GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002115-TA|BGIBMGA002115-PA|IPR008853|TMEM9
         (222 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   1.8  
L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase pro...    25   2.4  
AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase p...    25   2.4  
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    24   3.1  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     23   5.5  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    23   7.2  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)

Query: 169 TNEDDDNPIPGTSQTMGATPRGN 191
           TN DD+ P  G++    AT R N
Sbjct: 807 TNSDDEQPPAGSATAKAATQRDN 829


>L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 11/20 (55%), Positives = 12/20 (60%)

Query: 181 SQTMGATPRGNVLNRVTHQQ 200
           S+ M   PRGNV  R TH Q
Sbjct: 460 SRGMDFVPRGNVFARFTHLQ 479


>AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 11/20 (55%), Positives = 12/20 (60%)

Query: 181 SQTMGATPRGNVLNRVTHQQ 200
           S+ M   PRGNV  R TH Q
Sbjct: 460 SRGMDFVPRGNVFARFTHLQ 479


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 141 MLLVGYMGFLICLDPLINKRAMASYQEHTNEDDDNPI 177
           ML+   + F IC  P   +R +  Y  +TN    +P+
Sbjct: 269 MLVAVVVAFFICWAPFHAQRLVYIYGVNTNHQPSDPL 305


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 23  DKPAFFSIHSLKPIYTLPMDDKDVIYP 49
           D  A ++ H+  P Y L  D K + YP
Sbjct: 153 DSAADYAYHAQYPPYALATDIKPMYYP 179


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 7/27 (25%), Positives = 18/27 (66%)

Query: 148 GFLICLDPLINKRAMASYQEHTNEDDD 174
           G L+C  P+++ R + +Y++ ++ + D
Sbjct: 367 GRLVCWFPMLSSRRLLTYEKVSDSEAD 393


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.139    0.444 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,544
Number of Sequences: 2123
Number of extensions: 9937
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 6
length of query: 222
length of database: 516,269
effective HSP length: 62
effective length of query: 160
effective length of database: 384,643
effective search space: 61542880
effective search space used: 61542880
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 46 (22.6 bits)