1| 425|Homo sapiens tripartite motif-contai... 32 3.3
BX088647-1|CAM26282.1| 425|Homo sapiens tripartite motif-contai... 32 3.3
BX005441-1|CAM26234.1| 425|Homo sapiens tripartite motif-contai... 32 3.3
BT007212-1|AAP35876.1| 436|Homo sapiens ring finger protein 29 ... 32 3.3
BT006675-1|AAP35321.1| 425|Homo sapiens tripartite motif-contai... 32 3.3
BC132798-1|AAI32799.1| 263|Homo sapiens ret finger protein-like... 32 3.3
BC132796-1|AAI32797.1| 263|Homo sapiens ret finger protein-like... 32 3.3
BC088365-1|AAH88365.2| 435|Homo sapiens PTD016 protein protein. 32 3.3
BC063872-1|AAH63872.1| 710|Homo sapiens tripartite motif-contai... 32 3.3
BC047564-1|AAH47564.1| 516|Homo sapiens tripartite motif-contai... 32 3.3
BC032830-1|AAH32830.1| 149|Homo sapiens TRAF5 protein protein. 32 3.3
BC029600-1|AAH29600.1| 557|Homo sapiens TNF receptor-associated... 32 3.3
BC022983-1|AAH22983.1| 728|Homo sapiens LNX1 protein protein. 32 3.3
BC017226-1|AAH17226.1| 237|Homo sapiens ring finger protein 166... 32 3.3
BC017017-1|AAH17017.1| 425|Homo sapiens tripartite motif-contai... 32 3.3
BC013948-1|AAH13948.1| 237|Homo sapiens ring finger protein 166... 32 3.3
BC013414-1|AAH13414.1| 550|Homo sapiens tripartite motif-contai... 32 3.3
BC007750-1|AAH07750.2| 452|Homo sapiens tripartite motif-contai... 32 3.3
AL671859-7|CAI17583.1| 425|Homo sapiens tripartite motif-contai... 32 3.3
AL669914-7|CAI18183.1| 425|Homo sapiens tripartite motif-contai... 32 3.3
AL590101-3|CAH72434.1| 557|Homo sapiens TNF receptor-associated... 32 3.3
AK222729-1|BAD96449.1| 425|Homo sapiens tripartite motif protei... 32 3.3
AK122906-1|BAC85513.1| 263|Homo sapiens 22D). protein. 32 3.3
AK098649-1|BAC05364.1| 252|Homo sapiens protein ( Homo sapiens ... 32 3.3
AK056823-1|BAB71291.1| 728|Homo sapiens protein ( Homo sapiens ... 32 3.3
AK055388-1|BAB70913.1| 802|Homo sapiens protein ( Homo sapiens ... 32 3.3
AK027664-1|BAB55276.1| 488|Homo sapiens protein ( Homo sapiens ... 32 3.3
AJ431704-1|CAD24432.1| 540|Homo sapiens RING finger protein 29 ... 32 3.3
AJ291712-2|CAC32840.1| 532|Homo sapiens ring finger protein 29 ... 32 3.3
AJ291712-1|CAC32839.1| 436|Homo sapiens ring finger protein 29 ... 32 3.3
AJ277493-1|CAC81835.1| 241|Homo sapiens RING finger protein 29 ... 32 3.3
AJ243489-1|CAC43020.1| 548|Homo sapiens RING finger protein 29 ... 32 3.3
AJ243488-1|CAC43019.1| 452|Homo sapiens RING finger protein 29 ... 32 3.3
AF220038-1|AAG53492.1| 664|Homo sapiens tripartite motif protei... 32 3.3
AF220037-1|AAG53491.1| 710|Homo sapiens tripartite motif protei... 32 3.3
AF220036-1|AAG53490.1| 664|Homo sapiens tripartite motif protei... 32 3.3
AF220030-1|AAG53484.1| 488|Homo sapiens tripartite motif protei... 32 3.3
AC095040-1|AAY41000.1| 126|Homo sapiens unknown protein. 32 3.3
AB202083-1|BAE78603.1| 425|Homo sapiens tripartite motif-contai... 32 3.3
AB000509-1|BAA25262.1| 557|Homo sapiens TRAF5 protein. 32 3.3
U78798-1|AAB38751.1| 522|Homo sapiens putative interleukin 1 si... 32 4.3
BX088647-7|CAM26287.1| 420|Homo sapiens ring finger protein 39 ... 32 4.3
BX088647-6|CAM26286.1| 354|Homo sapiens ring finger protein 39 ... 32 4.3
BT006795-1|AAP35441.1| 228|Homo sapiens zinc finger protein 313... 32 4.3
BC141807-1|AAI41808.1| 358|Homo sapiens tripartite motif-contai... 32 4.3
BC126422-1|AAI26423.1| 432|Homo sapiens ring finger protein 135... 32 4.3
BC126420-1|AAI26421.1| 432|Homo sapiens ring finger protein 135... 32 4.3
BC117385-1|AAI17386.1| 416|Homo sapiens LONRF1 protein protein. 32 4.3
BC117381-1|AAI17382.1| 416|Homo sapiens LONRF1 protein protein. 32 4.3
BC066919-1|AAH66919.1| 228|Homo sapiens zinc finger protein 313... 32 4.3
BC031052-1|AAH31052.1| 522|Homo sapiens TNF receptor-associated... 32 4.3
BC013695-1|AAH13695.1| 228|Homo sapiens zinc finger protein 313... 32 4.3
BC012758-1|AAH12758.1| 267|Homo sapiens RNF187 protein protein. 32 4.3
BC005084-1|AAH05084.1| 210|Homo sapiens ring finger protein 135... 32 4.3
BA000025-89|BAB63333.1| 420|Homo sapiens HCGV protein. 32 4.3
AY598332-1|AAT06743.1| 432|Homo sapiens L13 protein. 32 4.3
AY228337-1|AAO38054.1| 522|Homo sapiens TNF receptor-associated... 32 4.3
AL845439-6|CAI18544.1| 420|Homo sapiens ring finger protein 39 ... 32 4.3
AL845439-5|CAI18543.1| 354|Homo sapiens ring finger protein 39 ... 32 4.3
AL671859-6|CAI17581.1| 420|Homo sapiens ring finger protein 39 ... 32 4.3
AL671859-5|CAI17580.1| 354|Homo sapiens ring finger protein 39 ... 32 4.3
AL669914-6|CAI18180.1| 420|Homo sapiens ring finger protein 39 ... 32 4.3
AL669914-5|CAI18179.1| 354|Homo sapiens ring finger protein 39 ... 32 4.3
AL031685-2|CAB46028.1| 228|Homo sapiens zinc finger protein 313... 32 4.3
AJ496729-1|CAD43140.1| 432|Homo sapiens hypothetical protein pr... 32 4.3
AJ291714-2|CAC32842.1| 384|Homo sapiens ring finger protein 30 ... 32 4.3
AJ291714-1|CAC32841.1| 342|Homo sapiens ring finger protein 30 ... 32 4.3
AF265215-1|AAF75763.1| 228|Homo sapiens zinc finger protein 313... 32 4.3
AF238317-1|AAG40630.1| 256|Homo sapiens HZFw3 protein protein. 32 4.3
AF238316-1|AAG40629.1| 354|Homo sapiens HZFw2 protein protein. 32 4.3
AF238315-1|AAG40628.1| 420|Homo sapiens HZFw1 protein protein. 32 4.3
AC013413-4|AAY24296.1| 384|Homo sapiens unknown protein. 32 4.3
AB202082-3|BAE78602.1| 420|Homo sapiens ring finger protein 39 ... 32 4.3
AB088087-2|BAC54920.1| 420|Homo sapiens HZFW1 protein. 32 4.3
U43895-1|AAC51929.1| 777|Homo sapiens hepatocyte growth factor-... 31 5.7
D84064-1|BAA23366.1| 777|Homo sapiens Hrs protein. 31 5.7
BT009754-1|AAP88756.1| 777|Homo sapiens hepatocyte growth facto... 31 5.7
BT007373-1|AAP36037.1| 346|Homo sapiens ring finger protein 28 ... 31 5.7
BC117686-1|AAI17687.1| 1683|Homo sapiens SHPRH protein protein. 31 5.7
BC080529-1|AAH80529.1| 353|Homo sapiens tripartite motif-contai... 31 5.7
BC071887-1|AAH71887.1| 361|Homo sapiens TRIM41 protein protein. 31 5.7
BC053989-1|AAH53989.1| 631|Homo sapiens zinc finger protein 179... 31 5.7
BC004956-1|AAH04956.1| 361|Homo sapiens Unknown (protein for IM... 31 5.7
BC003565-1|AAH03565.1| 777|Homo sapiens hepatocyte growth facto... 31 5.7
AY163808-1|AAO06907.1| 1659|Homo sapiens helicase-like protein p... 31 5.7
AY161136-1|AAO26201.1| 1683|Homo sapiens SNF2 histone linker PHD... 31 5.7
AL451145-1|CAH70765.1| 1683|Homo sapiens SNF2 histone linker PHD... 31 5.7
AL391650-4|CAI17133.1| 353|Homo sapiens tripartite motif-contai... 31 5.7
AL356599-2|CAI41120.1| 1683|Homo sapiens SNF2 histone linker PHD... 31 5.7
AK056942-1|BAB71318.1| 353|Homo sapiens protein ( Homo sapiens ... 31 5.7
AJ291713-1|CAC33173.1| 340|Homo sapiens ring finger protein 28 ... 31 5.7
AJ276484-1|CAC81706.1| 353|Homo sapiens muscle specific RING fi... 31 5.7
AF361946-1|AAK52497.1| 288|Homo sapiens RING zinc finger protei... 31 5.7
AF353673-1|AAK39519.1| 353|Homo sapiens iris ring finger protei... 31 5.7
AF260566-1|AAF82361.1| 690|Homo sapiens hepatocyte growth facto... 31 5.7
AF054587-1|AAC08584.1| 95|Homo sapiens brain finger protein pr... 31 5.7
AB095943-1|BAC23119.1| 1092|Homo sapiens KIAA2023 protein protein. 31 5.7
AB026054-1|BAA84698.1| 632|Homo sapiens brain finger protein pr... 31 5.7
U67322-1|AAD00162.1| 468|Homo sapiens HBV associated factor pro... 31 7.6
U64805-1|AAC00049.1| 759|Homo sapiens Brca1-delta11b protein. 31 7.6
U14680-1|AAA73985.1| 1863|Homo sapiens breast and ovarian cancer... 31 7.6
U09825-1|AAA93131.1| 539|Homo sapiens acid finger protein protein. 31 7.6
L78833-1|AAC37594.1| 1863|Homo sapiens BRCA1 protein. 31 7.6
DQ478408-3|ABF14462.1| 1822|Homo sapiens early onset breast canc... 31 7.6
DQ190457-3|ABA29229.1| 1822|Homo sapiens breast cancer 1 early o... 31 7.6
DQ190456-3|ABA29226.1| 1863|Homo sapiens breast cancer 1 early o... 31 7.6
DQ190455-3|ABA29223.1| 1863|Homo sapiens breast cancer 1 early o... 31 7.6
DQ190454-3|ABA29220.1| 1863|Homo sapiens breast cancer 1 early o... 31 7.6
DQ190453-3|ABA29217.1| 1863|Homo sapiens breast cancer 1 early o... 31 7.6
DQ190452-3|ABA29214.1| 1863|Homo sapiens breast cancer 1 early o... 31 7.6
DQ190451-3|ABA29211.1| 1863|Homo sapiens breast cancer 1 early o... 31 7.6
DQ190450-3|ABA29208.1| 1863|Homo sapiens breast cancer 1 early o... 31 7.6
BX248419-7|CAM26027.1| 159|Homo sapiens tripartite motif-contai... 31 7.6
BX248419-6|CAM26026.1| 122|Homo sapiens tripartite motif-contai... 31 7.6
BX248419-5|CAM26025.1| 157|Homo sapiens tripartite motif-contai... 31 7.6
BX248419-4|CAM26024.1| 248|Homo sapiens tripartite motif-contai... 31 7.6
BX248419-3|CAM26023.1| 539|Homo sapiens tripartite motif-contai... 31 7.6
BC114469-1|AAI14470.1| 468|Homo sapiens tripartite motif family... 31 7.6
BC113860-1|AAI13861.1| 468|Homo sapiens tripartite motif family... 31 7.6
BC106745-1|AAI06746.1| 473|Homo sapiens BRCA1 protein protein. 31 7.6
BC096201-1|AAH96201.1| 330|Homo sapiens free fatty acid recepto... 31 7.6
BC096200-1|AAH96200.1| 330|Homo sapiens FFAR2 protein protein. 31 7.6
BC096199-1|AAH96199.1| 330|Homo sapiens free fatty acid recepto... 31 7.6
BC096198-1|AAH96198.1| 330|Homo sapiens free fatty acid recepto... 31 7.6
BC095535-1|AAH95535.1| 329|Homo sapiens FFAR2 protein protein. 31 7.6
BC085615-1|AAH85615.1| 624|Homo sapiens BRCA1 protein protein. 31 7.6
BC072418-1|AAH72418.1| 699|Homo sapiens BRCA1 protein protein. 31 7.6
BC032297-1|AAH32297.1| 539|Homo sapiens TRIM26 protein protein. 31 7.6
BC030969-1|AAH30969.1| 657|Homo sapiens Unknown (protein for IM... 31 7.6
BC024039-1|AAH24039.1| 539|Homo sapiens tripartite motif-contai... 31 7.6
BC015219-1|AAH15219.2| 500|Homo sapiens RanBP-type and C3HC4-ty... 31 7.6
BA000025-86|BAB63330.1| 539|Homo sapiens ZNF173 protein. 31 7.6
AY751490-1|AAU93634.1| 1841|Homo sapiens breast and ovarian canc... 31 7.6
AY354539-1|AAQ92977.1| 1399|Homo sapiens IRIS protein. 31 7.6
AY273801-1|AAP12647.1| 1863|Homo sapiens breast cancer 1, early ... 31 7.6
AL845450-2|CAI17701.1| 539|Homo sapiens tripartite motif-contai... 31 7.6
AL844220-9|CAM25796.1| 122|Homo sapiens tripartite motif-contai... 31 7.6
AL844220-8|CAI18615.2| 157|Homo sapiens tripartite motif-contai... 31 7.6
AL844220-7|CAM25795.1| 248|Homo sapiens tripartite motif-contai... 31 7.6
AL844220-6|CAI18614.1| 539|Homo sapiens tripartite motif-contai... 31 7.6
AL671855-7|CAM25550.1| 159|Homo sapiens tripartite motif-contai... 31 7.6
AL671855-6|CAM25549.1| 122|Homo sapiens tripartite motif-contai... 31 7.6
AL671855-5|CAM25548.1| 157|Homo sapiens tripartite motif-contai... 31 7.6
AL671855-4|CAM25547.1| 248|Homo sapiens tripartite motif-contai... 31 7.6
AL671855-3|CAI18235.1| 539|Homo sapiens tripartite motif-contai... 31 7.6
AL662832-2|CAI17498.1| 68|Homo sapiens tripartite motif-contai... 31 7.6
AL662832-1|CAI17497.1| 539|Homo sapiens tripartite motif-contai... 31 7.6
AL121747-5|CAC28312.1| 500|Homo sapiens RanBP-type and C3HC4-ty... 31 7.6
AL121747-2|CAC17516.1| 468|Homo sapiens RanBP-type and C3HC4-ty... 31 7.6
AK093499-1|BAC04185.1| 468|Homo sapiens protein ( Homo sapiens ... 31 7.6
AF024690-1|AAB86713.1| 330|Homo sapiens putative G protein-coup... 31 7.6
AC002511-2|AAB67886.1| 330|Homo sapiens PC28130_2 protein. 31 7.6
AB202086-1|BAE78607.1| 539|Homo sapiens tripartite motif-contai... 31 7.6
AB107766-1|BAC75409.1| 468|Homo sapiens ubiquitin ligase protein. 31 7.6
AB103596-1|BAF31258.1| 539|Homo sapiens Zn-finger protein protein. 31 7.6
AB088090-1|BAC54923.1| 539|Homo sapiens tripartite motif-contai... 31 7.6
AB037360-1|BAA90300.1| 1166|Homo sapiens ANKHZN protein. 31 7.6
AB033081-1|BAA86569.2| 1232|Homo sapiens KIAA1255 protein protein. 31 7.6
>AL136170-2|CAI19418.1| 1133|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1133
Score = 518 bits (1279), Expect = e-146
Identities = 260/410 (63%), Positives = 306/410 (74%), Gaps = 8/410 (1%)
Query: 1 MPIQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTIIQVE 60
MP+QAPQWTD+L+CP+C + F R PISL CGHT+C+ CL LHRK CPFDQT I +
Sbjct: 1 MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD 60
Query: 61 PEELVVNTALLQLAGYAPPSQPYQPPCIKALPESDRQAYDTVIRTMEELAVFLKCSGNAN 120
E L VN+ALLQL G P Q QP + + E D + Y+ + +EELA++LK +A
Sbjct: 61 IELLPVNSALLQLVGAQVPEQ--QPITLCSGVE-DTKHYEEAKKCVEELALYLKPLSSAR 117
Query: 121 MSGNGNR----LSRPMQRKLVTLLQCSITDEEXXXXXXXXXXSLGERTVTELILQHQNPQ 176
G + LSRPMQRKLVTL+ C + +EE SLGERTVTELILQHQNPQ
Sbjct: 118 GVGLNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQ 177
Query: 177 QLSANLWAAVRARGCQFLGPAMQXXXXXXXXXXXXDGSALSRKVLVMFVVQRLEPHFPQA 236
QLS+NLWAAVRARGCQFLGPAMQ DGSALSRKVLV+FVVQRLEP FPQA
Sbjct: 178 QLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQA 237
Query: 237 SKTSIGHVVQLLYRASCFKVSKRESDSSLMQLKEEFRTYDSLRREHDAQIVQIATESGLR 296
SKTSIGHVVQLLYRASCFKV+KR+ DSSLMQLKEEFRTY++LRREHD+QIVQIA E+GLR
Sbjct: 238 SKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLR 297
Query: 297 IAPDQWSALLYGDTAHKSHMQSIIDKLQTPQSFAQSVQELFVALQRTGDPEQLVTMSMHL 356
IAPDQWS+LLYGD +HKSHMQSIIDKLQTP SFAQSVQEL +ALQRTGDP L + HL
Sbjct: 298 IAPDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHL 357
Query: 357 DKLANIDANADAKSPTWKQMADVMTSLKEVVIGLINYIQQQA-AGKDMNQ 405
+ LANID + DA PTW+Q+ + + +++ VV GL++YIQ + G D Q
Sbjct: 358 ELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQ 407
>AL121983-1|CAI12318.1| 1133|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1133
Score = 518 bits (1279), Expect = e-146
Identities = 260/410 (63%), Positives = 306/410 (74%), Gaps = 8/410 (1%)
Query: 1 MPIQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTIIQVE 60
MP+QAPQWTD+L+CP+C + F R PISL CGHT+C+ CL LHRK CPFDQT I +
Sbjct: 1 MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD 60
Query: 61 PEELVVNTALLQLAGYAPPSQPYQPPCIKALPESDRQAYDTVIRTMEELAVFLKCSGNAN 120
E L VN+ALLQL G P Q QP + + E D + Y+ + +EELA++LK +A
Sbjct: 61 IELLPVNSALLQLVGAQVPEQ--QPITLCSGVE-DTKHYEEAKKCVEELALYLKPLSSAR 117
Query: 121 MSGNGNR----LSRPMQRKLVTLLQCSITDEEXXXXXXXXXXSLGERTVTELILQHQNPQ 176
G + LSRPMQRKLVTL+ C + +EE SLGERTVTELILQHQNPQ
Sbjct: 118 GVGLNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQ 177
Query: 177 QLSANLWAAVRARGCQFLGPAMQXXXXXXXXXXXXDGSALSRKVLVMFVVQRLEPHFPQA 236
QLS+NLWAAVRARGCQFLGPAMQ DGSALSRKVLV+FVVQRLEP FPQA
Sbjct: 178 QLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQA 237
Query: 237 SKTSIGHVVQLLYRASCFKVSKRESDSSLMQLKEEFRTYDSLRREHDAQIVQIATESGLR 296
SKTSIGHVVQLLYRASCFKV+KR+ DSSLMQLKEEFRTY++LRREHD+QIVQIA E+GLR
Sbjct: 238 SKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLR 297
Query: 297 IAPDQWSALLYGDTAHKSHMQSIIDKLQTPQSFAQSVQELFVALQRTGDPEQLVTMSMHL 356
IAPDQWS+LLYGD +HKSHMQSIIDKLQTP SFAQSVQEL +ALQRTGDP L + HL
Sbjct: 298 IAPDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHL 357
Query: 357 DKLANIDANADAKSPTWKQMADVMTSLKEVVIGLINYIQQQA-AGKDMNQ 405
+ LANID + DA PTW+Q+ + + +++ VV GL++YIQ + G D Q
Sbjct: 358 ELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQ 407
>BC044642-1|AAH44642.1| 506|Homo sapiens RC3H2 protein protein.
Length = 506
Score = 507 bits (1250), Expect = e-143
Identities = 253/418 (60%), Positives = 303/418 (72%), Gaps = 7/418 (1%)
Query: 1 MPIQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTIIQVE 60
MP+QA QWT++L+CP+C EF PISL C HT+C+ CL LHRK CPFDQT I +
Sbjct: 1 MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD 60
Query: 61 PEELVVNTALLQLAGYAPPSQPYQPPCIKALPESDRQAYDTVIRTMEELAVFLK--CSGN 118
+ L VN ALLQL G P IK + + Y+ + +E+LA++LK G
Sbjct: 61 IDVLPVNFALLQLVGAQVPDHQ----SIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGK 116
Query: 119 ANMSGNGNRLSRPMQRKLVTLLQCSITDEEXXXXXXXXXXSLGERTVTELILQHQNPQQL 178
S N + LSRPMQRKLVTL+ C + +EE SLGERTVTELILQHQNPQQL
Sbjct: 117 GVASLNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQL 176
Query: 179 SANLWAAVRARGCQFLGPAMQXXXXXXXXXXXXDGSALSRKVLVMFVVQRLEPHFPQASK 238
SANLWAAVRARGCQFLGPAMQ DGSALSRKVLV+FVVQRLEP FPQASK
Sbjct: 177 SANLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASK 236
Query: 239 TSIGHVVQLLYRASCFKVSKRESDSSLMQLKEEFRTYDSLRREHDAQIVQIATESGLRIA 298
TSIGHVVQLLYRASCFKV+KR+ DSSLMQLKEEFR+Y++LRREHDAQIV IA E+GLRI+
Sbjct: 237 TSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRIS 296
Query: 299 PDQWSALLYGDTAHKSHMQSIIDKLQTPQSFAQSVQELFVALQRTGDPEQLVTMSMHLDK 358
P+QWS+LLYGD AHKSHMQSIIDKLQ+P+SFA+SVQEL + LQRTGDP L + HL+
Sbjct: 297 PEQWSSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLEL 356
Query: 359 LANIDANADAKSPTWKQMADVMTSLKEVVIGLINYIQQQA-AGKDMNQGQKDLRNEPS 415
LANID N DA SPTW+Q+ + M ++K VV GL+++IQ + G + Q Q + + + S
Sbjct: 357 LANIDPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTS 414
>AL359512-8|CAI94964.1| 1191|Homo sapiens membrane associated DNA
binding protein protein.
Length = 1191
Score = 507 bits (1250), Expect = e-143
Identities = 253/418 (60%), Positives = 303/418 (72%), Gaps = 7/418 (1%)
Query: 1 MPIQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTIIQVE 60
MP+QA QWT++L+CP+C EF PISL C HT+C+ CL LHRK CPFDQT I +
Sbjct: 1 MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD 60
Query: 61 PEELVVNTALLQLAGYAPPSQPYQPPCIKALPESDRQAYDTVIRTMEELAVFLK--CSGN 118
+ L VN ALLQL G P IK + + Y+ + +E+LA++LK G
Sbjct: 61 IDVLPVNFALLQLVGAQVPDHQ----SIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGK 116
Query: 119 ANMSGNGNRLSRPMQRKLVTLLQCSITDEEXXXXXXXXXXSLGERTVTELILQHQNPQQL 178
S N + LSRPMQRKLVTL+ C + +EE SLGERTVTELILQHQNPQQL
Sbjct: 117 GVASLNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQL 176
Query: 179 SANLWAAVRARGCQFLGPAMQXXXXXXXXXXXXDGSALSRKVLVMFVVQRLEPHFPQASK 238
SANLWAAVRARGCQFLGPAMQ DGSALSRKVLV+FVVQRLEP FPQASK
Sbjct: 177 SANLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASK 236
Query: 239 TSIGHVVQLLYRASCFKVSKRESDSSLMQLKEEFRTYDSLRREHDAQIVQIATESGLRIA 298
TSIGHVVQLLYRASCFKV+KR+ DSSLMQLKEEFR+Y++LRREHDAQIV IA E+GLRI+
Sbjct: 237 TSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRIS 296
Query: 299 PDQWSALLYGDTAHKSHMQSIIDKLQTPQSFAQSVQELFVALQRTGDPEQLVTMSMHLDK 358
P+QWS+LLYGD AHKSHMQSIIDKLQ+P+SFA+SVQEL + LQRTGDP L + HL+
Sbjct: 297 PEQWSSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLEL 356
Query: 359 LANIDANADAKSPTWKQMADVMTSLKEVVIGLINYIQQQA-AGKDMNQGQKDLRNEPS 415
LANID N DA SPTW+Q+ + M ++K VV GL+++IQ + G + Q Q + + + S
Sbjct: 357 LANIDPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTS 414
>AF255303-1|AAG00432.1| 1048|Homo sapiens membrane-associated
nucleic acid binding protein protein.
Length = 1048
Score = 507 bits (1250), Expect = e-143
Identities = 253/418 (60%), Positives = 303/418 (72%), Gaps = 7/418 (1%)
Query: 1 MPIQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTIIQVE 60
MP+QA QWT++L+CP+C EF PISL C HT+C+ CL LHRK CPFDQT I +
Sbjct: 1 MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD 60
Query: 61 PEELVVNTALLQLAGYAPPSQPYQPPCIKALPESDRQAYDTVIRTMEELAVFLK--CSGN 118
+ L VN ALLQL G P IK + + Y+ + +E+LA++LK G
Sbjct: 61 IDVLPVNFALLQLVGAQVPDHQ----SIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGK 116
Query: 119 ANMSGNGNRLSRPMQRKLVTLLQCSITDEEXXXXXXXXXXSLGERTVTELILQHQNPQQL 178
S N + LSRPMQRKLVTL+ C + +EE SLGERTVTELILQHQNPQQL
Sbjct: 117 GVASLNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQL 176
Query: 179 SANLWAAVRARGCQFLGPAMQXXXXXXXXXXXXDGSALSRKVLVMFVVQRLEPHFPQASK 238
SANLWAAVRARGCQFLGPAMQ DGSALSRKVLV+FVVQRLEP FPQASK
Sbjct: 177 SANLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASK 236
Query: 239 TSIGHVVQLLYRASCFKVSKRESDSSLMQLKEEFRTYDSLRREHDAQIVQIATESGLRIA 298
TSIGHVVQLLYRASCFKV+KR+ DSSLMQLKEEFR+Y++LRREHDAQIV IA E+GLRI+
Sbjct: 237 TSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRIS 296
Query: 299 PDQWSALLYGDTAHKSHMQSIIDKLQTPQSFAQSVQELFVALQRTGDPEQLVTMSMHLDK 358
P+QWS+LLYGD AHKSHMQSIIDKLQ+P+SFA+SVQEL + LQRTGDP L + HL+
Sbjct: 297 PEQWSSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLEL 356
Query: 359 LANIDANADAKSPTWKQMADVMTSLKEVVIGLINYIQQQA-AGKDMNQGQKDLRNEPS 415
LANID N DA SPTW+Q+ + M ++K VV GL+++IQ + G + Q Q + + + S
Sbjct: 357 LANIDPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTS 414
>AB095945-1|BAC23121.1| 1109|Homo sapiens KIAA2025 protein protein.
Length = 1109
Score = 481 bits (1186), Expect = e-135
Identities = 246/385 (63%), Positives = 287/385 (74%), Gaps = 8/385 (2%)
Query: 26 RSPISLSCGHTLCRHCLIHLHRKQCPFDQTIIQVEPEELVVNTALLQLAGYAPPSQPYQP 85
R PISL CGHT+C+ CL LHRK CPFDQT I + E L VN+ALLQL G P Q QP
Sbjct: 2 RKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTDIELLPVNSALLQLVGAQVPEQ--QP 59
Query: 86 PCIKALPESDRQAYDTVIRTMEELAVFLKCSGNANMSGNGNR----LSRPMQRKLVTLLQ 141
+ + E D + Y+ + +EELA++LK +A G + LSRPMQRKLVTL+
Sbjct: 60 ITLCSGVE-DTKHYEEAKKCVEELALYLKPLSSARGVGLNSTTQSVLSRPMQRKLVTLVH 118
Query: 142 CSITDEEXXXXXXXXXXSLGERTVTELILQHQNPQQLSANLWAAVRARGCQFLGPAMQXX 201
C + +EE SLGERTVTELILQHQNPQQLS+NLWAAVRARGCQFLGPAMQ
Sbjct: 119 CQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLSSNLWAAVRARGCQFLGPAMQEE 178
Query: 202 XXXXXXXXXXDGSALSRKVLVMFVVQRLEPHFPQASKTSIGHVVQLLYRASCFKVSKRES 261
DGSALSRKVLV+FVVQRLEP FPQASKTSIGHVVQLLYRASCFKV+KR+
Sbjct: 179 ALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDE 238
Query: 262 DSSLMQLKEEFRTYDSLRREHDAQIVQIATESGLRIAPDQWSALLYGDTAHKSHMQSIID 321
DSSLMQLKEEFRTY++LRREHD+QIVQIA E+GLRIAPDQWS+LLYGD +HKSHMQSIID
Sbjct: 239 DSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIID 298
Query: 322 KLQTPQSFAQSVQELFVALQRTGDPEQLVTMSMHLDKLANIDANADAKSPTWKQMADVMT 381
KLQTP SFAQSVQEL +ALQRTGDP L + HL+ LANID + DA PTW+Q+ + +
Sbjct: 299 KLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELLANIDPSPDAPPPTWEQLENGLV 358
Query: 382 SLKEVVIGLINYIQQQA-AGKDMNQ 405
+++ VV GL++YIQ + G D Q
Sbjct: 359 AVRTVVHGLVDYIQNHSKKGADQQQ 383
>AL136170-3|CAI19419.1| 1086|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1086
Score = 456 bits (1124), Expect = e-128
Identities = 236/370 (63%), Positives = 275/370 (74%), Gaps = 8/370 (2%)
Query: 41 CLIHLHRKQCPFDQTIIQVEPEELVVNTALLQLAGYAPPSQPYQPPCIKALPESDRQAYD 100
CL LHRK CPFDQT I + E L VN+ALLQL G P Q QP + + E D + Y+
Sbjct: 2 CLNKLHRKACPFDQTTINTDIELLPVNSALLQLVGAQVPEQ--QPITLCSGVE-DTKHYE 58
Query: 101 TVIRTMEELAVFLKCSGNANMSGNGNR----LSRPMQRKLVTLLQCSITDEEXXXXXXXX 156
+ +EELA++LK +A G + LSRPMQRKLVTL+ C + +EE
Sbjct: 59 EAKKCVEELALYLKPLSSARGVGLNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRA 118
Query: 157 XXSLGERTVTELILQHQNPQQLSANLWAAVRARGCQFLGPAMQXXXXXXXXXXXXDGSAL 216
SLGERTVTELILQHQNPQQLS+NLWAAVRARGCQFLGPAMQ DGSAL
Sbjct: 119 ARSLGERTVTELILQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSAL 178
Query: 217 SRKVLVMFVVQRLEPHFPQASKTSIGHVVQLLYRASCFKVSKRESDSSLMQLKEEFRTYD 276
SRKVLV+FVVQRLEP FPQASKTSIGHVVQLLYRASCFKV+KR+ DSSLMQLKEEFRTY+
Sbjct: 179 SRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYE 238
Query: 277 SLRREHDAQIVQIATESGLRIAPDQWSALLYGDTAHKSHMQSIIDKLQTPQSFAQSVQEL 336
+LRREHD+QIVQIA E+GLRIAPDQWS+LLYGD +HKSHMQSIIDKLQTP SFAQSVQEL
Sbjct: 239 ALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQEL 298
Query: 337 FVALQRTGDPEQLVTMSMHLDKLANIDANADAKSPTWKQMADVMTSLKEVVIGLINYIQQ 396
+ALQRTGDP L + HL+ LANID + DA PTW+Q+ + + +++ VV GL++YIQ
Sbjct: 299 TIALQRTGDPANLNRLRPHLELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQN 358
Query: 397 QA-AGKDMNQ 405
+ G D Q
Sbjct: 359 HSKKGADQQQ 368
>AL136170-1|CAI19417.1| 1094|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1094
Score = 456 bits (1124), Expect = e-128
Identities = 236/370 (63%), Positives = 275/370 (74%), Gaps = 8/370 (2%)
Query: 41 CLIHLHRKQCPFDQTIIQVEPEELVVNTALLQLAGYAPPSQPYQPPCIKALPESDRQAYD 100
CL LHRK CPFDQT I + E L VN+ALLQL G P Q QP + + E D + Y+
Sbjct: 2 CLNKLHRKACPFDQTTINTDIELLPVNSALLQLVGAQVPEQ--QPITLCSGVE-DTKHYE 58
Query: 101 TVIRTMEELAVFLKCSGNANMSGNGNR----LSRPMQRKLVTLLQCSITDEEXXXXXXXX 156
+ +EELA++LK +A G + LSRPMQRKLVTL+ C + +EE
Sbjct: 59 EAKKCVEELALYLKPLSSARGVGLNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRA 118
Query: 157 XXSLGERTVTELILQHQNPQQLSANLWAAVRARGCQFLGPAMQXXXXXXXXXXXXDGSAL 216
SLGERTVTELILQHQNPQQLS+NLWAAVRARGCQFLGPAMQ DGSAL
Sbjct: 119 ARSLGERTVTELILQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSAL 178
Query: 217 SRKVLVMFVVQRLEPHFPQASKTSIGHVVQLLYRASCFKVSKRESDSSLMQLKEEFRTYD 276
SRKVLV+FVVQRLEP FPQASKTSIGHVVQLLYRASCFKV+KR+ DSSLMQLKEEFRTY+
Sbjct: 179 SRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYE 238
Query: 277 SLRREHDAQIVQIATESGLRIAPDQWSALLYGDTAHKSHMQSIIDKLQTPQSFAQSVQEL 336
+LRREHD+QIVQIA E+GLRIAPDQWS+LLYGD +HKSHMQSIIDKLQTP SFAQSVQEL
Sbjct: 239 ALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQEL 298
Query: 337 FVALQRTGDPEQLVTMSMHLDKLANIDANADAKSPTWKQMADVMTSLKEVVIGLINYIQQ 396
+ALQRTGDP L + HL+ LANID + DA PTW+Q+ + + +++ VV GL++YIQ
Sbjct: 299 TIALQRTGDPANLNRLRPHLELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQN 358
Query: 397 QA-AGKDMNQ 405
+ G D Q
Sbjct: 359 HSKKGADQQQ 368
>AL121983-3|CAH70710.1| 1086|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1086
Score = 456 bits (1124), Expect = e-128
Identities = 236/370 (63%), Positives = 275/370 (74%), Gaps = 8/370 (2%)
Query: 41 CLIHLHRKQCPFDQTIIQVEPEELVVNTALLQLAGYAPPSQPYQPPCIKALPESDRQAYD 100
CL LHRK CPFDQT I + E L VN+ALLQL G P Q QP + + E D + Y+
Sbjct: 2 CLNKLHRKACPFDQTTINTDIELLPVNSALLQLVGAQVPEQ--QPITLCSGVE-DTKHYE 58
Query: 101 TVIRTMEELAVFLKCSGNANMSGNGNR----LSRPMQRKLVTLLQCSITDEEXXXXXXXX 156
+ +EELA++LK +A G + LSRPMQRKLVTL+ C + +EE
Sbjct: 59 EAKKCVEELALYLKPLSSARGVGLNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRA 118
Query: 157 XXSLGERTVTELILQHQNPQQLSANLWAAVRARGCQFLGPAMQXXXXXXXXXXXXDGSAL 216
SLGERTVTELILQHQNPQQLS+NLWAAVRARGCQFLGPAMQ DGSAL
Sbjct: 119 ARSLGERTVTELILQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSAL 178
Query: 217 SRKVLVMFVVQRLEPHFPQASKTSIGHVVQLLYRASCFKVSKRESDSSLMQLKEEFRTYD 276
SRKVLV+FVVQRLEP FPQASKTSIGHVVQLLYRASCFKV+KR+ DSSLMQLKEEFRTY+
Sbjct: 179 SRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYE 238
Query: 277 SLRREHDAQIVQIATESGLRIAPDQWSALLYGDTAHKSHMQSIIDKLQTPQSFAQSVQEL 336
+LRREHD+QIVQIA E+GLRIAPDQWS+LLYGD +HKSHMQSIIDKLQTP SFAQSVQEL
Sbjct: 239 ALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQEL 298
Query: 337 FVALQRTGDPEQLVTMSMHLDKLANIDANADAKSPTWKQMADVMTSLKEVVIGLINYIQQ 396
+ALQRTGDP L + HL+ LANID + DA PTW+Q+ + + +++ VV GL++YIQ
Sbjct: 299 TIALQRTGDPANLNRLRPHLELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQN 358
Query: 397 QA-AGKDMNQ 405
+ G D Q
Sbjct: 359 HSKKGADQQQ 368
>AL121983-2|CAH70709.1| 1094|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1094
Score = 456 bits (1124), Expect = e-128
Identities = 236/370 (63%), Positives = 275/370 (74%), Gaps = 8/370 (2%)
Query: 41 CLIHLHRKQCPFDQTIIQVEPEELVVNTALLQLAGYAPPSQPYQPPCIKALPESDRQAYD 100
CL LHRK CPFDQT I + E L VN+ALLQL G P Q QP + + E D + Y+
Sbjct: 2 CLNKLHRKACPFDQTTINTDIELLPVNSALLQLVGAQVPEQ--QPITLCSGVE-DTKHYE 58
Query: 101 TVIRTMEELAVFLKCSGNANMSGNGNR----LSRPMQRKLVTLLQCSITDEEXXXXXXXX 156
+ +EELA++LK +A G + LSRPMQRKLVTL+ C + +EE
Sbjct: 59 EAKKCVEELALYLKPLSSARGVGLNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRA 118
Query: 157 XXSLGERTVTELILQHQNPQQLSANLWAAVRARGCQFLGPAMQXXXXXXXXXXXXDGSAL 216
SLGERTVTELILQHQNPQQLS+NLWAAVRARGCQFLGPAMQ DGSAL
Sbjct: 119 ARSLGERTVTELILQHQNPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSAL 178
Query: 217 SRKVLVMFVVQRLEPHFPQASKTSIGHVVQLLYRASCFKVSKRESDSSLMQLKEEFRTYD 276
SRKVLV+FVVQRLEP FPQASKTSIGHVVQLLYRASCFKV+KR+ DSSLMQLKEEFRTY+
Sbjct: 179 SRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYE 238
Query: 277 SLRREHDAQIVQIATESGLRIAPDQWSALLYGDTAHKSHMQSIIDKLQTPQSFAQSVQEL 336
+LRREHD+QIVQIA E+GLRIAPDQWS+LLYGD +HKSHMQSIIDKLQTP SFAQSVQEL
Sbjct: 239 ALRREHDSQIVQIAMEAGLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQEL 298
Query: 337 FVALQRTGDPEQLVTMSMHLDKLANIDANADAKSPTWKQMADVMTSLKEVVIGLINYIQQ 396
+ALQRTGDP L + HL+ LANID + DA PTW+Q+ + + +++ VV GL++YIQ
Sbjct: 299 TIALQRTGDPANLNRLRPHLELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQN 358
Query: 397 QA-AGKDMNQ 405
+ G D Q
Sbjct: 359 HSKKGADQQQ 368
>AL359512-9|CAI94965.1| 935|Homo sapiens membrane associated DNA
binding protein protein.
Length = 935
Score = 396 bits (974), Expect = e-109
Identities = 194/285 (68%), Positives = 226/285 (79%), Gaps = 1/285 (0%)
Query: 132 MQRKLVTLLQCSITDEEXXXXXXXXXXSLGERTVTELILQHQNPQQLSANLWAAVRARGC 191
MQRKLVTL+ C + +EE SLGERTVTELILQHQNPQQLSANLWAAVRARGC
Sbjct: 1 MQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANLWAAVRARGC 60
Query: 192 QFLGPAMQXXXXXXXXXXXXDGSALSRKVLVMFVVQRLEPHFPQASKTSIGHVVQLLYRA 251
QFLGPAMQ DGSALSRKVLV+FVVQRLEP FPQASKTSIGHVVQLLYRA
Sbjct: 61 QFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRA 120
Query: 252 SCFKVSKRESDSSLMQLKEEFRTYDSLRREHDAQIVQIATESGLRIAPDQWSALLYGDTA 311
SCFKV+KR+ DSSLMQLKEEFR+Y++LRREHDAQIV IA E+GLRI+P+QWS+LLYGD A
Sbjct: 121 SCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQWSSLLYGDLA 180
Query: 312 HKSHMQSIIDKLQTPQSFAQSVQELFVALQRTGDPEQLVTMSMHLDKLANIDANADAKSP 371
HKSHMQSIIDKLQ+P+SFA+SVQEL + LQRTGDP L + HL+ LANID N DA SP
Sbjct: 181 HKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANIDPNPDAVSP 240
Query: 372 TWKQMADVMTSLKEVVIGLINYIQQQA-AGKDMNQGQKDLRNEPS 415
TW+Q+ + M ++K VV GL+++IQ + G + Q Q + + + S
Sbjct: 241 TWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTS 285
>AK000308-1|BAA91073.1| 869|Homo sapiens protein ( Homo sapiens
cDNA FLJ20301 fis, clone HEP06569. ).
Length = 869
Score = 293 bits (718), Expect = 1e-78
Identities = 142/205 (69%), Positives = 171/205 (83%), Gaps = 1/205 (0%)
Query: 212 DGSALSRKVLVMFVVQRLEPHFPQASKTSIGHVVQLLYRASCFKVSKRESDSSLMQLKEE 271
DGSALSRKVLV+FVVQRLEP FPQASKTSIGHVVQLLYRASCFKV+KR+ DSSLMQLKEE
Sbjct: 15 DGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEE 74
Query: 272 FRTYDSLRREHDAQIVQIATESGLRIAPDQWSALLYGDTAHKSHMQSIIDKLQTPQSFAQ 331
FR+Y++LRREHDAQIV IA E+GLRI+P+QWS+LLYGD AHKSHMQSIIDKLQ+P+SFA+
Sbjct: 75 FRSYEALRREHDAQIVHIAMEAGLRISPEQWSSLLYGDLAHKSHMQSIIDKLQSPESFAK 134
Query: 332 SVQELFVALQRTGDPEQLVTMSMHLDKLANIDANADAKSPTWKQMADVMTSLKEVVIGLI 391
SVQEL + LQRTGDP L + HL+ LANID N DA SPTW+Q+ + M ++K VV GL+
Sbjct: 135 SVQELTIVLQRTGDPANLNRLRPHLELLANIDPNPDAVSPTWEQLENAMVAVKTVVHGLV 194
Query: 392 NYIQQQA-AGKDMNQGQKDLRNEPS 415
++IQ + G + Q Q + + + S
Sbjct: 195 DFIQNYSRKGHETPQPQPNSKYKTS 219
>BC011688-1|AAH11688.2| 177|Homo sapiens Unknown (protein for
IMAGE:4329353) protein.
Length = 177
Score = 158 bits (383), Expect = 4e-38
Identities = 85/154 (55%), Positives = 99/154 (64%), Gaps = 6/154 (3%)
Query: 45 LHRKQCPFDQTIIQVEPEELVVNTALLQLAGYAPPSQPYQPPCIKALPESDRQAYDTVIR 104
LHRK CPFDQT I + + L VN ALLQL G P IK + + Y+ +
Sbjct: 4 LHRKACPFDQTAINTDIDVLPVNFALLQLVGAQVPDHQ----SIKLSNLGENKHYEVAKK 59
Query: 105 TMEELAVFLK--CSGNANMSGNGNRLSRPMQRKLVTLLQCSITDEEXXXXXXXXXXSLGE 162
+E+LA++LK G S N + LSRPMQRKLVTL+ C + +EE SLGE
Sbjct: 60 CVEDLALYLKPLSGGKGVASLNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGE 119
Query: 163 RTVTELILQHQNPQQLSANLWAAVRARGCQFLGP 196
RTVTELILQHQNPQQLSANLWAAVRARGCQFLGP
Sbjct: 120 RTVTELILQHQNPQQLSANLWAAVRARGCQFLGP 153
>BC003154-1|AAH03154.1| 653|Homo sapiens tripartite
motif-containing 32 protein.
Length = 653
Score = 43.6 bits (98), Expect = 0.001
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL-----HRKQCPFDQTIIQVEP-EE 63
+ L CP+C F P L CGHT+CR CL L + +CPF I ++ +
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITSLTQ 75
Query: 64 LVVNTALLQLAGYAPPSQ 81
L N +L++ A S+
Sbjct: 76 LTDNLTVLKIIDTAGLSE 93
>AL133284-7|CAB92723.1| 653|Homo sapiens tripartite
motif-containing 32 protein.
Length = 653
Score = 43.6 bits (98), Expect = 0.001
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL-----HRKQCPFDQTIIQVEP-EE 63
+ L CP+C F P L CGHT+CR CL L + +CPF I ++ +
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITSLTQ 75
Query: 64 LVVNTALLQLAGYAPPSQ 81
L N +L++ A S+
Sbjct: 76 LTDNLTVLKIIDTAGLSE 93
>AL133284-6|CAI16372.1| 173|Homo sapiens tripartite
motif-containing 32 protein.
Length = 173
Score = 43.6 bits (98), Expect = 0.001
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL-----HRKQCPFDQTIIQVEP-EE 63
+ L CP+C F P L CGHT+CR CL L + +CPF I ++ +
Sbjct: 16 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITSLTQ 75
Query: 64 LVVNTALLQLAGYAPPSQ 81
L N +L++ A S+
Sbjct: 76 LTDNLTVLKIIDTAGLSE 93
>BC112154-1|AAI12155.1| 487|Homo sapiens tripartite motif protein
50A protein.
Length = 487
Score = 41.9 bits (94), Expect = 0.004
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 3 IQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 45
+ P+ D L CP+C F + P+ L CGH+ C+ CL+ L
Sbjct: 5 VSLPELEDRLQCPICLEVF----KEPLMLQCGHSYCKGCLVSL 43
>BC112152-1|AAI12153.1| 487|Homo sapiens tripartite motif protein
50A protein.
Length = 487
Score = 41.9 bits (94), Expect = 0.004
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 3 IQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 45
+ P+ D L CP+C F + P+ L CGH+ C+ CL+ L
Sbjct: 5 VSLPELEDRLQCPICLEVF----KEPLMLQCGHSYCKGCLVSL 43
>U18543-1|AAA86474.1| 653|Homo sapiens zinc-finger protein
protein.
Length = 653
Score = 41.1 bits (92), Expect = 0.007
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL-----HRKQCPFDQTIIQVEP-EE 63
+ L CP+C P L CGHT+CR CL L + +CPF I ++ +
Sbjct: 16 EVLECPICMESITEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITSLTQ 75
Query: 64 LVVNTALLQLAGYAPPSQ 81
L N +L++ A S+
Sbjct: 76 LTDNLTVLKIIDTAGLSE 93
>BC053671-1|AAH53671.1| 1056|Homo sapiens SH3RF1 protein protein.
Length = 1056
Score = 41.1 bits (92), Expect = 0.007
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL----HRKQCPFDQTIIQVEPEELV 65
D L CPVC A + L C HT C+ CL+ + + +CP +T++ EEL
Sbjct: 8 DLLECPVCLERLDASAKV---LPCQHTFCKRCLLGIVGSRNELRCPECRTLVGSGVEELP 64
Query: 66 VNTALLQLAGYAPPSQPYQP 85
N L++L +P++P
Sbjct: 65 SNILLVRLLD-GIKQRPWKP 83
>BC024267-1|AAH24267.1| 594|Homo sapiens TRAF7 protein protein.
Length = 594
Score = 41.1 bits (92), Expect = 0.007
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTIIQVEPEELVV 66
L C +CC F + P+ +CGHT CR C L ++CP D + V + V
Sbjct: 53 LCCQLCCSVF----KDPVITTCGHTFCRRCA--LKSEKCPVDNVKLTVVVNNIAV 101
>AY569455-1|AAS68363.1| 670|Homo sapiens TRAF7 protein.
Length = 670
Score = 41.1 bits (92), Expect = 0.007
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTIIQVEPEELVV 66
L C +CC F + P+ +CGHT CR C L ++CP D + V + V
Sbjct: 129 LCCQLCCSVF----KDPVITTCGHTFCRRCA--LKSEKCPVDNVKLTVVVNNIAV 177
>AK021429-1|BAB13822.1| 712|Homo sapiens protein ( Homo sapiens
cDNA FLJ11367 fis, clone HEMBA1000303, highly similar
to Mus musculus Plenty of SH3s (POSH) mRNA. ).
Length = 712
Score = 41.1 bits (92), Expect = 0.007
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL----HRKQCPFDQTIIQVEPEELV 65
D L CPVC A + L C HT C+ CL+ + + +CP +T++ EEL
Sbjct: 8 DLLECPVCLERLDASAKV---LPCQHTFCKRCLLGIVGSRNELRCPECRTLVGSGVEELP 64
Query: 66 VNTALLQLAGYAPPSQPYQP 85
N L++L +P++P
Sbjct: 65 SNILLVRLLD-GIKQRPWKP 83
>BC025949-1|AAH25949.1| 294|Homo sapiens TRIM4 protein protein.
Length = 294
Score = 40.7 bits (91), Expect = 0.009
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
Query: 3 IQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCP 51
++A + LTCP+C F + P+S+ CGH CR C LHR P
Sbjct: 1 MEAEDIQEELTCPICLDYF----QDPVSIECGHNFCRGC---LHRNWAP 42
>BC011763-1|AAH11763.1| 294|Homo sapiens TRIM4 protein protein.
Length = 294
Score = 40.7 bits (91), Expect = 0.009
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
Query: 3 IQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCP 51
++A + LTCP+C F + P+S+ CGH CR C LHR P
Sbjct: 1 MEAEDIQEELTCPICLDYF----QDPVSIECGHNFCRGC---LHRNWAP 42
>AF220024-1|AAG53478.1| 474|Homo sapiens tripartite motif protein
TRIM4 isoform beta protein.
Length = 474
Score = 40.7 bits (91), Expect = 0.009
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
Query: 3 IQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCP 51
++A + LTCP+C F + P+S+ CGH CR C LHR P
Sbjct: 1 MEAEDIQEELTCPICLDYF----QDPVSIECGHNFCRGC---LHRNWAP 42
>AF220023-1|AAG53477.1| 500|Homo sapiens tripartite motif protein
TRIM4 isoform alpha protein.
Length = 500
Score = 40.7 bits (91), Expect = 0.009
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
Query: 3 IQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCP 51
++A + LTCP+C F + P+S+ CGH CR C LHR P
Sbjct: 1 MEAEDIQEELTCPICLDYF----QDPVSIECGHNFCRGC---LHRNWAP 42
>AC011904-3|AAS07396.1| 294|Homo sapiens unknown protein.
Length = 294
Score = 40.7 bits (91), Expect = 0.009
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
Query: 3 IQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCP 51
++A + LTCP+C F + P+S+ CGH CR C LHR P
Sbjct: 1 MEAEDIQEELTCPICLDYF----QDPVSIECGHNFCRGC---LHRNWAP 42
>AC011904-2|AAS07398.1| 474|Homo sapiens unknown protein.
Length = 474
Score = 40.7 bits (91), Expect = 0.009
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
Query: 3 IQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCP 51
++A + LTCP+C F + P+S+ CGH CR C LHR P
Sbjct: 1 MEAEDIQEELTCPICLDYF----QDPVSIECGHNFCRGC---LHRNWAP 42
>AC011904-1|AAS07397.1| 500|Homo sapiens unknown protein.
Length = 500
Score = 40.7 bits (91), Expect = 0.009
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
Query: 3 IQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCP 51
++A + LTCP+C F + P+S+ CGH CR C LHR P
Sbjct: 1 MEAEDIQEELTCPICLDYF----QDPVSIECGHNFCRGC---LHRNWAP 42
>AY081949-1|AAL91072.1| 486|Homo sapiens tripartite motif protein
50 isoform beta protein.
Length = 486
Score = 40.3 bits (90), Expect = 0.012
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 45
D+L CP+C F + P+ L CGH+ C+ CL+ L
Sbjct: 12 DWLQCPICLEVF----KEPLMLQCGHSYCKGCLVSL 43
>AY081948-1|AAL91071.1| 487|Homo sapiens tripartite motif protein
50 isoform alpha protein.
Length = 487
Score = 40.3 bits (90), Expect = 0.012
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 45
D+L CP+C F + P+ L CGH+ C+ CL+ L
Sbjct: 12 DWLQCPICLEVF----KEPLMLQCGHSYCKGCLVSL 43
>BC048194-1|AAH48194.1| 755|Homo sapiens tripartite
motif-containing 56 protein.
Length = 755
Score = 39.1 bits (87), Expect = 0.029
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Query: 9 TDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL---HRKQCPFDQTIIQVEPE 62
+D+L C +C + R+P +L C HT C+ CL L R +CP + + V PE
Sbjct: 16 SDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLADGGRVRCPECRETVPVPPE 68
>BC011882-1|AAH11882.1| 379|Homo sapiens TRIM56 protein protein.
Length = 379
Score = 39.1 bits (87), Expect = 0.029
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Query: 9 TDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL---HRKQCPFDQTIIQVEPE 62
+D+L C +C + R+P +L C HT C+ CL L R +CP + + V PE
Sbjct: 87 SDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLADGGRVRCPECRETVPVPPE 139
>BC007372-1|AAH07372.1| 297|Homo sapiens tripartite
motif-containing 52 protein.
Length = 297
Score = 39.1 bits (87), Expect = 0.029
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 2 PIQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTIIQVEP 61
P+Q Q + C +C F + P+S+SCGH CR C+ L K+ DQ + E
Sbjct: 10 PMQTLQ--EEAVCAICLDYF----KDPVSISCGHNFCRGCVTQLWSKEDEEDQNEEEDEW 63
Query: 62 EE 63
EE
Sbjct: 64 EE 65
>BC005847-1|AAH05847.3| 755|Homo sapiens tripartite
motif-containing 56 protein.
Length = 755
Score = 39.1 bits (87), Expect = 0.029
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Query: 9 TDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL---HRKQCPFDQTIIQVEPE 62
+D+L C +C + R+P +L C HT C+ CL L R +CP + + V PE
Sbjct: 16 SDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLADGGRVRCPECRETVPVPPE 68
>AK092927-1|BAC04004.1| 269|Homo sapiens protein ( Homo sapiens
cDNA FLJ35608 fis, clone SPLEN2009803. ).
Length = 269
Score = 39.1 bits (87), Expect = 0.029
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Query: 9 TDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL---HRKQCPFDQTIIQVEPE 62
+D+L C +C + R+P +L C HT C+ CL L R +CP + + V PE
Sbjct: 16 SDFLACKICLEQL----RAPKTLPCLHTYCQDCLAQLADGGRVRCPECRETVPVPPE 68
>AK054802-1|BAB70809.1| 297|Homo sapiens protein ( Homo sapiens
cDNA FLJ30240 fis, clone BRACE2002091, weakly similar
to ZINC-FINGER PROTEIN RFP. ).
Length = 297
Score = 39.1 bits (87), Expect = 0.029
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 2 PIQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTIIQVEP 61
P+Q Q + C +C F + P+S+SCGH CR C+ L K+ DQ + E
Sbjct: 10 PMQTLQ--EEAVCAICLDYF----KDPVSISCGHNFCRGCVTQLWSKEDEEDQNEEEDEW 63
Query: 62 EE 63
EE
Sbjct: 64 EE 65
>AB209243-1|BAD92480.1| 311|Homo sapiens tripartite
motif-containing 52 variant protein.
Length = 311
Score = 39.1 bits (87), Expect = 0.029
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 2 PIQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTIIQVEP 61
P+Q Q + C +C F + P+S+SCGH CR C+ L K+ DQ + E
Sbjct: 36 PMQTLQ--EEAVCAICLDYF----KDPVSISCGHNFCRGCVTQLWSKEDEEDQNEEEDEW 89
Query: 62 EE 63
EE
Sbjct: 90 EE 91
>DQ301480-1|ABC01033.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301479-1|ABC01032.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301478-1|ABC01031.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301477-1|ABC01030.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301475-1|ABC01028.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301474-1|ABC01027.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301473-1|ABC01026.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301472-1|ABC01025.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301471-1|ABC01024.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301470-1|ABC01023.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301469-1|ABC01022.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301464-1|ABC01017.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301462-1|ABC01015.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301457-1|ABC01010.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301455-1|ABC01008.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301454-1|ABC01007.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301453-1|ABC01006.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301451-1|ABC01004.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301450-1|ABC01003.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301449-1|ABC01002.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301448-1|ABC01001.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301447-1|ABC01000.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301446-1|ABC00999.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301445-1|ABC00998.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ301444-1|ABC00997.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>DQ288685-1|ABB90543.1| 493|Homo sapiens TRIM5alpha protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>BX255925-1|CAM24146.1| 261|Homo sapiens novel protein
(DKFZp761H1710) protein.
Length = 261
Score = 37.5 bits (83), Expect = 0.087
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCP 51
L CP C + R P LSC H++C CL L+ + CP
Sbjct: 141 LECPTCGHSYNVTQRRPRVLSCLHSVCEQCLQILY-ESCP 179
>BC090061-1|AAH90061.1| 180|Homo sapiens hypothetical protein
LOC727800 protein.
Length = 180
Score = 37.5 bits (83), Expect = 0.087
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCP 51
L CP C + R P LSC H++C CL L+ + CP
Sbjct: 60 LECPTCGHSYNVTQRRPRVLSCLHSVCEQCLQILY-ESCP 98
>BC021258-1|AAH21258.1| 347|Homo sapiens tripartite
motif-containing 5 protein.
Length = 347
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>BC020770-1|AAH20770.1| 219|Homo sapiens Unknown (protein for
IMAGE:4733445) protein.
Length = 219
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>BC016958-1|AAH16958.1| 180|Homo sapiens RNF208 protein protein.
Length = 180
Score = 37.5 bits (83), Expect = 0.087
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCP 51
L CP C + R P LSC H++C CL L+ + CP
Sbjct: 60 LECPTCGHSYNVTQRRPRVLSCLHSVCEQCLQILY-ESCP 98
>AY625000-1|AAT48101.1| 493|Homo sapiens TRIM5 alpha protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>AK027593-1|BAB55218.1| 493|Homo sapiens protein ( Homo sapiens
cDNA FLJ14687 fis, clone NT2RP2005003, weakly similar
to 52 KD RO PROTEIN. ).
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>AF498999-1|AAP30736.1| 250|Homo sapiens tripartite motif protein
TRIM50C protein.
Length = 250
Score = 37.5 bits (83), Expect = 0.087
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 9/47 (19%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLI----HLHRK-QCP 51
D+L CP+C F + + L CGH+ C+ CL+ HL K +CP
Sbjct: 12 DWLQCPICLEVF----KESLMLQCGHSYCKGCLVSLSYHLDTKVRCP 54
>AF416715-1|AAL16809.1| 180|Homo sapiens unknown protein.
Length = 180
Score = 37.5 bits (83), Expect = 0.087
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCP 51
L CP C + R P LSC H++C CL L+ + CP
Sbjct: 60 LECPTCGHSYNVTQRRPRVLSCLHSVCEQCLQILY-ESCP 98
>AF220029-1|AAG53483.1| 271|Homo sapiens tripartite motif protein
TRIM5 isoform epsilon protein.
Length = 271
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>AF220028-1|AAG53482.1| 326|Homo sapiens tripartite motif protein
TRIM5 isoform delta protein.
Length = 326
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>AF220027-1|AAG53481.1| 347|Homo sapiens tripartite motif protein
TRIM5 isoform gamma protein.
Length = 347
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>AF220026-1|AAG53480.1| 400|Homo sapiens tripartite motif protein
TRIM5 isoform beta protein.
Length = 400
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>AF220025-1|AAG53479.1| 493|Homo sapiens tripartite motif protein
TRIM5 isoform alpha protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.087
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL H+K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANHKK 45
>BC103890-1|AAI03891.1| 395|Homo sapiens NHL repeat containing 1
protein.
Length = 395
Score = 37.1 bits (82), Expect = 0.12
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 12 LTCPVCCREFG-APPRSPISLSCGHTLCRHCLIHL-HRK----QCPF 52
L C VC +FG R P +LSCGH +C C+ L H + +CPF
Sbjct: 24 LECKVCFEKFGHRQQRRPRNLSCGHVVCLACVAALAHPRTLALECPF 70
>BC103889-1|AAI03890.1| 395|Homo sapiens NHL repeat containing 1
protein.
Length = 395
Score = 37.1 bits (82), Expect = 0.12
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 12 LTCPVCCREFG-APPRSPISLSCGHTLCRHCLIHL-HRK----QCPF 52
L C VC +FG R P +LSCGH +C C+ L H + +CPF
Sbjct: 24 LECKVCFEKFGHRQQRRPRNLSCGHVVCLACVAALAHPRTLALECPF 70
>BC103888-1|AAI03889.1| 395|Homo sapiens NHL repeat containing 1
protein.
Length = 395
Score = 37.1 bits (82), Expect = 0.12
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 12 LTCPVCCREFG-APPRSPISLSCGHTLCRHCLIHL-HRK----QCPF 52
L C VC +FG R P +LSCGH +C C+ L H + +CPF
Sbjct: 24 LECKVCFEKFGHRQQRRPRNLSCGHVVCLACVAALAHPRTLALECPF 70
>AY324850-1|AAQ19671.1| 395|Homo sapiens malin protein.
Length = 395
Score = 37.1 bits (82), Expect = 0.12
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 12 LTCPVCCREFG-APPRSPISLSCGHTLCRHCLIHL-HRK----QCPF 52
L C VC +FG R P +LSCGH +C C+ L H + +CPF
Sbjct: 24 LECKVCFEKFGHRQQRRPRNLSCGHVVCLACVAALAHPRTLALECPF 70
>AL589723-1|CAH71232.1| 395|Homo sapiens protein ( Human DNA
sequence from clone RP11-204B7 on chromosome 6. ).
Length = 395
Score = 37.1 bits (82), Expect = 0.12
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Query: 12 LTCPVCCREFG-APPRSPISLSCGHTLCRHCLIHL-HRK----QCPF 52
L C VC +FG R P +LSCGH +C C+ L H + +CPF
Sbjct: 24 LECKVCFEKFGHRQQRRPRNLSCGHVVCLACVAALAHPRTLALECPF 70
>L04510-1|AAA35940.1| 574|Homo sapiens nucleotide binding protein
protein.
Length = 574
Score = 36.7 bits (81), Expect = 0.15
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 12 LTCPVCCREFGAP-PRSPISLSCGHTLCRHCL--IHLHRK--QCPFDQTIIQVEPE---E 63
L C VC F + P L CGHT+C CL + LH + +CPFD+ + +
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGRAIRCPFDRQVTDLGDSGVWG 88
Query: 64 LVVNTALLQL 73
L N ALL+L
Sbjct: 89 LKKNFALLEL 98
>BC022510-1|AAH22510.1| 574|Homo sapiens tripartite
motif-containing 23 protein.
Length = 574
Score = 36.7 bits (81), Expect = 0.15
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 12 LTCPVCCREFGAP-PRSPISLSCGHTLCRHCL--IHLHRK--QCPFDQTIIQVEPE---E 63
L C VC F + P L CGHT+C CL + LH + +CPFD+ + +
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGRAIRCPFDRQVTDLGDSGVWG 88
Query: 64 LVVNTALLQL 73
L N ALL+L
Sbjct: 89 LKKNFALLEL 98
>BC001862-1|AAH01862.1| 208|Homo sapiens tripartite
motif-containing 48 protein.
Length = 208
Score = 36.7 bits (81), Expect = 0.15
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPF----DQTIIQVEPEELVVN 67
LTCP+C F P+++ CGH+ CR C +L+ + P + I ++ L N
Sbjct: 13 LTCPICMNYF----IDPVTIDCGHSFCRPC-FYLNWQDIPILTQCFECIKTIQQRNLKTN 67
Query: 68 TALLQLAGYA 77
L ++A A
Sbjct: 68 IRLKKMASLA 77
>AF521869-1|AAO14946.1| 375|Homo sapiens tripartite motif protein
48 protein.
Length = 375
Score = 36.7 bits (81), Expect = 0.15
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPF----DQTIIQVEPEELVVN 67
LTCP+C F P+++ CGH+ CR C +L+ + P + I ++ L N
Sbjct: 13 LTCPICMNYF----IDPVTIDCGHSFCRPC-FYLNWQDIPILTQCFECIKTIQQRNLKTN 67
Query: 68 TALLQLAGYA 77
L ++A A
Sbjct: 68 IRLKKMASLA 77
>AF230399-1|AAG50178.1| 546|Homo sapiens tripartite motif protein
TRIM23 gamma protein.
Length = 546
Score = 36.7 bits (81), Expect = 0.15
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 12 LTCPVCCREFGAP-PRSPISLSCGHTLCRHCL--IHLHRK--QCPFDQTIIQVEPE---E 63
L C VC F + P L CGHT+C CL + LH + +CPFD+ + +
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGRAIRCPFDRQVTDLGDSGVWG 88
Query: 64 LVVNTALLQL 73
L N ALL+L
Sbjct: 89 LKKNFALLEL 98
>AF230398-1|AAG50177.1| 569|Homo sapiens tripartite motif protein
TRIM23 beta protein.
Length = 569
Score = 36.7 bits (81), Expect = 0.15
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 12 LTCPVCCREFGAP-PRSPISLSCGHTLCRHCL--IHLHRK--QCPFDQTIIQVEPE---E 63
L C VC F + P L CGHT+C CL + LH + +CPFD+ + +
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGRAIRCPFDRQVTDLGDSGVWG 88
Query: 64 LVVNTALLQL 73
L N ALL+L
Sbjct: 89 LKKNFALLEL 98
>AF230397-1|AAG50176.1| 574|Homo sapiens tripartite motif protein
TRIM23 alpha protein.
Length = 574
Score = 36.7 bits (81), Expect = 0.15
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 12 LTCPVCCREFGAP-PRSPISLSCGHTLCRHCL--IHLHRK--QCPFDQTIIQVEPE---E 63
L C VC F + P L CGHT+C CL + LH + +CPFD+ + +
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGRAIRCPFDRQVTDLGDSGVWG 88
Query: 64 LVVNTALLQL 73
L N ALL+L
Sbjct: 89 LKKNFALLEL 98
>AK027876-1|BAB55424.1| 488|Homo sapiens protein ( Homo sapiens
cDNA FLJ14970 fis, clone THYRO1000501, weakly similar
to 52 KD RO PROTEIN. ).
Length = 488
Score = 36.3 bits (80), Expect = 0.20
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+TCP+C P+SL CGH+LCR C+
Sbjct: 13 VTCPICLELL----TEPLSLDCGHSLCRACI 39
>AF220143-1|AAG53516.1| 488|Homo sapiens tripartite motif protein
TRIM34 alpha protein.
Length = 488
Score = 36.3 bits (80), Expect = 0.20
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+TCP+C P+SL CGH+LCR C+
Sbjct: 13 VTCPICLELL----TEPLSLDCGHSLCRACI 39
>AB039904-1|BAB17051.1| 270|Homo sapiens interferon-responsive
finger protein 1 short form protein.
Length = 270
Score = 36.3 bits (80), Expect = 0.20
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+TCP+C P+SL CGH+LCR C+
Sbjct: 13 VTCPICLELL----TEPLSLDCGHSLCRACI 39
>AB039903-1|BAB17050.1| 842|Homo sapiens interferon-responsive
finger protein 1 long form protein.
Length = 842
Score = 36.3 bits (80), Expect = 0.20
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+TCP+C P+SL CGH+LCR C+
Sbjct: 367 VTCPICLELL----TEPLSLDCGHSLCRACI 393
Score = 32.3 bits (70), Expect = 3.3
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+TCP+C P+S+ CGH+ C+ C+
Sbjct: 41 VTCPICLELL----TEPLSIDCGHSFCQACI 67
>AB039902-1|BAB17049.1| 488|Homo sapiens interferon-responsive
finger protein 1 middle form protein.
Length = 488
Score = 36.3 bits (80), Expect = 0.20
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+TCP+C P+SL CGH+LCR C+
Sbjct: 13 VTCPICLELL----TEPLSLDCGHSLCRACI 39
>D21205-1|BAA04747.1| 630|Homo sapiens estrogen responsive finger
protein protein.
Length = 630
Score = 35.9 bits (79), Expect = 0.27
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 18/99 (18%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQ-----CPFDQTIIQVEPEELVV 66
L+C +C F + P++ CGH C CL Q CP + + Q P +L
Sbjct: 11 LSCSICLEPF----KEPVTTPCGHNFCGSCLNETWAVQGSPYLCPQCRAVYQARP-QLHK 65
Query: 67 NTALLQLA--------GYAPPSQPYQPPCIKALPESDRQ 97
NT L + PP+ + PP + P + Q
Sbjct: 66 NTVLCNVVEQFLQADLAREPPADVWTPPARASAPSPNAQ 104
>DQ307286-1|ABC25188.1| 269|Homo sapiens plenty of SH3s-2
protein.
Length = 269
Score = 35.9 bits (79), Expect = 0.27
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL----HRKQCPFDQTIIQVEPEELV 65
D L C VC + L C HT CR CL + H +CP + ++ +EL
Sbjct: 8 DLLECSVCLERLDTTAKV---LPCQHTFCRRCLESIVCSRHELRCPECRILVGCGVDELP 64
Query: 66 VNTALLQL 73
N L++L
Sbjct: 65 ANILLVRL 72
>BC042541-1|AAH42541.1| 630|Homo sapiens tripartite
motif-containing 25 protein.
Length = 630
Score = 35.9 bits (79), Expect = 0.27
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 18/99 (18%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQ-----CPFDQTIIQVEPEELVV 66
L+C +C F + P++ CGH C CL Q CP + + Q P +L
Sbjct: 11 LSCSICLEPF----KEPVTTPCGHNFCGSCLNETWAVQGSPYLCPQCRAVYQARP-QLHK 65
Query: 67 NTALLQLA--------GYAPPSQPYQPPCIKALPESDRQ 97
NT L + PP+ + PP + P + Q
Sbjct: 66 NTVLCNVVEQFLQADLAREPPADVWTPPARASAPSPNAQ 104
>BC033871-1|AAH33871.1| 249|Homo sapiens TRIM74 protein protein.
Length = 249
Score = 35.9 bits (79), Expect = 0.27
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 9/47 (19%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLI----HLHRK-QCP 51
D L CP+C F + + L CGH+ C+ CL+ HL K +CP
Sbjct: 12 DRLQCPICLEVF----KESLMLQCGHSYCKGCLVSLSYHLDTKVRCP 54
>BC033211-1|AAH33211.1| 269|Homo sapiens TRIM72 protein protein.
Length = 269
Score = 35.9 bits (79), Expect = 0.27
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
L+CP+C + F AP ++ CGH+ CR CL
Sbjct: 12 LSCPLCLQLFDAP----VTAECGHSFCRACL 38
>BC016924-1|AAH16924.1| 630|Homo sapiens tripartite
motif-containing 25 protein.
Length = 630
Score = 35.9 bits (79), Expect = 0.27
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 18/99 (18%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQ-----CPFDQTIIQVEPEELVV 66
L+C +C F + P++ CGH C CL Q CP + + Q P +L
Sbjct: 11 LSCSICLEPF----KEPVTTPCGHNFCGSCLNETWAVQGSPYLCPQCRAVYQARP-QLHK 65
Query: 67 NTALLQLA--------GYAPPSQPYQPPCIKALPESDRQ 97
NT L + PP+ + PP + P + Q
Sbjct: 66 NTVLCNVVEQFLQADLAREPPADVWTPPARASAPSPNAQ 104
>AK131485-1|BAD18630.1| 477|Homo sapiens protein ( Homo sapiens
cDNA FLJ16664 fis, clone THYMU2006001, weakly similar
to ZINC-BINDING PROTEIN A33. ).
Length = 477
Score = 35.9 bits (79), Expect = 0.27
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
L+CP+C + F AP ++ CGH+ CR CL
Sbjct: 12 LSCPLCLQLFDAP----VTAECGHSFCRACL 38
>AF498998-1|AAP30735.1| 250|Homo sapiens tripartite motif protein
TRIM50B protein.
Length = 250
Score = 35.9 bits (79), Expect = 0.27
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 9/47 (19%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLI----HLHRK-QCP 51
D L CP+C F + + L CGH+ C+ CL+ HL K +CP
Sbjct: 12 DRLQCPICLEVF----KESLMLQCGHSYCKGCLVSLSYHLDTKVRCP 54
>AB208994-1|BAD92231.1| 644|Homo sapiens tripartite
motif-containing 25 variant protein.
Length = 644
Score = 35.9 bits (79), Expect = 0.27
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 18/99 (18%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQ-----CPFDQTIIQVEPEELVV 66
L+C +C F + P++ CGH C CL Q CP + + Q P +L
Sbjct: 25 LSCSICLEPF----KEPVTTPCGHNFCGSCLNETWAVQGSPYLCPQCRAVYQARP-QLHK 79
Query: 67 NTALLQLA--------GYAPPSQPYQPPCIKALPESDRQ 97
NT L + PP+ + PP + P + Q
Sbjct: 80 NTVLCNVVEQFLQADLAREPPADGWTPPARASAPSPNAQ 118
>U13658-1|AAA79867.1| 475|Homo sapiens RO52 protein.
Length = 475
Score = 35.5 bits (78), Expect = 0.35
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 8 WTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
W + +TCP+C F P+S+ CGH+ C+ C+
Sbjct: 11 WEE-VTCPICLDPFV----EPVSIECGHSFCQECI 40
>U01882-1|AAB87094.1| 475|Homo sapiens 52 kda component of
SS-A/Ro autoantigen protein.
Length = 475
Score = 35.5 bits (78), Expect = 0.35
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 8 WTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
W + +TCP+C F P+S+ CGH+ C+ C+
Sbjct: 11 WEE-VTCPICLDPFV----EPVSIECGHSFCQECI 40
>M62800-1|AAA36651.1| 475|Homo sapiens 52-kD SS-A/Ro autoantigen
protein.
Length = 475
Score = 35.5 bits (78), Expect = 0.35
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 8 WTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
W + +TCP+C F P+S+ CGH+ C+ C+
Sbjct: 11 WEE-VTCPICLDPFV----EPVSIECGHSFCQECI 40
>M34551-1|AAA36581.1| 475|Homo sapiens protein ( Human 52-kD
ribonucleoprotein Ro/SSA mRNA, complete cds. ).
Length = 475
Score = 35.5 bits (78), Expect = 0.35
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 8 WTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
W + +TCP+C F P+S+ CGH+ C+ C+
Sbjct: 11 WEE-VTCPICLDPFV----EPVSIECGHSFCQECI 40
>BC013036-1|AAH13036.1| 192|Homo sapiens ring finger protein 183
protein.
Length = 192
Score = 35.5 bits (78), Expect = 0.35
Identities = 14/32 (43%), Positives = 16/32 (50%)
Query: 14 CPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 45
CPVC F +P L C H+ C CL HL
Sbjct: 13 CPVCWNPFNNTFHTPKMLDCCHSFCVECLAHL 44
>BC010861-1|AAH10861.1| 475|Homo sapiens tripartite
motif-containing 21 protein.
Length = 475
Score = 35.5 bits (78), Expect = 0.35
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 8 WTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
W + +TCP+C F P+S+ CGH+ C+ C+
Sbjct: 11 WEE-VTCPICLDPFV----EPVSIECGHSFCQECI 40
>AY742713-1|AAU89982.1| 475|Homo sapiens Sjogren syndrome antigen
A1 protein.
Length = 475
Score = 35.5 bits (78), Expect = 0.35
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 8 WTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
W + +TCP+C F P+S+ CGH+ C+ C+
Sbjct: 11 WEE-VTCPICLDPFV----EPVSIECGHSFCQECI 40
>AF391283-1|AAK76432.1| 475|Homo sapiens SSA1 protein.
Length = 475
Score = 35.5 bits (78), Expect = 0.35
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 8 WTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
W + +TCP+C F P+S+ CGH+ C+ C+
Sbjct: 11 WEE-VTCPICLDPFV----EPVSIECGHSFCQECI 40
>D87458-1|BAA13398.2| 711|Homo sapiens KIAA0282 protein.
Length = 711
Score = 35.1 bits (77), Expect = 0.46
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 2 PIQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHC 41
P+ + + L CPVC G+ R PI L C H LC+ C
Sbjct: 45 PVPMEEMEEELKCPVC----GSFYREPIILPCSHNLCQAC 80
>DQ301458-1|ABC01011.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 35.1 bits (77), Expect = 0.46
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL ++K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANYKK 45
>DQ301456-1|ABC01009.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 35.1 bits (77), Expect = 0.46
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 48
+TCP+C P+SL CGH+ C+ CL ++K
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACLTANYKK 45
>BC132867-1|AAI32868.1| 511|Homo sapiens tripartite
motif-containing 7 protein.
Length = 511
Score = 35.1 bits (77), Expect = 0.46
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TC +C F R P+S+ CGH+ CR C+
Sbjct: 28 TCSICLELF----REPVSVECGHSFCRACI 53
>BC132863-1|AAI32864.1| 511|Homo sapiens tripartite
motif-containing 7 protein.
Length = 511
Score = 35.1 bits (77), Expect = 0.46
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TC +C F R P+S+ CGH+ CR C+
Sbjct: 28 TCSICLELF----REPVSVECGHSFCRACI 53
>BC080553-1|AAH80553.1| 221|Homo sapiens tripartite
motif-containing 7 protein.
Length = 221
Score = 35.1 bits (77), Expect = 0.46
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TC +C F R P+S+ CGH+ CR C+
Sbjct: 28 TCSICLELF----REPVSVECGHSFCRACI 53
>BC011567-1|AAH11567.1| 221|Homo sapiens tripartite
motif-containing 7 protein.
Length = 221
Score = 35.1 bits (77), Expect = 0.46
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TC +C F R P+S+ CGH+ CR C+
Sbjct: 28 TCSICLELF----REPVSVECGHSFCRACI 53
>AF396651-1|AAK85377.1| 511|Homo sapiens glycogenin-interacting
protein 1 protein.
Length = 511
Score = 35.1 bits (77), Expect = 0.46
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TC +C F R P+S+ CGH+ CR C+
Sbjct: 28 TCSICLELF----REPVSVECGHSFCRACI 53
>AF220032-1|AAG53486.1| 221|Homo sapiens tripartite motif protein
TRIM7 protein.
Length = 221
Score = 35.1 bits (77), Expect = 0.46
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TC +C F R P+S+ CGH+ CR C+
Sbjct: 28 TCSICLELF----REPVSVECGHSFCRACI 53
>Y07829-1|CAB52384.1| 481|Homo sapiens RING finger protein
protein.
Length = 481
Score = 34.7 bits (76), Expect = 0.61
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
D + CP+C R P+++ CGH CR CL
Sbjct: 12 DEVNCPICQGTL----REPVTIDCGHNFCRACL 40
>BX005441-5|CAM26238.1| 481|Homo sapiens tripartite
motif-containing 10 protein.
Length = 481
Score = 34.7 bits (76), Expect = 0.61
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
D + CP+C R P+++ CGH CR CL
Sbjct: 12 DEVNCPICQGTL----REPVTIDCGHNFCRACL 40
>BX005441-4|CAM26237.1| 395|Homo sapiens tripartite
motif-containing 10 protein.
Length = 395
Score = 34.7 bits (76), Expect = 0.61
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
D + CP+C R P+++ CGH CR CL
Sbjct: 12 DEVNCPICQGTL----REPVTIDCGHNFCRACL 40
>BC126472-1|AAI26473.1| 452|Homo sapiens tripartite
motif-containing 49 protein.
Length = 452
Score = 34.7 bits (76), Expect = 0.61
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPF 52
L CP+C F P+++ CGH+ CR C +L+ + PF
Sbjct: 13 LICPLCMNYF----IDPVTIDCGHSFCRPC-FYLNWQDIPF 48
>BC126470-1|AAI26471.1| 452|Homo sapiens tripartite
motif-containing 49 protein.
Length = 452
Score = 34.7 bits (76), Expect = 0.61
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPF 52
L CP+C F P+++ CGH+ CR C +L+ + PF
Sbjct: 13 LICPLCMNYF----IDPVTIDCGHSFCRPC-FYLNWQDIPF 48
>BC113419-1|AAI13420.1| 395|Homo sapiens tripartite
motif-containing 10 protein.
Length = 395
Score = 34.7 bits (76), Expect = 0.61
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
D + CP+C R P+++ CGH CR CL
Sbjct: 12 DEVNCPICQGTL----REPVTIDCGHNFCRACL 40
>BC093926-1|AAH93926.1| 395|Homo sapiens tripartite
motif-containing 10 protein.
Length = 395
Score = 34.7 bits (76), Expect = 0.61
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
D + CP+C R P+++ CGH CR CL
Sbjct: 12 DEVNCPICQGTL----REPVTIDCGHNFCRACL 40
>BC075020-1|AAH75020.1| 452|Homo sapiens ring finger protein 18
protein.
Length = 452
Score = 34.7 bits (76), Expect = 0.61
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPF 52
L CP+C F P+++ CGH+ CR C +L+ + PF
Sbjct: 13 LICPLCMNYF----IDPVTIDCGHSFCRPC-FYLNWQDIPF 48
>BC075019-1|AAH75019.1| 452|Homo sapiens tripartite
motif-containing 49 protein.
Length = 452
Score = 34.7 bits (76), Expect = 0.61
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPF 52
L CP+C F P+++ CGH+ CR C +L+ + PF
Sbjct: 13 LICPLCMNYF----IDPVTIDCGHSFCRPC-FYLNWQDIPF 48
>BA000025-88|BAB63332.1| 481|Homo sapiens RNF9 protein.
Length = 481
Score = 34.7 bits (76), Expect = 0.61
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
D + CP+C R P+++ CGH CR CL
Sbjct: 12 DEVNCPICQGTL----REPVTIDCGHNFCRACL 40
>AL844220-2|CAI18610.1| 481|Homo sapiens tripartite
motif-containing 10 protein.
Length = 481
Score = 34.7 bits (76), Expect = 0.61
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
D + CP+C R P+++ CGH CR CL
Sbjct: 12 DEVNCPICQGTL----REPVTIDCGHNFCRACL 40
>AL844220-1|CAI18609.1| 395|Homo sapiens tripartite
motif-containing 10 protein.
Length = 395
Score = 34.7 bits (76), Expect = 0.61
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
D + CP+C R P+++ CGH CR CL
Sbjct: 12 DEVNCPICQGTL----REPVTIDCGHNFCRACL 40
>AL671859-11|CAI17587.1| 481|Homo sapiens tripartite
motif-containing 10 protein.
Length = 481
Score = 34.7 bits (76), Expect = 0.61
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
D + CP+C R P+++ CGH CR CL
Sbjct: 12 DEVNCPICQGTL----REPVTIDCGHNFCRACL 40
>AL671859-10|CAI17586.1| 395|Homo sapiens tripartite
motif-containing 10 protein.
Length = 395
Score = 34.7 bits (76), Expect = 0.61
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
D + CP+C R P+++ CGH CR CL
Sbjct: 12 DEVNCPICQGTL----REPVTIDCGHNFCRACL 40
>AL669914-11|CAI18188.1| 481|Homo sapiens tripartite
motif-containing 10 protein.
Length = 481
Score = 34.7 bits (76), Expect = 0.61
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
D + CP+C R P+++ CGH CR CL
Sbjct: 12 DEVNCPICQGTL----REPVTIDCGHNFCRACL 40
>AL669914-10|CAI18187.1| 395|Homo sapiens tripartite
motif-containing 10 protein.
Length = 395
Score = 34.7 bits (76), Expect = 0.61
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
D + CP+C R P+++ CGH CR CL
Sbjct: 12 DEVNCPICQGTL----REPVTIDCGHNFCRACL 40
>AF220123-1|AAG53496.1| 396|Homo sapiens tripartite motif protein
TRIM10 beta protein.
Length = 396
Score = 34.7 bits (76), Expect = 0.61
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
D + CP+C R P+++ CGH CR CL
Sbjct: 12 DEVNCPICQGTL----REPVTIDCGHNFCRACL 40
>AF220122-1|AAG53495.1| 482|Homo sapiens tripartite motif protein
TRIM10 alpha protein.
Length = 482
Score = 34.7 bits (76), Expect = 0.61
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
D + CP+C R P+++ CGH CR CL
Sbjct: 12 DEVNCPICQGTL----REPVTIDCGHNFCRACL 40
>AB202085-1|BAE78605.1| 481|Homo sapiens tripartite
motif-containing 10 protein.
Length = 481
Score = 34.7 bits (76), Expect = 0.61
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
D + CP+C R P+++ CGH CR CL
Sbjct: 12 DEVNCPICQGTL----REPVTIDCGHNFCRACL 40
>AB103595-1|BAF31256.1| 481|Homo sapiens Zn-finger protein
protein.
Length = 481
Score = 34.7 bits (76), Expect = 0.61
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
D + CP+C R P+++ CGH CR CL
Sbjct: 12 DEVNCPICQGTL----REPVTIDCGHNFCRACL 40
>AB088089-1|BAC54921.1| 481|Homo sapiens tripartite
motif-containing 10 protein.
Length = 481
Score = 34.7 bits (76), Expect = 0.61
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
D + CP+C R P+++ CGH CR CL
Sbjct: 12 DEVNCPICQGTL----REPVTIDCGHNFCRACL 40
>AB037682-1|BAB03503.1| 452|Homo sapiens testis-specific RING
Finger protein protein.
Length = 452
Score = 34.7 bits (76), Expect = 0.61
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPF 52
L CP+C F P+++ CGH+ CR C +L+ + PF
Sbjct: 13 LICPLCMNYF----IDPVTIDCGHSFCRPC-FYLNWQDIPF 48
>Y13667-1|CAA74018.1| 667|Homo sapiens putative transcription
factor XPRF protein.
Length = 667
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTI 56
LTCP+C F P+ L C H+LC +C + C ++++
Sbjct: 8 LTCPICLELF----EDPLLLPCAHSLCFNCAHRILVSHCATNESV 48
>X80200-1|CAA56491.1| 470|Homo sapiens cystein rich domain
associated to RING and TRAF protein protein.
Length = 470
Score = 34.3 bits (75), Expect = 0.81
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 8/47 (17%)
Query: 12 LTCPVCCREFGAPPRSPISLS-CGHTLCRHCLIHLHRK---QCPFDQ 54
L CP+C G P R P+ +S CGH C CL + +CP DQ
Sbjct: 16 LLCPLC----GKPMREPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQ 58
>DQ323999-1|ABC40750.1| 470|Homo sapiens TNF receptor-associated
factor 4 protein.
Length = 470
Score = 34.3 bits (75), Expect = 0.81
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 8/47 (17%)
Query: 12 LTCPVCCREFGAPPRSPISLS-CGHTLCRHCLIHLHRK---QCPFDQ 54
L CP+C G P R P+ +S CGH C CL + +CP DQ
Sbjct: 16 LLCPLC----GKPMREPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQ 58
>BX537987-1|CAD97947.1| 323|Homo sapiens hypothetical protein
protein.
Length = 323
Score = 34.3 bits (75), Expect = 0.81
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
LTCP+C F P L C HT CR+CL
Sbjct: 8 LTCPICYSIF----EDPRVLPCSHTFCRNCL 34
>BC125107-1|AAI25108.1| 729|Homo sapiens SH3 domain containing
ring finger 2 protein.
Length = 729
Score = 34.3 bits (75), Expect = 0.81
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL---IHLHRK-QCPFDQTIIQVEPEELV 65
D L CPVC + + L C HT C+ CL H++ +CP +T + E L
Sbjct: 8 DLLECPVCFEKLDVTAKV---LPCQHTFCKPCLQRVFKAHKELRCPECRTPVFSNIEALP 64
Query: 66 VNTALLQL 73
N L++L
Sbjct: 65 ANLLLVRL 72
>BC125106-1|AAI25107.1| 729|Homo sapiens SH3 domain containing
ring finger 2 protein.
Length = 729
Score = 34.3 bits (75), Expect = 0.81
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL---IHLHRK-QCPFDQTIIQVEPEELV 65
D L CPVC + + L C HT C+ CL H++ +CP +T + E L
Sbjct: 8 DLLECPVCFEKLDVTAKV---LPCQHTFCKPCLQRVFKAHKELRCPECRTPVFSNIEALP 64
Query: 66 VNTALLQL 73
N L++L
Sbjct: 65 ANLLLVRL 72
>BC109260-1|AAI09261.1| 403|Homo sapiens tripartite
motif-containing 59 protein.
Length = 403
Score = 34.3 bits (75), Expect = 0.81
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
LTCP+C F P L C HT CR+CL
Sbjct: 8 LTCPICYSIF----EDPRVLPCSHTFCRNCL 34
>BC109259-1|AAI09260.1| 403|Homo sapiens tripartite
motif-containing 59 protein.
Length = 403
Score = 34.3 bits (75), Expect = 0.81
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
LTCP+C F P L C HT CR+CL
Sbjct: 8 LTCPICYSIF----EDPRVLPCSHTFCRNCL 34
>BC063407-1|AAH63407.1| 407|Homo sapiens tripartite
motif-containing 13 protein.
Length = 407
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
LTCP+CC F P L C H C+ CL
Sbjct: 8 LTCPICCSLFD----DPRVLPCSHNFCKKCL 34
>BC053626-1|AAH53626.1| 667|Homo sapiens midline 1 (Opitz/BBB
syndrome) protein.
Length = 667
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTI 56
LTCP+C F P+ L C H+LC +C + C ++++
Sbjct: 8 LTCPICLELF----EDPLLLPCAHSLCFNCAHRILVSHCATNESV 48
>BC003579-1|AAH03579.1| 407|Homo sapiens tripartite
motif-containing 13 protein.
Length = 407
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
LTCP+CC F P L C H C+ CL
Sbjct: 8 LTCPICCSLFD----DPRVLPCSHNFCKKCL 34
>BC001769-1|AAH01769.1| 470|Homo sapiens TNF receptor-associated
factor 4 protein.
Length = 470
Score = 34.3 bits (75), Expect = 0.81
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 8/47 (17%)
Query: 12 LTCPVCCREFGAPPRSPISLS-CGHTLCRHCLIHLHRK---QCPFDQ 54
L CP+C G P R P+ +S CGH C CL + +CP DQ
Sbjct: 16 LLCPLC----GKPMREPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQ 58
>AY937224-1|AAY16990.1| 195|Homo sapiens TRAF4 variant 5 protein.
Length = 195
Score = 34.3 bits (75), Expect = 0.81
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 8/47 (17%)
Query: 12 LTCPVCCREFGAPPRSPISLS-CGHTLCRHCLIHLHRK---QCPFDQ 54
L CP+C G P R P+ +S CGH C CL + +CP DQ
Sbjct: 16 LLCPLC----GKPMREPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQ 58
>AY937223-1|AAY16989.1| 128|Homo sapiens TRAF4 variant 4 protein.
Length = 128
Score = 34.3 bits (75), Expect = 0.81
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 8/47 (17%)
Query: 12 LTCPVCCREFGAPPRSPISLS-CGHTLCRHCLIHLHRK---QCPFDQ 54
L CP+C G P R P+ +S CGH C CL + +CP DQ
Sbjct: 16 LLCPLC----GKPMREPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQ 58
>AY764035-1|AAV51406.1| 410|Homo sapiens candidate tumor
suppressor RFP2 protein.
Length = 410
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
LTCP+CC F P L C H C+ CL
Sbjct: 11 LTCPICCSLFD----DPRVLPCSHNFCKKCL 37
>AY455758-1|AAR31110.1| 407|Homo sapiens leu5 protein.
Length = 407
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
LTCP+CC F P L C H C+ CL
Sbjct: 8 LTCPICCSLFD----DPRVLPCSHNFCKKCL 34
>AY191002-1|AAO38979.1| 407|Homo sapiens ret finger protein 2
transcript variant 1 protein.
Length = 407
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
LTCP+CC F P L C H C+ CL
Sbjct: 8 LTCPICCSLFD----DPRVLPCSHNFCKKCL 34
>AY159379-1|AAN86853.1| 403|Homo sapiens tumor suppressor TSBF1
protein.
Length = 403
Score = 34.3 bits (75), Expect = 0.81
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
LTCP+C F P L C HT CR+CL
Sbjct: 8 LTCPICYSIF----EDPRVLPCSHTFCRNCL 34
>AY026763-1|AAK07687.1| 638|Homo sapiens gene overexpressed in
astrocytoma protein.
Length = 638
Score = 34.3 bits (75), Expect = 0.81
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+CP+C P R P++L CGH C CL
Sbjct: 8 SCPICLE----PLREPVTLPCGHNFCLACL 33
>AL137060-3|CAC43391.1| 407|Homo sapiens tripartite
motif-containing 13 protein.
Length = 407
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
LTCP+CC F P L C H C+ CL
Sbjct: 8 LTCPICCSLFD----DPRVLPCSHNFCKKCL 34
>AL137060-2|CAH72826.1| 266|Homo sapiens tripartite
motif-containing 13 protein.
Length = 266
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
LTCP+CC F P L C H C+ CL
Sbjct: 8 LTCPICCSLFD----DPRVLPCSHNFCKKCL 34
>AL137060-1|CAH72825.1| 129|Homo sapiens tripartite
motif-containing 13 protein.
Length = 129
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
LTCP+CC F P L C H C+ CL
Sbjct: 8 LTCPICCSLFD----DPRVLPCSHNFCKKCL 34
>AK074234-1|BAB85025.1| 457|Homo sapiens protein ( Homo sapiens
cDNA FLJ23654 fis, clone COL10108. ).
Length = 457
Score = 34.3 bits (75), Expect = 0.81
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL---IHLHRK-QCPFDQTIIQVEPEELV 65
D L CPVC + + L C HT C+ CL H++ +CP +T + E L
Sbjct: 8 DLLECPVCFEKLDVTAKV---LPCQHTFCKPCLQRVFKAHKELRCPECRTPVFSNIEALP 64
Query: 66 VNTALLQL 73
N L++L
Sbjct: 65 ANLLLVRL 72
>AJ224819-1|CAA12136.1| 407|Homo sapiens tumor suppressor
protein.
Length = 407
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
LTCP+CC F P L C H C+ CL
Sbjct: 8 LTCPICCSLFD----DPRVLPCSHNFCKKCL 34
>AF279660-1|AAK13059.1| 407|Homo sapiens CAR protein.
Length = 407
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
LTCP+CC F P L C H C+ CL
Sbjct: 8 LTCPICCSLFD----DPRVLPCSHNFCKKCL 34
>AF269101-1|AAG33130.1| 667|Homo sapiens midline 1 protein.
Length = 667
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTI 56
LTCP+C F P+ L C H+LC +C + C ++++
Sbjct: 8 LTCPICLELF----EDPLLLPCAHSLCFNCAHRILVSHCATNESV 48
>AF241850-1|AAF91315.1| 407|Homo sapiens ret finger protein 2
protein.
Length = 407
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
LTCP+CC F P L C H C+ CL
Sbjct: 8 LTCPICCSLFD----DPRVLPCSHNFCKKCL 34
>AF241849-2|ABE41638.1| 407|Homo sapiens putative tumor
suppressor RFP2 protein.
Length = 407
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
LTCP+CC F P L C H C+ CL
Sbjct: 8 LTCPICCSLFD----DPRVLPCSHNFCKKCL 34
>AF241849-1|AAK51624.1| 407|Homo sapiens putative tumor
suppressor RFP2 protein.
Length = 407
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
LTCP+CC F P L C H C+ CL
Sbjct: 8 LTCPICCSLFD----DPRVLPCSHNFCKKCL 34
>AF230977-1|AAG50192.1| 552|Homo sapiens tripartite motif protein
TRIM18 beta protein.
Length = 552
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTI 56
LTCP+C F P+ L C H+LC +C + C ++++
Sbjct: 8 LTCPICLELF----EDPLLLPCAHSLCFNCAHRILVSHCATNESV 48
>AF230976-1|AAG50191.1| 667|Homo sapiens tripartite motif protein
TRIM18 alpha protein.
Length = 667
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTI 56
LTCP+C F P+ L C H+LC +C + C ++++
Sbjct: 8 LTCPICLELF----EDPLLLPCAHSLCFNCAHRILVSHCATNESV 48
>AF220128-1|AAG53501.1| 175|Homo sapiens tripartite motif protein
TRIM13 beta protein.
Length = 175
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
LTCP+CC F P L C H C+ CL
Sbjct: 8 LTCPICCSLFD----DPRVLPCSHNFCKKCL 34
>AF220127-1|AAG53500.1| 407|Homo sapiens tripartite motif protein
TRIM13 alpha protein.
Length = 407
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
LTCP+CC F P L C H C+ CL
Sbjct: 8 LTCPICCSLFD----DPRVLPCSHNFCKKCL 34
>AF082185-1|AAC32376.1| 198|Homo sapiens tumor necrosis factor
receptor-associated factor 4A protein.
Length = 198
Score = 34.3 bits (75), Expect = 0.81
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 8/47 (17%)
Query: 12 LTCPVCCREFGAPPRSPISLS-CGHTLCRHCLIHLHRK---QCPFDQ 54
L CP+C G P R P+ +S CGH C CL + +CP DQ
Sbjct: 16 LLCPLC----GKPMREPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQ 58
>AF041209-1|AAC33001.1| 667|Homo sapiens midline 1 fetal kidney
isoform 2 protein.
Length = 667
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTI 56
LTCP+C F P+ L C H+LC +C + C ++++
Sbjct: 8 LTCPICLELF----EDPLLLPCAHSLCFNCAHRILVSHCATNESV 48
>AF041208-1|AAC33000.1| 667|Homo sapiens midline 1 fetal kidney
isoform 1 protein.
Length = 667
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTI 56
LTCP+C F P+ L C H+LC +C + C ++++
Sbjct: 8 LTCPICLELF----EDPLLLPCAHSLCFNCAHRILVSHCATNESV 48
>AF041207-1|AAC32999.1| 228|Homo sapiens midline 1 cerebellar
isoform 2 protein.
Length = 228
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTI 56
LTCP+C F P+ L C H+LC +C + C ++++
Sbjct: 8 LTCPICLELF----EDPLLLPCAHSLCFNCAHRILVSHCATNESV 48
>AF041206-1|AAC32998.1| 484|Homo sapiens midline 1 cerebellar
isoform 1 protein.
Length = 484
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTI 56
LTCP+C F P+ L C H+LC +C + C ++++
Sbjct: 8 LTCPICLELF----EDPLLLPCAHSLCFNCAHRILVSHCATNESV 48
>AF035360-1|AAB99951.1| 667|Homo sapiens ring finger protein
protein.
Length = 667
Score = 34.3 bits (75), Expect = 0.81
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTI 56
LTCP+C F P+ L C H+LC +C + C ++++
Sbjct: 8 LTCPICLELF----EDPLLLPCAHSLCFNCAHRILVSHCATNESV 48
>Z84476-1|CAI19959.1| 513|Homo sapiens ret finger protein
protein.
Length = 513
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TCPVC + F P+ L CGH +C CL
Sbjct: 15 TCPVCLQYFA----EPMMLDCGHNICCACL 40
>Z84474-1|CAB06480.2| 513|Homo sapiens ret finger protein
protein.
Length = 513
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TCPVC + F P+ L CGH +C CL
Sbjct: 15 TCPVCLQYFA----EPMMLDCGHNICCACL 40
>M16029-1|AAA36786.1| 805|Homo sapiens protein ( Human ret mRNA
encoding a tyrosine kinase, partial cds. ).
Length = 805
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TCPVC + F P+ L CGH +C CL
Sbjct: 19 TCPVCLQYFA----EPMMLDCGHNICCACL 44
>J03407-1|AAA36564.1| 513|Homo sapiens protein ( Human rfp
transforming protein mRNA, complete cds. ).
Length = 513
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TCPVC + F P+ L CGH +C CL
Sbjct: 15 TCPVCLQYFA----EPMMLDCGHNICCACL 40
>DQ301476-1|ABC01029.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 33.9 bits (74), Expect = 1.1
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+TCP+C P+SL CGH+ C+ CL
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACL 39
>DQ301468-1|ABC01021.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 33.9 bits (74), Expect = 1.1
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+TCP+C P+SL CGH+ C+ CL
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACL 39
>DQ301467-1|ABC01020.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 33.9 bits (74), Expect = 1.1
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+TCP+C P+SL CGH+ C+ CL
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACL 39
>DQ301466-1|ABC01019.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 33.9 bits (74), Expect = 1.1
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+TCP+C P+SL CGH+ C+ CL
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACL 39
>DQ301465-1|ABC01018.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 33.9 bits (74), Expect = 1.1
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+TCP+C P+SL CGH+ C+ CL
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACL 39
>DQ301463-1|ABC01016.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 33.9 bits (74), Expect = 1.1
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+TCP+C P+SL CGH+ C+ CL
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACL 39
>DQ301461-1|ABC01014.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 33.9 bits (74), Expect = 1.1
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+TCP+C P+SL CGH+ C+ CL
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACL 39
>DQ301460-1|ABC01013.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 33.9 bits (74), Expect = 1.1
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+TCP+C P+SL CGH+ C+ CL
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACL 39
>DQ301459-1|ABC01012.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 33.9 bits (74), Expect = 1.1
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+TCP+C P+SL CGH+ C+ CL
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACL 39
>DQ301452-1|ABC01005.1| 493|Homo sapiens TRIM5 protein.
Length = 493
Score = 33.9 bits (74), Expect = 1.1
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+TCP+C P+SL CGH+ C+ CL
Sbjct: 13 VTCPICLELL----TQPLSLDCGHSFCQACL 39
>BX537153-2|CAI18646.1| 513|Homo sapiens tripartite
motif-containing 27 protein.
Length = 513
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TCPVC + F P+ L CGH +C CL
Sbjct: 15 TCPVCLQYFA----EPMMLDCGHNICCACL 40
>BX537153-1|CAI18645.1| 358|Homo sapiens tripartite
motif-containing 27 protein.
Length = 358
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TCPVC + F P+ L CGH +C CL
Sbjct: 15 TCPVCLQYFA----EPMMLDCGHNICCACL 40
>BX119924-2|CAM26231.1| 513|Homo sapiens ret finger protein
protein.
Length = 513
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TCPVC + F P+ L CGH +C CL
Sbjct: 15 TCPVCLQYFA----EPMMLDCGHNICCACL 40
>BX119924-1|CAM26230.1| 358|Homo sapiens ret finger protein
protein.
Length = 358
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TCPVC + F P+ L CGH +C CL
Sbjct: 15 TCPVCLQYFA----EPMMLDCGHNICCACL 40
>BX005144-2|CAM25872.1| 513|Homo sapiens ret finger protein
protein.
Length = 513
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TCPVC + F P+ L CGH +C CL
Sbjct: 15 TCPVCLQYFA----EPMMLDCGHNICCACL 40
>BX005144-1|CAM25871.1| 358|Homo sapiens ret finger protein
protein.
Length = 358
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TCPVC + F P+ L CGH +C CL
Sbjct: 15 TCPVCLQYFA----EPMMLDCGHNICCACL 40
>BX000360-2|CAI18619.1| 513|Homo sapiens tripartite
motif-containing 27 protein.
Length = 513
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TCPVC + F P+ L CGH +C CL
Sbjct: 15 TCPVCLQYFA----EPMMLDCGHNICCACL 40
>BX000360-1|CAI18618.1| 358|Homo sapiens tripartite
motif-containing 27 protein.
Length = 358
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TCPVC + F P+ L CGH +C CL
Sbjct: 15 TCPVCLQYFA----EPMMLDCGHNICCACL 40
>BC127195-1|AAI27196.1| 110|Homo sapiens TRIM41 protein protein.
Length = 110
Score = 33.9 bits (74), Expect = 1.1
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 2 PIQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTIIQVEP 61
P+Q Q + C +C F P+S+ CGH CR C+ L + D+ + E
Sbjct: 10 PVQTLQ--EEAVCAICLDYF----TDPVSIGCGHNFCRVCVTQLWGGEDEEDRDELDREE 63
Query: 62 EE 63
EE
Sbjct: 64 EE 65
>BC103491-1|AAI03492.1| 718|Homo sapiens LON peptidase N-terminal
domain and ring finger 3 protein.
Length = 718
Score = 33.9 bits (74), Expect = 1.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 18 CREFGAPPRSPISLSCGHTLCRHCL 42
CR+ P+SLSCGHT C+ CL
Sbjct: 158 CRKCHGFLSDPVSLSCGHTFCKLCL 182
Score = 33.5 bits (73), Expect = 1.4
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL--HRKQCP 51
L C +C R F P +P CGHT C CL H +CP
Sbjct: 424 LECALCMRLFYEPVTTP----CGHTFCLKCLERCLDHNAKCP 461
>BC100986-1|AAI00987.1| 471|Homo sapiens TRIM60 protein protein.
Length = 471
Score = 33.9 bits (74), Expect = 1.1
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+CP+C + P++++CGH CR CL
Sbjct: 15 SCPICLEYL----KDPVTINCGHNFCRSCL 40
>BC100985-1|AAI00986.1| 471|Homo sapiens tripartite
motif-containing 60 protein.
Length = 471
Score = 33.9 bits (74), Expect = 1.1
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+CP+C + P++++CGH CR CL
Sbjct: 15 SCPICLEYL----KDPVTINCGHNFCRSCL 40
>BC100984-1|AAI00985.1| 471|Homo sapiens tripartite
motif-containing 60 protein.
Length = 471
Score = 33.9 bits (74), Expect = 1.1
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+CP+C + P++++CGH CR CL
Sbjct: 15 SCPICLEYL----KDPVTINCGHNFCRSCL 40
>BC100983-1|AAI00984.1| 471|Homo sapiens tripartite
motif-containing 60 protein.
Length = 471
Score = 33.9 bits (74), Expect = 1.1
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+CP+C + P++++CGH CR CL
Sbjct: 15 SCPICLEYL----KDPVTINCGHNFCRSCL 40
>BC100671-1|AAI00672.1| 759|Homo sapiens LON peptidase N-terminal
domain and ring finger 3 protein.
Length = 759
Score = 33.9 bits (74), Expect = 1.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 18 CREFGAPPRSPISLSCGHTLCRHCL 42
CR+ P+SLSCGHT C+ CL
Sbjct: 158 CRKCHGFLSDPVSLSCGHTFCKLCL 182
Score = 33.5 bits (73), Expect = 1.4
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL--HRKQCP 51
L C +C R F P +P CGHT C CL H +CP
Sbjct: 465 LECALCMRLFYEPVTTP----CGHTFCLKCLERCLDHNAKCP 502
>BC099847-1|AAH99847.1| 759|Homo sapiens LON peptidase N-terminal
domain and ring finger 3 protein.
Length = 759
Score = 33.9 bits (74), Expect = 1.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 18 CREFGAPPRSPISLSCGHTLCRHCL 42
CR+ P+SLSCGHT C+ CL
Sbjct: 158 CRKCHGFLSDPVSLSCGHTFCKLCL 182
Score = 33.5 bits (73), Expect = 1.4
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL--HRKQCP 51
L C +C R F P +P CGHT C CL H +CP
Sbjct: 465 LECALCMRLFYEPVTTP----CGHTFCLKCLERCLDHNAKCP 502
>BC090953-1|AAH90953.1| 630|Homo sapiens tripartite
motif-containing 41 protein.
Length = 630
Score = 33.9 bits (74), Expect = 1.1
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 2 PIQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTIIQVEP 61
P+Q Q + C +C F P+S+ CGH CR C+ L + D+ + E
Sbjct: 10 PVQTLQ--EEAVCAICLDYF----TDPVSIGCGHNFCRVCVTQLWGGEDEEDRDELDREE 63
Query: 62 EE 63
EE
Sbjct: 64 EE 65
>BC066924-1|AAH66924.1| 513|Homo sapiens tripartite
motif-containing 27 protein.
Length = 513
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TCPVC + F P+ L CGH +C CL
Sbjct: 15 TCPVCLQYFA----EPMMLDCGHNICCACL 40
>BC013580-1|AAH13580.1| 513|Homo sapiens tripartite
motif-containing 27 protein.
Length = 513
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TCPVC + F P+ L CGH +C CL
Sbjct: 15 TCPVCLQYFA----EPMMLDCGHNICCACL 40
>AL772284-2|CAI41519.1| 718|Homo sapiens LON peptidase N-terminal
domain and ring finger 3 protein.
Length = 718
Score = 33.9 bits (74), Expect = 1.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 18 CREFGAPPRSPISLSCGHTLCRHCL 42
CR+ P+SLSCGHT C+ CL
Sbjct: 158 CRKCHGFLSDPVSLSCGHTFCKLCL 182
Score = 33.5 bits (73), Expect = 1.4
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL--HRKQCP 51
L C +C R F P +P CGHT C CL H +CP
Sbjct: 424 LECALCMRLFYEPVTTP----CGHTFCLKCLERCLDHNAKCP 461
>AL662871-4|CAI18381.1| 513|Homo sapiens tripartite
motif-containing 27 protein.
Length = 513
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TCPVC + F P+ L CGH +C CL
Sbjct: 15 TCPVCLQYFA----EPMMLDCGHNICCACL 40
>AL662871-3|CAM25659.1| 358|Homo sapiens tripartite
motif-containing 27 protein.
Length = 358
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TCPVC + F P+ L CGH +C CL
Sbjct: 15 TCPVCLQYFA----EPMMLDCGHNICCACL 40
>AL662859-4|CAI17553.1| 513|Homo sapiens tripartite
motif-containing 27 protein.
Length = 513
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TCPVC + F P+ L CGH +C CL
Sbjct: 15 TCPVCLQYFA----EPMMLDCGHNICCACL 40
>AL662859-3|CAM24901.1| 358|Homo sapiens tripartite
motif-containing 27 protein.
Length = 358
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TCPVC + F P+ L CGH +C CL
Sbjct: 15 TCPVCLQYFA----EPMMLDCGHNICCACL 40
>AK093201-1|BAC04093.1| 471|Homo sapiens protein ( Homo sapiens
cDNA FLJ35882 fis, clone TESTI2008884, weakly similar
to ZINC-FINGER PROTEIN RFP. ).
Length = 471
Score = 33.9 bits (74), Expect = 1.1
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+CP+C + P++++CGH CR CL
Sbjct: 15 SCPICLEYL----KDPVTINCGHNFCRSCL 40
>AK091777-1|BAC03744.1| 610|Homo sapiens protein ( Homo sapiens
cDNA FLJ34458 fis, clone HLUNG2002811, weakly similar to
Zinc finger protein. ).
Length = 610
Score = 33.9 bits (74), Expect = 1.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 18 CREFGAPPRSPISLSCGHTLCRHCL 42
CR+ P+SLSCGHT C+ CL
Sbjct: 158 CRKCHGFLSDPVSLSCGHTFCKLCL 182
Score = 33.5 bits (73), Expect = 1.4
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL--HRKQCP 51
L C +C R F P +P CGHT C CL H +CP
Sbjct: 465 LECALCMRLFYEPVTTP----CGHTFCLKCLERCLDHNAKCP 502
>AF230394-1|AAG50173.1| 358|Homo sapiens tripartite motif protein
TRIM27 beta protein.
Length = 358
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TCPVC + F P+ L CGH +C CL
Sbjct: 15 TCPVCLQYFA----EPMMLDCGHNICCACL 40
>AF230393-1|AAG50172.1| 513|Homo sapiens tripartite motif protein
TRIM27 alpha protein.
Length = 513
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TCPVC + F P+ L CGH +C CL
Sbjct: 15 TCPVCLQYFA----EPMMLDCGHNICCACL 40
>AF171101-1|AAF32265.1| 47|Homo sapiens RFP transforming protein
protein.
Length = 47
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TCPVC + F P+ L CGH +C CL
Sbjct: 15 TCPVCLQYFA----EPMMLDCGHNICCACL 40
>AB209885-1|BAD93122.1| 382|Homo sapiens ret finger protein isoform
beta variant protein.
Length = 382
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
TCPVC + F P+ L CGH +C CL
Sbjct: 82 TCPVCLQYFA----EPMMLDCGHNICCACL 107
>AB100367-1|BAD07473.1| 518|Homo sapiens hypothetical protein
protein.
Length = 518
Score = 33.9 bits (74), Expect = 1.1
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 2 PIQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTIIQVEP 61
P+Q Q + C +C F P+S+ CGH CR C+ L + D+ + E
Sbjct: 10 PVQTLQ--EEAVCAICLDYF----TDPVSIGCGHNFCRVCVTQLWGGEDEEDRDELDREE 63
Query: 62 EE 63
EE
Sbjct: 64 EE 65
>AB100366-1|BAD07472.1| 630|Homo sapiens hypothetical protein
protein.
Length = 630
Score = 33.9 bits (74), Expect = 1.1
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 2 PIQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTIIQVEP 61
P+Q Q + C +C F P+S+ CGH CR C+ L + D+ + E
Sbjct: 10 PVQTLQ--EEAVCAICLDYF----TDPVSIGCGHNFCRVCVTQLWGGEDEEDRDELDREE 63
Query: 62 EE 63
EE
Sbjct: 64 EE 65
>DQ232883-1|ABB18376.1| 500|Homo sapiens tripartite motif protein
69 protein.
Length = 500
Score = 33.5 bits (73), Expect = 1.4
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQ 49
L CP+C F R P+ LSCGH C C+ R Q
Sbjct: 39 LHCPLCNDWF----RDPLMLSCGHNFCEACIQDFWRLQ 72
>BC111956-1|AAI11957.1| 203|Homo sapiens ring finger protein 152
protein.
Length = 203
Score = 33.5 bits (73), Expect = 1.4
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQ----CPFDQTIIQVEP 61
L C +C + +P R P L C HT C CL + Q CP+ + + ++ P
Sbjct: 10 LECQICFNYY-SPRRRPKLLDCKHTCCSVCLQQMRTSQKDVRCPWCRGVTKLPP 62
>BC094004-1|AAH94004.1| 203|Homo sapiens ring finger protein 152
protein.
Length = 203
Score = 33.5 bits (73), Expect = 1.4
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQ----CPFDQTIIQVEP 61
L C +C + +P R P L C HT C CL + Q CP+ + + ++ P
Sbjct: 10 LECQICFNYY-SPRRRPKLLDCKHTCCSVCLQQMRTSQKDVRCPWCRGVTKLPP 62
>BC050030-1|AAH50030.1| 247|Homo sapiens RNF182 protein protein.
Length = 247
Score = 33.5 bits (73), Expect = 1.4
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 7 QWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
Q +D L C +C + R P L C H +C CL
Sbjct: 13 QASDELECKICYNRYNLKQRKPKVLECCHRVCAKCL 48
>BC047945-1|AAH47945.1| 500|Homo sapiens tripartite
motif-containing 69 protein.
Length = 500
Score = 33.5 bits (73), Expect = 1.4
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQ 49
L CP+C F R P+ LSCGH C C+ R Q
Sbjct: 39 LHCPLCNDWF----RDPLMLSCGHNFCEACIQDFWRLQ 72
>BC036755-1|AAH36755.1| 690|Homo sapiens ligand of numb-protein X
2 protein.
Length = 690
Score = 33.5 bits (73), Expect = 1.4
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQ--CPFDQ 54
D L C +C + P P+ CGHT C CL + +++ CP D+
Sbjct: 46 DDLVCHICLQ----PLLQPLDTPCGHTFCYKCLRNFLQEKDFCPLDR 88
>BC030666-1|AAH30666.1| 247|Homo sapiens ring finger protein 182
protein.
Length = 247
Score = 33.5 bits (73), Expect = 1.4
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 7 QWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
Q +D L C +C + R P L C H +C CL
Sbjct: 13 QASDELECKICYNRYNLKQRKPKVLECCHRVCAKCL 48
>BC024199-1|AAH24199.1| 503|Homo sapiens TRIM69 protein protein.
Length = 503
Score = 33.5 bits (73), Expect = 1.4
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQ 49
L CP+C F R P+ LSCGH C C+ R Q
Sbjct: 39 LHCPLCNDWF----RDPLMLSCGHNFCEACIQDFWRLQ 72
>AL772284-3|CAI41520.1| 524|Homo sapiens LON peptidase N-terminal
domain and ring finger 3 protein.
Length = 524
Score = 33.5 bits (73), Expect = 1.4
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL--HRKQCP 51
L C +C R F P +P CGHT C CL H +CP
Sbjct: 230 LECALCMRLFYEPVTTP----CGHTFCLKCLERCLDHNAKCP 267
>AL138699-1|CAH73446.1| 690|Homo sapiens ligand of numb-protein X
2 protein.
Length = 690
Score = 33.5 bits (73), Expect = 1.4
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 10 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQ--CPFDQ 54
D L C +C + P P+ CGHT C CL + +++ CP D+
Sbjct: 46 DDLVCHICLQ----PLLQPLDTPCGHTFCYKCLRNFLQEKDFCPLDR 88
>AK096495-1|BAC04805.1| 203|Homo sapiens protein ( Homo sapiens
cDNA FLJ39176 fis, clone OCBBF2003744, weakly similar
to ZINC-FINGER PROTEIN HT2A. ).
Length = 203
Score = 33.5 bits (73), Expect = 1.4
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQ----CPFDQTIIQVEP 61
L C +C + +P R P L C HT C CL + Q CP+ + + ++ P
Sbjct: 10 LECQICFNYY-SPRRRPKLLDCKHTCCSVCLQQMRTSQKDVRCPWCRGVTKLPP 62
>AK090576-1|BAC03481.1| 247|Homo sapiens protein ( Homo sapiens
cDNA FLJ33257 fis, clone ASTRO2005593. ).
Length = 247
Score = 33.5 bits (73), Expect = 1.4
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 7 QWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
Q +D L C +C + R P L C H +C CL
Sbjct: 13 QASDELECKICYNRYNLKQRKPKVLECCHRVCAKCL 48
>AK026265-1|BAB15419.1| 516|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22612 fis, clone HSI04965. ).
Length = 516
Score = 33.5 bits (73), Expect = 1.4
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL--HRKQCP 51
L C +C R F P +P CGHT C CL H +CP
Sbjct: 222 LECALCMRLFYEPVTTP----CGHTFCLKCLERCLDHNAKCP 259
>Y18880-1|CAB56154.1| 715|Homo sapiens midline 2 protein protein.
Length = 715
Score = 33.1 bits (72), Expect = 1.9
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTI 56
LTCP+C F P+ L C H+LC C + C ++I
Sbjct: 8 LTCPICLELF----EDPLLLPCAHSLCFSCAHRILVSSCSSGESI 48
>X82200-1|CAA57684.1| 442|Homo sapiens gpStaf50 protein.
Length = 442
Score = 33.1 bits (72), Expect = 1.9
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+TCP+C P+SL CGH+ C+ C+
Sbjct: 13 VTCPICLELL----TEPLSLDCGHSFCQACI 39
>BT006663-1|AAP35309.1| 685|Homo sapiens midline 2 protein.
Length = 685
Score = 33.1 bits (72), Expect = 1.9
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTI 56
LTCP+C F P+ L C H+LC C + C ++I
Sbjct: 8 LTCPICLELF----EDPLLLPCAHSLCFSCAHRILVSSCSSGESI 48
>BC089393-1|AAH89393.1| 209|Homo sapiens tripartite
motif-containing 61 protein.
Length = 209
Score = 33.1 bits (72), Expect = 1.9
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 9/45 (20%)
Query: 13 TCPVCCREFGAPPRSPISLSCGHTLCRHCLI----HLHRK-QCPF 52
+CP+C + P+++SCGH C C+I LH CPF
Sbjct: 15 SCPICLDYL----KDPVTISCGHNFCLSCIIMSWKDLHDSFPCPF 55
>BC064636-1|AAH64636.1| 664|Homo sapiens ring finger protein 139
protein.
Length = 664
Score = 33.1 bits (72), Expect = 1.9
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 14 CPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTIIQVEPEELVVNTALLQL 73
C +C EF R H LC +++ + CP + +E +++ N+ +
Sbjct: 547 CAICYHEFTTSARITPCNHYFHALCLRKWLYI-QDTCPMCHQKVYIE-DDIKDNSNVSNN 604
Query: 74 AGYAPPSQPYQPPCIKALPESDRQ 97
G+ PP++ + +A ESDR+
Sbjct: 605 NGFIPPNETPEEAVREAAAESDRE 628
>BC035582-1|AAH35582.1| 498|Homo sapiens tripartite
motif-containing 22 protein.
Length = 498
Score = 33.1 bits (72), Expect = 1.9
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+TCP+C P+SL CGH+ C+ C+
Sbjct: 13 VTCPICLELL----TEPLSLDCGHSFCQACI 39
>BC022281-1|AAH22281.1| 498|Homo sapiens tripartite
motif-containing 22 protein.
Length = 498
Score = 33.1 bits (72), Expect = 1.9
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Query: 12 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 42
+TCP+C P+SL CGH+ C+ C+
Sbjct: 13 VTCPICLELL----TEPLSLDCGHSFCQACI 39
>BC021571-1|AAH21571.1| 664|Homo sapiens ring finger protein 139
protein.
Length = 664
Score = 33.1 bits (72), Expect = 1.9
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 14 CPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTIIQVEPEELVVNTALLQL 73
C +C EF R H LC +++ + CP + +E +++ N+ +
Sbjct: 547 CAICYHEFTTSARITPCNHYFHALCLRKWLYI-QDTCPMCHQKVYIE-DDIKDNSNVSNN 604
Query: 74 AGYAPPSQPYQPPCIKALPESDRQ 97
G+ PP++ + +A ESDR+
Sbjct: 605 NGFIPPNETPEEAVREAAAESDRE 628
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.131 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,183,735
Number of Sequences: 224733
Number of extensions: 2287241
Number of successful extensions: 7043
Number of sequences better than 10.0: 430
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 321
Number of HSP's that attempted gapping in prelim test: 6786
Number of HSP's gapped (non-prelim): 468
length of query: 418
length of database: 73,234,838
effective HSP length: 92
effective length of query: 326
effective length of database: 52,559,402
effective search space: 17134365052
effective search space used: 17134365052
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 67 (31.1 bits)
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