GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002115-TA|BGIBMGA002115-PA|IPR008853|TMEM9
         (222 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      27   0.16 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   4.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   5.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.9  

>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 151 ICLDPLINKRAMASYQEHTNEDDDNPIPGTSQTMGATPR 189
           +CLDP +N +   S    T+E    P+    Q  G  P+
Sbjct: 20  MCLDPRLNSKIQVSGASTTDECQVTPVIHVLQYPGCVPK 58


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)

Query: 181 SQTMGATPRGNVLNRVTHQQ 200
           S+ M   PRG+V  R TH Q
Sbjct: 459 SRGMDFQPRGSVFVRFTHLQ 478


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 181 SQTMGATPRGNVLNRVTHQQDK 202
           S+ +   PRG+V  R TH Q++
Sbjct: 459 SRGLDFQPRGSVFVRFTHLQNQ 480


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 186 ATPRGNVLNRVTHQQDKWKRQVREQRRNI 214
           A P  +  NR +  Q  W  +  EQ +N+
Sbjct: 349 AAPGNSASNRHSAWQSHWLNKGAEQAKNV 377


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.139    0.444 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,760
Number of Sequences: 317
Number of extensions: 2463
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 222
length of database: 114,650
effective HSP length: 54
effective length of query: 168
effective length of database: 97,532
effective search space: 16385376
effective search space used: 16385376
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 42 (21.0 bits)