Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002112-TA|BGIBMGA002112-PA|undefined
(140 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 24 0.44
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 22 2.4
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 21 4.1
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 20 7.2
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 20 7.2
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 20 7.2
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 20 7.2
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 20 7.2
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 20 7.2
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 20 7.2
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 20 7.2
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 20 9.6
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 20 9.6
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 20 9.6
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 20 9.6
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 24.2 bits (50), Expect = 0.44
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 61 KGLKPHLDARTFATPQESPVLGRALCLTPRGSPIPGRVSHL-NEKFQDSLTLNS 113
KG KP++ TF Q L R L PRGS + R +HL N+ F +T+N+
Sbjct: 440 KGGKPNV-LSTF-WQQSDLDLSRGLDFQPRGS-VFVRFTHLQNQDFTYKITVNN 490
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 21.8 bits (44), Expect = 2.4
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 23 VRNEQTTHGSPYHVHP 38
V+ + HG PY HP
Sbjct: 66 VKQQTAPHGPPYAPHP 81
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 21.0 bits (42), Expect = 4.1
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 53 SSPKLFHPKGLKPHLDARTFATPQESP 79
+S L PK K D T TP SP
Sbjct: 110 NSEPLVSPKSEKEEKDMETTLTPCASP 136
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 20.2 bits (40), Expect = 7.2
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 32 SPYHVHPYPSPVRLQHAFQA 51
+P+ PYP P L+ A A
Sbjct: 304 TPFLKRPYPVPFALRPAVDA 323
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.2 bits (40), Expect = 7.2
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 33 PYHVHPYPSP 42
PYH+ PY P
Sbjct: 288 PYHMSPYGHP 297
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.2 bits (40), Expect = 7.2
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 33 PYHVHPYPSP 42
PYH+ PY P
Sbjct: 288 PYHMSPYGHP 297
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.2 bits (40), Expect = 7.2
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 33 PYHVHPYPSP 42
PYH+ PY P
Sbjct: 288 PYHMSPYGHP 297
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 20.2 bits (40), Expect = 7.2
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 33 PYHVHPYPSP 42
PYH+ PY P
Sbjct: 244 PYHMSPYGHP 253
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 20.2 bits (40), Expect = 7.2
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 33 PYHVHPYPSP 42
PYH+ PY P
Sbjct: 288 PYHMSPYGHP 297
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 20.2 bits (40), Expect = 7.2
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 33 PYHVHPYPSP 42
PYH+ PY P
Sbjct: 76 PYHMSPYGHP 85
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 20.2 bits (40), Expect = 7.2
Identities = 6/10 (60%), Positives = 7/10 (70%)
Query: 33 PYHVHPYPSP 42
PYH+ PY P
Sbjct: 288 PYHMSPYGHP 297
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 19.8 bits (39), Expect = 9.6
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 101 LNEKFQDSLTLNSDTDSLVAKISAMFPTVSETHIKI 136
+++ D +N LVA I V +TH++I
Sbjct: 623 ISDHNDDETQVNRFVKLLVATIDEAASDVHQTHMRI 658
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 19.8 bits (39), Expect = 9.6
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 101 LNEKFQDSLTLNSDTDSLVAKISAMFPTVSETHIKI 136
+++ D +N LVA I V +TH++I
Sbjct: 623 ISDHNDDETQVNRFVKLLVATIDEAASDVHQTHMRI 658
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 19.8 bits (39), Expect = 9.6
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 101 LNEKFQDSLTLNSDTDSLVAKISAMFPTVSETHIKI 136
+++ D +N LVA I V +TH++I
Sbjct: 623 ISDHNDDETQVNRFVKLLVATIDEAASDVHQTHMRI 658
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 19.8 bits (39), Expect = 9.6
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 101 LNEKFQDSLTLNSDTDSLVAKISAMFPTVSETHIKI 136
+++ D +N LVA I V +TH++I
Sbjct: 623 ISDHNDDETQVNRFVKLLVATIDEAASDVHQTHMRI 658
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.320 0.133 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,651
Number of Sequences: 317
Number of extensions: 1598
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of query: 140
length of database: 114,650
effective HSP length: 51
effective length of query: 89
effective length of database: 98,483
effective search space: 8764987
effective search space used: 8764987
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.9 bits)
S2: 39 (19.8 bits)
- SilkBase 1999-2023 -