SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002113-TA|BGIBMGA002113-PA|IPR009060|UBA-like
         (435 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF053356-3|AAC78792.1|  817|Homo sapiens ORF2 protein.                 33   1.5  
Z47038-1|CAA87104.1|  286|Homo sapiens putative microtubule-asso...    32   4.6  
U38292-1|AAB41133.1| 2805|Homo sapiens microtubule-associated pr...    31   6.0  
U38291-1|AAB41132.1| 2805|Homo sapiens microtubule-associated pr...    31   6.0  
BC064601-1|AAH64601.1|  583|Homo sapiens PLEKHA4 protein protein.      31   6.0  
BC062749-1|AAH62749.1|  383|Homo sapiens CCDC73 protein protein.       31   6.0  
BC033832-1|AAH33832.1|  446|Homo sapiens PLEKHA4 protein protein.      31   6.0  
BC024157-1|AAH24157.1|  779|Homo sapiens pleckstrin homology dom...    31   6.0  
AY007233-1|AAG01896.1|  779|Homo sapiens phosphoinositol 3-phosp...    31   6.0  
BC094702-1|AAH94702.1|  627|Homo sapiens MAP1A protein protein.        31   8.0  
AF200415-1|AAF08305.2| 1825|Homo sapiens proliferation-related p...    31   8.0  

>AF053356-3|AAC78792.1|  817|Homo sapiens ORF2 protein.
          Length = 817

 Score = 33.5 bits (73), Expect = 1.5
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 350 NGPNP-TLRRGPRESLLLEDYMPWNGPNPEYRAGNAVRVEGPEYRDVTQQTLARGPSGTA 408
           + P+P  +++GP+E +  E  + + G   E      +  EGPE  D+    L+ G  G++
Sbjct: 229 SAPHPGPMQKGPKEPIPEEQELDFQGLEEEEEPSEGLEEEGPEADDIRGIQLSPG-VGSS 287

Query: 409 NGPAG 413
            GP G
Sbjct: 288 AGPPG 292


>Z47038-1|CAA87104.1|  286|Homo sapiens putative
           microtubule-associated protein 1A protein.
          Length = 286

 Score = 31.9 bits (69), Expect = 4.6
 Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 3/112 (2%)

Query: 326 KLKPILKTNNGAETKYKSPYCSQANGPNPTLRRGPRESLLLEDYMPWNGPNPEYRAG--N 383
           K K  +   NG E +   PY +   G    L   P E +      P N P  +   G   
Sbjct: 91  KAKTGIVLPNGKEAEISVPYLTSITGLVVWLPANPTEKIA-RVLFPGNAPQNKILEGLEK 149

Query: 384 AVRVEGPEYRDVTQQTLARGPSGTANGPAGLARGSMYQKSNKKTTKMYVSRV 435
              ++   Y   TQ+ LA G   T   P  + +    ++S K TTK  VS++
Sbjct: 150 LRHLDFLRYPVATQKDLASGAVPTNLKPGKIKQRXDSKESLKATTKTAVSKL 201


>U38292-1|AAB41133.1| 2805|Homo sapiens microtubule-associated
           protein 1a protein.
          Length = 2805

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 3/112 (2%)

Query: 326 KLKPILKTNNGAETKYKSPYCSQANGPNPTLRRGPRESLLLEDYMPWNGPNPEYRAG--N 383
           K K  +   NG E +   PY +        L   P E ++     P N P  +   G   
Sbjct: 224 KAKTGIVLPNGKEAEISVPYLTSITALVVWLPANPTEKIV-RVLFPGNAPQNKILEGLEK 282

Query: 384 AVRVEGPEYRDVTQQTLARGPSGTANGPAGLARGSMYQKSNKKTTKMYVSRV 435
              ++   Y   TQ+ LA G   T   P+ + + +  ++S K TTK  VS++
Sbjct: 283 LRHLDFLRYPVATQKDLASGAVPTNLKPSKIKQRADSKESLKATTKTXVSKL 334


>U38291-1|AAB41132.1| 2805|Homo sapiens microtubule-associated
           protein 1a protein.
          Length = 2805

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 3/112 (2%)

Query: 326 KLKPILKTNNGAETKYKSPYCSQANGPNPTLRRGPRESLLLEDYMPWNGPNPEYRAG--N 383
           K K  +   NG E +   PY +        L   P E ++     P N P  +   G   
Sbjct: 224 KAKTGIVLPNGKEAEISVPYLTSITALVVWLPANPTEKIV-RVLFPGNAPQNKILEGLEK 282

Query: 384 AVRVEGPEYRDVTQQTLARGPSGTANGPAGLARGSMYQKSNKKTTKMYVSRV 435
              ++   Y   TQ+ LA G   T   P+ + + +  ++S K TTK  VS++
Sbjct: 283 LRHLDFLRYPVATQKDLASGAVPTNLKPSKIKQRADSKESLKATTKTXVSKL 334


>BC064601-1|AAH64601.1|  583|Homo sapiens PLEKHA4 protein protein.
          Length = 583

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 35/154 (22%), Positives = 56/154 (36%), Gaps = 1/154 (0%)

Query: 95  IMKTNEEKQLLKRQFELKYPWIPERSVPAGGPTTAERNQRLQRDAVRQGHIRLAPRLESL 154
           I +  EEK+ L+   EL    + + +  AG P  A   QRL +D +      L   L   
Sbjct: 360 IDQKQEEKEQLEAALELTRQQLGQATREAGAPGRAWGRQRLLQDRLVSVRATLC-HLTQE 418

Query: 155 YADDWDAAGYLKSVFPKADETIIIDVLANKDNNVQKASEELIGLGYVKKDISAQQKKKDI 214
               WD    L+       ET+   +      +   A ++L  +      +   QK    
Sbjct: 419 RERVWDTYSGLEQELGTLRETLEYLLHLGSPQDRVSAQQQLWMVEDTLAGLGGPQKPPPH 478

Query: 215 PTPQPIKKVVIMKTNEEKQLLKRQFELKYPWIPE 248
             P     V+  + + E++ L    EL  P  PE
Sbjct: 479 TEPDSPSPVLQGEESSERESLPESLELSSPRSPE 512


>BC062749-1|AAH62749.1|  383|Homo sapiens CCDC73 protein protein.
          Length = 383

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 2/96 (2%)

Query: 49  DVLANKDNNVQKASEELIGLGYVKKDISAQQKK--KDIPTPQPIKKVVIMKTNEEKQLLK 106
           D++ +K     K  EE I L   ++     Q++   ++   + I + +     E++QLL+
Sbjct: 137 DLIKSKVTCQYKMGEENINLTIKEQKFQELQERLNMELELNEKINEEITHIQEEKQQLLR 196

Query: 107 RQFELKYPWIPERSVPAGGPTTAERNQRLQRDAVRQ 142
           +Q +       E  V      T ER+  LQR+ V++
Sbjct: 197 QQIQANTEMEAELKVLKENNQTLERDNELQREKVKE 232


>BC033832-1|AAH33832.1|  446|Homo sapiens PLEKHA4 protein protein.
          Length = 446

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 35/154 (22%), Positives = 56/154 (36%), Gaps = 1/154 (0%)

Query: 95  IMKTNEEKQLLKRQFELKYPWIPERSVPAGGPTTAERNQRLQRDAVRQGHIRLAPRLESL 154
           I +  EEK+ L+   EL    + + +  AG P  A   QRL +D +      L   L   
Sbjct: 52  IDQKQEEKEQLEAALELTRQQLGQATREAGAPGRAWGRQRLLQDRLVSVRATLC-HLTQE 110

Query: 155 YADDWDAAGYLKSVFPKADETIIIDVLANKDNNVQKASEELIGLGYVKKDISAQQKKKDI 214
               WD    L+       ET+   +      +   A ++L  +      +   QK    
Sbjct: 111 RERVWDTYSGLEQELGTLRETLEYLLHLGSPQDRVSAQQQLWMVEDTLAGLGGPQKPPPH 170

Query: 215 PTPQPIKKVVIMKTNEEKQLLKRQFELKYPWIPE 248
             P     V+  + + E++ L    EL  P  PE
Sbjct: 171 TEPDSPSPVLQGEESSERESLPESLELSSPRSPE 204


>BC024157-1|AAH24157.1|  779|Homo sapiens pleckstrin homology domain
           containing, family A (phosphoinositide binding speci
           protein.
          Length = 779

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 35/154 (22%), Positives = 56/154 (36%), Gaps = 1/154 (0%)

Query: 95  IMKTNEEKQLLKRQFELKYPWIPERSVPAGGPTTAERNQRLQRDAVRQGHIRLAPRLESL 154
           I +  EEK+ L+   EL    + + +  AG P  A   QRL +D +      L   L   
Sbjct: 385 IDQKQEEKEQLEAALELTRQQLGQATREAGAPGRAWGRQRLLQDRLVSVRATLC-HLTQE 443

Query: 155 YADDWDAAGYLKSVFPKADETIIIDVLANKDNNVQKASEELIGLGYVKKDISAQQKKKDI 214
               WD    L+       ET+   +      +   A ++L  +      +   QK    
Sbjct: 444 RERVWDTYSGLEQELGTLRETLEYLLHLGSPQDRVSAQQQLWMVEDTLAGLGGPQKPPPH 503

Query: 215 PTPQPIKKVVIMKTNEEKQLLKRQFELKYPWIPE 248
             P     V+  + + E++ L    EL  P  PE
Sbjct: 504 TEPDSPSPVLQGEESSERESLPESLELSSPRSPE 537


>AY007233-1|AAG01896.1|  779|Homo sapiens phosphoinositol
           3-phosphate binding protein-1 protein.
          Length = 779

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 35/154 (22%), Positives = 56/154 (36%), Gaps = 1/154 (0%)

Query: 95  IMKTNEEKQLLKRQFELKYPWIPERSVPAGGPTTAERNQRLQRDAVRQGHIRLAPRLESL 154
           I +  EEK+ L+   EL    + + +  AG P  A   QRL +D +      L   L   
Sbjct: 385 IDQKQEEKEQLEAALELTRQQLGQATREAGAPGRAWGRQRLLQDRLVSVRATLC-HLTQE 443

Query: 155 YADDWDAAGYLKSVFPKADETIIIDVLANKDNNVQKASEELIGLGYVKKDISAQQKKKDI 214
               WD    L+       ET+   +      +   A ++L  +      +   QK    
Sbjct: 444 RERVWDTYSGLEQELGTLRETLEYLLHLGSPQDRVSAQQQLWMVEDTLAGLGGPQKPPPH 503

Query: 215 PTPQPIKKVVIMKTNEEKQLLKRQFELKYPWIPE 248
             P     V+  + + E++ L    EL  P  PE
Sbjct: 504 TEPDSPSPVLQGEESSERESLPESLELSSPRSPE 537


>BC094702-1|AAH94702.1|  627|Homo sapiens MAP1A protein protein.
          Length = 627

 Score = 31.1 bits (67), Expect = 8.0
 Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 3/112 (2%)

Query: 326 KLKPILKTNNGAETKYKSPYCSQANGPNPTLRRGPRESLLLEDYMPWNGPNPEYRAG--N 383
           K K  +   NG E +   PY +        L   P E ++     P N P  +   G   
Sbjct: 224 KAKTGIVLPNGKEAEISVPYLTSITALVVWLPANPTEKIV-RVLFPGNAPQNKILEGLEK 282

Query: 384 AVRVEGPEYRDVTQQTLARGPSGTANGPAGLARGSMYQKSNKKTTKMYVSRV 435
              ++   Y   TQ+ LA G   T   P+ + + +  ++S K TTK  VS++
Sbjct: 283 LRHLDFLRYPVATQKDLASGAVPTNLKPSKIKQRADSKESLKATTKTAVSKL 334


>AF200415-1|AAF08305.2| 1825|Homo sapiens proliferation-related
           protein P80 protein.
          Length = 1825

 Score = 31.1 bits (67), Expect = 8.0
 Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 3/112 (2%)

Query: 326 KLKPILKTNNGAETKYKSPYCSQANGPNPTLRRGPRESLLLEDYMPWNGPNPEYRAG--N 383
           K K  +   NG E +   PY +        L   P E ++     P N P  +   G   
Sbjct: 224 KAKTGIVLPNGKEAEISVPYLTSITALVVWLPANPTEKIV-RVLFPGNAPQNKILEGLEK 282

Query: 384 AVRVEGPEYRDVTQQTLARGPSGTANGPAGLARGSMYQKSNKKTTKMYVSRV 435
              ++   Y   TQ+ LA G   T   P+ + + +  ++S K TTK  VS++
Sbjct: 283 LRHLDFLRYPVATQKDLASGAVPTNLKPSKIKQRADSKESLKATTKTAVSKL 334


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.313    0.131    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,209,551
Number of Sequences: 224733
Number of extensions: 3042376
Number of successful extensions: 6036
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 6035
Number of HSP's gapped (non-prelim): 11
length of query: 435
length of database: 73,234,838
effective HSP length: 92
effective length of query: 343
effective length of database: 52,559,402
effective search space: 18027874886
effective search space used: 18027874886
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 67 (31.1 bits)

- SilkBase 1999-2023 -