Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002113-TA|BGIBMGA002113-PA|IPR009060|UBA-like
(435 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-3493|AAF51689.3| 532|Drosophila melanogaster CG10508-P... 125 1e-28
AY060473-1|AAL25512.1| 270|Drosophila melanogaster SD06609p pro... 123 6e-28
AE014296-3495|AAO41283.1| 270|Drosophila melanogaster CG10508-P... 122 7e-28
AE014296-3492|AAN12160.2| 690|Drosophila melanogaster CG10508-P... 96 7e-20
AE014296-3494|AAO41284.2| 437|Drosophila melanogaster CG10508-P... 93 5e-19
AE013599-1923|AAF58230.1| 3257|Drosophila melanogaster CG12864-P... 33 1.0
AE014298-683|AAN09131.1| 642|Drosophila melanogaster CG2861-PB,... 31 3.1
AE014298-682|AAF45987.2| 1893|Drosophila melanogaster CG2861-PA,... 31 3.1
BT023498-1|AAY84898.1| 1190|Drosophila melanogaster LD32453p pro... 30 7.2
AY121649-1|AAM51976.1| 950|Drosophila melanogaster LD23647p pro... 30 7.2
AY069344-1|AAL39489.2| 985|Drosophila melanogaster LD05471p pro... 30 7.2
AM294459-1|CAL26402.1| 281|Drosophila melanogaster CG12909 prot... 30 7.2
AF179287-1|AAD52673.1| 1179|Drosophila melanogaster SMC2 protein. 30 7.2
AE014134-2238|AAF53220.2| 950|Drosophila melanogaster CG5787-PA... 30 7.2
AE013599-1965|AAF58197.1| 1179|Drosophila melanogaster CG10212-P... 30 7.2
BT010261-1|AAQ23579.1| 276|Drosophila melanogaster RE27803p pro... 29 9.5
AF538714-1|AAN15143.1| 1255|Drosophila melanogaster histone deac... 29 9.5
AE014298-1873|AAN09318.1| 1181|Drosophila melanogaster CG1770-PB... 29 9.5
AE014298-1872|AAF48245.2| 1248|Drosophila melanogaster CG1770-PA... 29 9.5
AE013599-455|AAF59226.1| 276|Drosophila melanogaster CG1360-PA ... 29 9.5
>AE014296-3493|AAF51689.3| 532|Drosophila melanogaster CG10508-PD,
isoform D protein.
Length = 532
Score = 125 bits (302), Expect = 1e-28
Identities = 96/285 (33%), Positives = 145/285 (50%), Gaps = 35/285 (12%)
Query: 164 YLKSVFPKADETIIIDVLANKDNNVQKASEELIGLGYVKKDISAQQKKKDIPT------- 216
Y+K++FPKADE +++D+LAN DNNVQ ASE+LI LGY K+D+ + + P
Sbjct: 262 YMKNIFPKADEELLLDILANADNNVQFASEKLISLGYTKRDMQQPHRPNNRPPDLNQDQE 321
Query: 217 ---PQPIKKVVIMK---TNEEKQLLKRQFELKYPWIPERLIIIALESVDFNEDRAHHILS 270
Q + + T EEK ++ + KYP I ER+I++ALESV++ EDRA IL
Sbjct: 322 AGGDQSGVHIPLRPKEYTEEEKTKMQTLLKEKYPQIAERIILMALESVNYAEDRATQILQ 381
Query: 271 TVSKE-EATHQARAPEVQMPRRFVPDTRRDSSVVFDYEPSQPAPVQASRRLKIWTEKLKP 329
V E E Q +AP P+ D ++ + E A + R
Sbjct: 382 IVQDEDEQREQKQAP--MNPKHL--DLKKTTGT----EQIDGANEKDRHR-------QHS 426
Query: 330 ILKTNNGAETKYKSPYCSQAN-GPNPTLRRGPRESLLLEDYMPWNGPNPEYRAGNAVRVE 388
+ ++N +++S A+ GPN L +G E+LLL DY+ WNGPN + +
Sbjct: 427 LGNSHNSESAEFQSIIERMASLGPNSQLSKGADENLLLADYVTWNGPNTKLLQKQI--TQ 484
Query: 389 GPEYRDVTQQTL--ARGPSGTANGP-AGLARGSMYQKSNKKTTKM 430
GP +T +T G S GP +GLA+GS+Y + + K+ +
Sbjct: 485 GPNASLLTDRTYKPRGGKSELCKGPQSGLAKGSIYAQGSNKSANI 529
Score = 75.8 bits (178), Expect = 1e-13
Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 4 AKGISGSLHGSSHYTPMTGTPQASIWFNVRYLKSVFPKADETIIIDVLANKDNNVQKASE 63
+ + +LHGS + + P +S +RY+K++FPKADE +++D+LAN DNNVQ ASE
Sbjct: 233 SSAVPPALHGSPLWRS-SPRPHSSPKMKLRYMKNIFPKADEELLLDILANADNNVQFASE 291
Query: 64 ELIGLGYVKKDISAQQKKKDIP 85
+LI LGY K+D+ + + P
Sbjct: 292 KLISLGYTKRDMQQPHRPNNRP 313
>AY060473-1|AAL25512.1| 270|Drosophila melanogaster SD06609p
protein.
Length = 270
Score = 123 bits (296), Expect = 6e-28
Identities = 95/284 (33%), Positives = 144/284 (50%), Gaps = 35/284 (12%)
Query: 165 LKSVFPKADETIIIDVLANKDNNVQKASEELIGLGYVKKDISAQQKKKDIPT-------- 216
+K++FPKADE +++D+LAN DNNVQ ASE+LI LGY K+D+ + + P
Sbjct: 1 MKNIFPKADEELLLDILANADNNVQFASEKLISLGYTKRDMQQPHRPNNRPPDLNQDQEA 60
Query: 217 --PQPIKKVVIMK---TNEEKQLLKRQFELKYPWIPERLIIIALESVDFNEDRAHHILST 271
Q + + T EEK ++ + KYP I ER+I++ALESV++ EDRA IL
Sbjct: 61 GGDQSGVHIPLRPKEYTEEEKTKMQTLLKEKYPQIAERIILMALESVNYAEDRATQILQI 120
Query: 272 VSKE-EATHQARAPEVQMPRRFVPDTRRDSSVVFDYEPSQPAPVQASRRLKIWTEKLKPI 330
V E E Q +AP P+ D ++ + E A + R +
Sbjct: 121 VQDEDEQREQKQAP--MNPKHL--DLKKTTGT----EQIDGANEKDRHR-------QHSL 165
Query: 331 LKTNNGAETKYKSPYCSQAN-GPNPTLRRGPRESLLLEDYMPWNGPNPEYRAGNAVRVEG 389
++N +++S A+ GPN L +G E+LLL DY+ WNGPN + +G
Sbjct: 166 GNSHNSESAEFQSIIERMASLGPNSQLSKGADENLLLADYVTWNGPNTKLLQKQV--TQG 223
Query: 390 PEYRDVTQQTL--ARGPSGTANGP-AGLARGSMYQKSNKKTTKM 430
P +T +T G S GP +GLA+GS+Y + + K+ +
Sbjct: 224 PNASLLTDRTYKPRGGKSELCKGPQSGLAKGSIYAQGSNKSANI 267
Score = 65.3 bits (152), Expect = 2e-10
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 35 LKSVFPKADETIIIDVLANKDNNVQKASEELIGLGYVKKDISAQQKKKDIP 85
+K++FPKADE +++D+LAN DNNVQ ASE+LI LGY K+D+ + + P
Sbjct: 1 MKNIFPKADEELLLDILANADNNVQFASEKLISLGYTKRDMQQPHRPNNRP 51
>AE014296-3495|AAO41283.1| 270|Drosophila melanogaster CG10508-PE,
isoform E protein.
Length = 270
Score = 122 bits (295), Expect = 7e-28
Identities = 95/284 (33%), Positives = 144/284 (50%), Gaps = 35/284 (12%)
Query: 165 LKSVFPKADETIIIDVLANKDNNVQKASEELIGLGYVKKDISAQQKKKDIPT-------- 216
+K++FPKADE +++D+LAN DNNVQ ASE+LI LGY K+D+ + + P
Sbjct: 1 MKNIFPKADEELLLDILANADNNVQFASEKLISLGYTKRDMQQPHRPNNRPPDLNQDQEA 60
Query: 217 --PQPIKKVVIMK---TNEEKQLLKRQFELKYPWIPERLIIIALESVDFNEDRAHHILST 271
Q + + T EEK ++ + KYP I ER+I++ALESV++ EDRA IL
Sbjct: 61 GGDQSGVHIPLRPKEYTEEEKTKMQTLLKEKYPQIAERIILMALESVNYAEDRATQILQI 120
Query: 272 VSKE-EATHQARAPEVQMPRRFVPDTRRDSSVVFDYEPSQPAPVQASRRLKIWTEKLKPI 330
V E E Q +AP P+ D ++ + E A + R +
Sbjct: 121 VQDEDEQREQKQAP--MNPKHL--DLKKTTGT----EQIDGANEKDRHR-------QHSL 165
Query: 331 LKTNNGAETKYKSPYCSQAN-GPNPTLRRGPRESLLLEDYMPWNGPNPEYRAGNAVRVEG 389
++N +++S A+ GPN L +G E+LLL DY+ WNGPN + +G
Sbjct: 166 GNSHNSESAEFQSIIERMASLGPNSQLSKGADENLLLADYVTWNGPNTKLLQKQI--TQG 223
Query: 390 PEYRDVTQQTL--ARGPSGTANGP-AGLARGSMYQKSNKKTTKM 430
P +T +T G S GP +GLA+GS+Y + + K+ +
Sbjct: 224 PNASLLTDRTYKPRGGKSELCKGPQSGLAKGSIYAQGSNKSANI 267
Score = 65.3 bits (152), Expect = 2e-10
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 35 LKSVFPKADETIIIDVLANKDNNVQKASEELIGLGYVKKDISAQQKKKDIP 85
+K++FPKADE +++D+LAN DNNVQ ASE+LI LGY K+D+ + + P
Sbjct: 1 MKNIFPKADEELLLDILANADNNVQFASEKLISLGYTKRDMQQPHRPNNRP 51
>AE014296-3492|AAN12160.2| 690|Drosophila melanogaster CG10508-PF,
isoform F protein.
Length = 690
Score = 96.3 bits (229), Expect = 7e-20
Identities = 57/135 (42%), Positives = 80/135 (59%), Gaps = 14/135 (10%)
Query: 164 YLKSVFPKADETIIIDVLANKDNNVQKASEELIGLGYVKKDISAQQKKKDIPT------- 216
Y+K++FPKADE +++D+LAN DNNVQ ASE+LI LGY K+D+ + + P
Sbjct: 296 YMKNIFPKADEELLLDILANADNNVQFASEKLISLGYTKRDMQQPHRPNNRPPDLNQDQE 355
Query: 217 ---PQPIKKVVIMK---TNEEKQLLKRQFELKYPWIPERLIIIALESVDFNEDRAHHILS 270
Q + + T EEK ++ + KYP I ER+I++ALESV++ EDRA IL
Sbjct: 356 AGGDQSGVHIPLRPKEYTEEEKTKMQTLLKEKYPQIAERIILMALESVNYAEDRATQILQ 415
Query: 271 TVSKE-EATHQARAP 284
V E E Q +AP
Sbjct: 416 IVQDEDEQREQKQAP 430
Score = 75.8 bits (178), Expect = 1e-13
Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 4 AKGISGSLHGSSHYTPMTGTPQASIWFNVRYLKSVFPKADETIIIDVLANKDNNVQKASE 63
+ + +LHGS + + P +S +RY+K++FPKADE +++D+LAN DNNVQ ASE
Sbjct: 267 SSAVPPALHGSPLWRS-SPRPHSSPKMKLRYMKNIFPKADEELLLDILANADNNVQFASE 325
Query: 64 ELIGLGYVKKDISAQQKKKDIP 85
+LI LGY K+D+ + + P
Sbjct: 326 KLISLGYTKRDMQQPHRPNNRP 347
Score = 39.5 bits (88), Expect = 0.009
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Query: 333 TNNGAETKYKSPYCSQANGPNPTLRRGPRESLLLEDYMPWNGPNPEYRAGNAVRVEGPEY 392
T++ + +S S A P R + L DY+ WNGPN + +GP
Sbjct: 589 TSSSLVSSAQSNSSSIARRPAFESRARTKTDSLKADYVTWNGPNTKLLQKQI--TQGPNA 646
Query: 393 RDVTQQTL--ARGPSGTANGP-AGLARGSMYQKSNKKTTKM 430
+T +T G S GP +GLA+GS+Y + + K+ +
Sbjct: 647 SLLTDRTYKPRGGKSELCKGPQSGLAKGSIYAQGSNKSANI 687
>AE014296-3494|AAO41284.2| 437|Drosophila melanogaster CG10508-PC,
isoform C protein.
Length = 437
Score = 93.5 bits (222), Expect = 5e-19
Identities = 56/134 (41%), Positives = 79/134 (58%), Gaps = 14/134 (10%)
Query: 165 LKSVFPKADETIIIDVLANKDNNVQKASEELIGLGYVKKDISAQQKKKDIPT-------- 216
+K++FPKADE +++D+LAN DNNVQ ASE+LI LGY K+D+ + + P
Sbjct: 1 MKNIFPKADEELLLDILANADNNVQFASEKLISLGYTKRDMQQPHRPNNRPPDLNQDQEA 60
Query: 217 --PQPIKKVVIMK---TNEEKQLLKRQFELKYPWIPERLIIIALESVDFNEDRAHHILST 271
Q + + T EEK ++ + KYP I ER+I++ALESV++ EDRA IL
Sbjct: 61 GGDQSGVHIPLRPKEYTEEEKTKMQTLLKEKYPQIAERIILMALESVNYAEDRATQILQI 120
Query: 272 VSKE-EATHQARAP 284
V E E Q +AP
Sbjct: 121 VQDEDEQREQKQAP 134
Score = 65.3 bits (152), Expect = 2e-10
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 35 LKSVFPKADETIIIDVLANKDNNVQKASEELIGLGYVKKDISAQQKKKDIP 85
+K++FPKADE +++D+LAN DNNVQ ASE+LI LGY K+D+ + + P
Sbjct: 1 MKNIFPKADEELLLDILANADNNVQFASEKLISLGYTKRDMQQPHRPNNRP 51
Score = 54.8 bits (126), Expect = 2e-07
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 333 TNNGAETKYKSPYCSQAN-GPNPTLRRGPRESLLLEDYMPWNGPNPEYRAGNAVRVEGPE 391
++N +++S A+ GPN L +G E+LLL DY+ WNGPN + +GP
Sbjct: 335 SHNSESAEFQSIIERMASLGPNSQLSKGADENLLLADYVTWNGPNTKLLQKQI--TQGPN 392
Query: 392 YRDVTQQTL--ARGPSGTANGP-AGLARGSMYQKSNKKTTKM 430
+T +T G S GP +GLA+GS+Y + + K+ +
Sbjct: 393 ASLLTDRTYKPRGGKSELCKGPQSGLAKGSIYAQGSNKSANI 434
>AE013599-1923|AAF58230.1| 3257|Drosophila melanogaster CG12864-PA,
isoform A protein.
Length = 3257
Score = 32.7 bits (71), Expect = 1.0
Identities = 28/152 (18%), Positives = 59/152 (38%), Gaps = 3/152 (1%)
Query: 189 QKASEELIGLGYVKKDISAQQKKKDIPTPQPIKKVVIMKTNEEKQLLKRQFELKYPWIPE 248
Q ++ + G+ + K+ + + D P + K +M T + LL + P+
Sbjct: 1436 QNENQSIAGVNFEKQVPLPESVESDTPIMKIPTKTYLMCTKNKTSLLSASEDPDIVLEPQ 1495
Query: 249 RLIIIALESVDFNEDRAHHILSTVSKEEATHQARAPEVQMPRRFVPDTRRDSSVVFDYEP 308
+LI + + + D A+++ ++ +++ H+ +P + S +VF P
Sbjct: 1496 KLITTSKGDSNPDLDNANNLETSSTQDPKEHEFSDQTFTDNSDIIPSCTKKSQIVF---P 1552
Query: 309 SQPAPVQASRRLKIWTEKLKPILKTNNGAETK 340
+ P + T P K N E K
Sbjct: 1553 TTPTKSSDQTKNSFITPNRSPKSKRNVSKEAK 1584
>AE014298-683|AAN09131.1| 642|Drosophila melanogaster CG2861-PB,
isoform B protein.
Length = 642
Score = 31.1 bits (67), Expect = 3.1
Identities = 20/57 (35%), Positives = 24/57 (42%)
Query: 332 KTNNGAETKYKSPYCSQANGPNPTLRRGPRESLLLEDYMPWNGPNPEYRAGNAVRVE 388
KTNN S Q+NG PT+R+G E MPWN P RV+
Sbjct: 195 KTNNTNIPNKNSTGVIQSNGVAPTIRQGLVEPGGTNILMPWNRQIPMVSVAENPRVQ 251
>AE014298-682|AAF45987.2| 1893|Drosophila melanogaster CG2861-PA,
isoform A protein.
Length = 1893
Score = 31.1 bits (67), Expect = 3.1
Identities = 20/57 (35%), Positives = 24/57 (42%)
Query: 332 KTNNGAETKYKSPYCSQANGPNPTLRRGPRESLLLEDYMPWNGPNPEYRAGNAVRVE 388
KTNN S Q+NG PT+R+G E MPWN P RV+
Sbjct: 414 KTNNTNIPNKNSTGVIQSNGVAPTIRQGLVEPGGTNILMPWNRQIPMVSVAENPRVQ 470
>BT023498-1|AAY84898.1| 1190|Drosophila melanogaster LD32453p
protein.
Length = 1190
Score = 29.9 bits (64), Expect = 7.2
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 11/77 (14%)
Query: 209 QKKKDIPTPQPIKKVVIMKTNEEKQLL-------KRQ--FELKYPWIPERLIIIALESV- 258
+K+K + Q I+ V K NE+K++ KR E KYPWIPE +++
Sbjct: 904 KKEKMLKENQEIELEVKKKENEQKKISSDAKEAKKRMEALEAKYPWIPEEKNCFGMKNTR 963
Query: 259 -DFNEDRAHHILSTVSK 274
D++++ H + ++K
Sbjct: 964 YDYSKEDPHEAGNKLAK 980
>AY121649-1|AAM51976.1| 950|Drosophila melanogaster LD23647p
protein.
Length = 950
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/53 (30%), Positives = 21/53 (39%)
Query: 377 PEYRAGNAVRVEGPEYRDVTQQTLARGPSGTANGPAGLARGSMYQKSNKKTTK 429
P + G GP+ Q L GP G +GP GL G K+ + K
Sbjct: 557 PAVKTGPQANRTGPQGLRTGPQGLRAGPQGLRSGPQGLRTGQQGLKTGPQLQK 609
>AY069344-1|AAL39489.2| 985|Drosophila melanogaster LD05471p
protein.
Length = 985
Score = 29.9 bits (64), Expect = 7.2
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 11/77 (14%)
Query: 209 QKKKDIPTPQPIKKVVIMKTNEEKQLL-------KRQ--FELKYPWIPERLIIIALESV- 258
+K+K + Q I+ V K NE+K++ KR E KYPWIPE +++
Sbjct: 699 KKEKMLKENQEIELEVKKKENEQKKISSDAKEAKKRMEALEAKYPWIPEEKNCFGMKNTR 758
Query: 259 -DFNEDRAHHILSTVSK 274
D++++ H + ++K
Sbjct: 759 YDYSKEDPHEAGNKLAK 775
>AM294459-1|CAL26402.1| 281|Drosophila melanogaster CG12909
protein.
Length = 281
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 40 PKADETIIIDVLANKDNNVQKASEELIGLGYVKKDISAQQKKK-DIPTPQPIKKVVIMKT 98
P+ T + D+L + N +++A + + +K QQK+K ++ P KK+ ++T
Sbjct: 133 PRNQATQVWDILEKELNKMKEAKQAELARAKAEKIAEIQQKQKAEVEEEAPPKKMAKVET 192
Query: 99 NEE 101
E+
Sbjct: 193 TED 195
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 170 PKADETIIIDVLANKDNNVQKASEELIGLGYVKKDISAQQKKK-DIPTPQPIKKVVIMKT 228
P+ T + D+L + N +++A + + +K QQK+K ++ P KK+ ++T
Sbjct: 133 PRNQATQVWDILEKELNKMKEAKQAELARAKAEKIAEIQQKQKAEVEEEAPPKKMAKVET 192
Query: 229 NEE 231
E+
Sbjct: 193 TED 195
>AF179287-1|AAD52673.1| 1179|Drosophila melanogaster SMC2 protein.
Length = 1179
Score = 29.9 bits (64), Expect = 7.2
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 11/77 (14%)
Query: 209 QKKKDIPTPQPIKKVVIMKTNEEKQLL-------KRQ--FELKYPWIPERLIIIALESV- 258
+K+K + Q I+ V K NE+K++ KR E KYPWIPE +++
Sbjct: 893 KKEKMLKENQEIELEVKKKENEQKKISSDAKEAKKRMEALEAKYPWIPEEKNCFGMKNTR 952
Query: 259 -DFNEDRAHHILSTVSK 274
D++++ H + ++K
Sbjct: 953 YDYSKEDPHEAGNKLAK 969
>AE014134-2238|AAF53220.2| 950|Drosophila melanogaster CG5787-PA
protein.
Length = 950
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/53 (30%), Positives = 21/53 (39%)
Query: 377 PEYRAGNAVRVEGPEYRDVTQQTLARGPSGTANGPAGLARGSMYQKSNKKTTK 429
P + G GP+ Q L GP G +GP GL G K+ + K
Sbjct: 557 PAVKTGPQANRTGPQGLRTGPQGLRAGPQGLRSGPQGLRTGQQGLKTGPQLQK 609
>AE013599-1965|AAF58197.1| 1179|Drosophila melanogaster CG10212-PA
protein.
Length = 1179
Score = 29.9 bits (64), Expect = 7.2
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 11/77 (14%)
Query: 209 QKKKDIPTPQPIKKVVIMKTNEEKQLL-------KRQ--FELKYPWIPERLIIIALESV- 258
+K+K + Q I+ V K NE+K++ KR E KYPWIPE +++
Sbjct: 893 KKEKMLKENQEIELEVKKKENEQKKISSDAKEAKKRMEALEAKYPWIPEEKNCFGMKNTR 952
Query: 259 -DFNEDRAHHILSTVSK 274
D++++ H + ++K
Sbjct: 953 YDYSKEDPHEAGNKLAK 969
>BT010261-1|AAQ23579.1| 276|Drosophila melanogaster RE27803p
protein.
Length = 276
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 375 PNPEYRAGNAVRVEGPEYRDVTQQTLARGPSGTANGPAGLARGSMYQKSNKKTTK 429
PN + AG ++ + P+ + Q + + PS A+ P G+A + Q S KK K
Sbjct: 175 PNKDINAGLKMQQKAPQRQQ--QPSKSPAPSKNASQPVGIASQNPSQTSKKKKKK 227
>AF538714-1|AAN15143.1| 1255|Drosophila melanogaster histone
deacetylase dHDAC4 isoformb protein.
Length = 1255
Score = 29.5 bits (63), Expect = 9.5
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 58 VQKASEELIGLGYVKKDISAQQKKKDIPTPQPIK---KVVIMKTNEEKQLLKRQFELKYP 114
V+ +S E + G V SA K P P +K + KT E LLK LK
Sbjct: 200 VKSSSGESLPAGTVT---SAHPYKIPQPPPSLLKYESDFPLRKTASEPNLLK--IRLKQS 254
Query: 115 WIPERSVPAGGPTTAERNQRLQRDAVRQ 142
I ER GGP A R++RL + A R+
Sbjct: 255 VI-ERKARIGGPAGARRHERLLQAAQRR 281
>AE014298-1873|AAN09318.1| 1181|Drosophila melanogaster CG1770-PB,
isoform B protein.
Length = 1181
Score = 29.5 bits (63), Expect = 9.5
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 58 VQKASEELIGLGYVKKDISAQQKKKDIPTPQPIK---KVVIMKTNEEKQLLKRQFELKYP 114
V+ +S E + G V SA K P P +K + KT E LLK LK
Sbjct: 126 VKSSSGESLPAGTVT---SAHPYKIPQPPPSLLKYESDFPLRKTASEPNLLK--IRLKQS 180
Query: 115 WIPERSVPAGGPTTAERNQRLQRDAVRQ 142
I ER GGP A R++RL + A R+
Sbjct: 181 VI-ERKARIGGPAGARRHERLLQAAQRR 207
>AE014298-1872|AAF48245.2| 1248|Drosophila melanogaster CG1770-PA,
isoform A protein.
Length = 1248
Score = 29.5 bits (63), Expect = 9.5
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 58 VQKASEELIGLGYVKKDISAQQKKKDIPTPQPIK---KVVIMKTNEEKQLLKRQFELKYP 114
V+ +S E + G V SA K P P +K + KT E LLK LK
Sbjct: 197 VKSSSGESLPAGTVT---SAHPYKIPQPPPSLLKYESDFPLRKTASEPNLLK--IRLKQS 251
Query: 115 WIPERSVPAGGPTTAERNQRLQRDAVRQ 142
I ER GGP A R++RL + A R+
Sbjct: 252 VI-ERKARIGGPAGARRHERLLQAAQRR 278
>AE013599-455|AAF59226.1| 276|Drosophila melanogaster CG1360-PA
protein.
Length = 276
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 375 PNPEYRAGNAVRVEGPEYRDVTQQTLARGPSGTANGPAGLARGSMYQKSNKKTTK 429
PN + AG ++ + P+ + Q + + PS A+ P G+A + Q S KK K
Sbjct: 175 PNKDINAGLKMQQKAPQRQQ--QPSKSPAPSKNASQPVGIASQNPSQTSKKKKKK 227
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.313 0.131 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,107,506
Number of Sequences: 52641
Number of extensions: 1081197
Number of successful extensions: 2448
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2398
Number of HSP's gapped (non-prelim): 56
length of query: 435
length of database: 24,830,863
effective HSP length: 87
effective length of query: 348
effective length of database: 20,251,096
effective search space: 7047381408
effective search space used: 7047381408
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 63 (29.5 bits)
- SilkBase 1999-2023 -