Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002115-TA|BGIBMGA002115-PA|IPR008853|TMEM9
(222 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23510-7|AAC46785.1| 261|Caenorhabditis elegans Hypothetical pr... 111 5e-25
U23510-8|ABC71804.1| 128|Caenorhabditis elegans Hypothetical pr... 91 4e-19
Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z82282-8|CAB05278.1| 575|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z81547-1|CAB04459.1| 354|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z79753-4|CAB02084.2| 396|Caenorhabditis elegans Hypothetical pr... 27 8.1
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 27 8.1
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 27 8.1
>U23510-7|AAC46785.1| 261|Caenorhabditis elegans Hypothetical
protein R12C12.6a protein.
Length = 261
Score = 111 bits (266), Expect = 5e-25
Identities = 68/196 (34%), Positives = 100/196 (51%), Gaps = 24/196 (12%)
Query: 51 GYKGTFENKRCKCVCPSPAAVF----NNTADTG--RSPFID--NVPPNKCNCEGLVLPRI 102
G + FE+ RC+C+CPS N T T R F N+ P+ C +V ++
Sbjct: 66 GTEANFEDTRCRCICPSLLKFLDLAENTTEKTEGLRRRFYTKTNIEPSHCKPSNIVKDQV 125
Query: 103 GDQLKDRAQE-FCPRCQCKYENRNXXXXXXXXXXXXXXXMLLVGYMGFLICLDPLINKRA 161
+ + + + F C C+YE+RN +L GYM FL+CLDP++ K+
Sbjct: 126 SNFVDETHMDAFLANCDCRYESRNTVLLKVVVIFVICVIAVLTGYMVFLMCLDPMLRKKR 185
Query: 162 MA-SYQEHTNEDDDN---PIPGTSQ----------TMGAT-PRGNVLNRVTHQQDKWKRQ 206
++ SYQ+H +E +DN P T T G T R NVL RV +Q++W ++
Sbjct: 186 LSISYQQHNDEMEDNIFAAAPSTDDESSSASNSMDTQGTTRARSNVLGRVEAEQNRWMKK 245
Query: 207 VREQRRNIYDRHTMLN 222
V EQRRNI++ HTMLN
Sbjct: 246 VEEQRRNIFEDHTMLN 261
>U23510-8|ABC71804.1| 128|Caenorhabditis elegans Hypothetical
protein R12C12.6b protein.
Length = 128
Score = 91.5 bits (217), Expect = 4e-19
Identities = 50/125 (40%), Positives = 69/125 (55%), Gaps = 15/125 (12%)
Query: 113 FCPRCQCKYENRNXXXXXXXXXXXXXXXMLLVGYMGFLICLDPLINKRAMA-SYQEHTNE 171
F C C+YE+RN +L GYM FL+CLDP++ K+ ++ SYQ+H +E
Sbjct: 4 FLANCDCRYESRNTVLLKVVVIFVICVIAVLTGYMVFLMCLDPMLRKKRLSISYQQHNDE 63
Query: 172 DDDN---PIPGTSQ----------TMGAT-PRGNVLNRVTHQQDKWKRQVREQRRNIYDR 217
+DN P T T G T R NVL RV +Q++W ++V EQRRNI++
Sbjct: 64 MEDNIFAAAPSTDDESSSASNSMDTQGTTRARSNVLGRVEAEQNRWMKKVEEQRRNIFED 123
Query: 218 HTMLN 222
HTMLN
Sbjct: 124 HTMLN 128
>Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical
protein ZK524.4 protein.
Length = 1016
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
Query: 156 LINKRAMASYQEHTNED--------DDNPIPGTSQTMGATPRGNVLNRVTHQQDKWK 204
L+ +R +ASY+E + DD P P S GAT R N+ +R + + W+
Sbjct: 339 LLAERVLASYREEQARELLAKHVEWDDRPDP-ISDNSGATTRSNINSRCRSRSNSWR 394
>Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical
protein ZK524.4 protein.
Length = 1016
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
Query: 156 LINKRAMASYQEHTNED--------DDNPIPGTSQTMGATPRGNVLNRVTHQQDKWK 204
L+ +R +ASY+E + DD P P S GAT R N+ +R + + W+
Sbjct: 339 LLAERVLASYREEQARELLAKHVEWDDRPDP-ISDNSGATTRSNINSRCRSRSNSWR 394
>Z82282-8|CAB05278.1| 575|Caenorhabditis elegans Hypothetical
protein T07G12.11 protein.
Length = 575
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 170 NEDDDNPIPGTSQTMGATPRGNVLNRVTHQQDK 202
+E+D++PIP T + A P LN+ Q +K
Sbjct: 404 DEEDESPIPSTKKVSFAVPVVQRLNKRNEQMNK 436
>Z81547-1|CAB04459.1| 354|Caenorhabditis elegans Hypothetical
protein F53F8.1 protein.
Length = 354
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 4 KKLFLLIFICEHAQDRSVADKPAFFSIHSLKPIYTLPMDDKDVIYPFGYKGTFENKR 60
KK L +C H DRS P F+S+ S ++ P + I P G + +
Sbjct: 19 KKSLLKFSVCYHRSDRSGVTTPLFWSLGS--SLFCRPEEMYSSIVPSSSNGYYHQSQ 73
>Z79753-4|CAB02084.2| 396|Caenorhabditis elegans Hypothetical
protein F20G2.4 protein.
Length = 396
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 161 AMASYQEHTNEDDDNPIPGTSQTMGATPR 189
++ Y EHT D DN + TS A PR
Sbjct: 142 SLGRYHEHTRPDRDNSLKVTSTDYEARPR 170
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 154 DPLINKRAMASYQEHTNEDDDNPIPGTSQTMGATPRG 190
DP++ K + EH N+++ + P +T+ T RG
Sbjct: 387 DPVVGKFCVIKKSEHENKENAHLPPREDRTLDVTTRG 423
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 154 DPLINKRAMASYQEHTNEDDDNPIPGTSQTMGATPRG 190
DP++ K + EH N+++ + P +T+ T RG
Sbjct: 387 DPVVGKFCVIKKSEHENKENAHLPPREDRTLDVTTRG 423
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.323 0.139 0.444
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,923,346
Number of Sequences: 27539
Number of extensions: 253264
Number of successful extensions: 534
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 519
Number of HSP's gapped (non-prelim): 11
length of query: 222
length of database: 12,573,161
effective HSP length: 79
effective length of query: 143
effective length of database: 10,397,580
effective search space: 1486853940
effective search space used: 1486853940
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 58 (27.5 bits)
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