GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002115-TA|BGIBMGA002115-PA|IPR008853|TMEM9
         (222 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   3.0  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    23   3.0  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    23   3.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   7.0  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   9.2  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   9.2  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   9.2  
AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        21   9.2  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/18 (55%), Positives = 12/18 (66%)

Query: 181 SQTMGATPRGNVLNRVTH 198
           S+ +  TPRG VL R TH
Sbjct: 460 SRGLDFTPRGAVLARFTH 477


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/23 (39%), Positives = 15/23 (65%)

Query: 95  EGLVLPRIGDQLKDRAQEFCPRC 117
           E ++L  + DQL++RAQ    +C
Sbjct: 92  EDIMLGLLPDQLQERAQSVMGKC 114


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/23 (39%), Positives = 15/23 (65%)

Query: 95  EGLVLPRIGDQLKDRAQEFCPRC 117
           E ++L  + DQL++RAQ    +C
Sbjct: 92  EDIMLGLLPDQLQERAQSVMGKC 114


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)

Query: 202 KWKRQVREQRRNIY 215
           KW  Q  E RR+IY
Sbjct: 369 KWSSQKSEPRRSIY 382


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 141 MLLVGYMGFLICLDPLINKRAMASYQEHTNED 172
           ML    + F IC  P   +R +  Y++ T +D
Sbjct: 261 MLSAVVITFFICWAPFHVQRLLYVYEDSTYDD 292


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 14  EHAQDRSVADKPAFFSIHSLKPIYTLPMDDKDVIYPFGYKGTFEN 58
           +  ++R  ++  +  S+HS  PI  +   +K V      +G +EN
Sbjct: 185 QRTKERDQSEVESTSSLHSDMPIERILEAEKRVECKMEQQGNYEN 229


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 14  EHAQDRSVADKPAFFSIHSLKPIYTLPMDDKDVIYPFGYKGTFEN 58
           +  ++R  ++  +  S+HS  PI  +   +K V      +G +EN
Sbjct: 185 QRTKERDQSEVESTSSLHSDMPIERILEAEKRVECKMEQQGNYEN 229


>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)

Query: 29 SIHSLKPIYTLPMD 42
          S H ++P Y LP D
Sbjct: 35 SFHEMRPDYLLPKD 48


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.139    0.444 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,019
Number of Sequences: 429
Number of extensions: 3301
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 222
length of database: 140,377
effective HSP length: 55
effective length of query: 167
effective length of database: 116,782
effective search space: 19502594
effective search space used: 19502594
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 42 (21.0 bits)