Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002112-TA|BGIBMGA002112-PA|undefined
(140 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M82829-1|AAA59972.1| 744|Homo sapiens fusion protein protein. 33 0.26
BT009911-1|AAP88913.1| 781|Homo sapiens promyelocytic leukemia ... 33 0.26
BC020994-1|AAH20994.1| 781|Homo sapiens promyelocytic leukemia ... 33 0.26
BC000080-1|AAH00080.2| 781|Homo sapiens promyelocytic leukemia ... 33 0.26
AF230410-1|AAG50189.1| 829|Homo sapiens tripartite motif protei... 33 0.26
M79464-1|AAA60390.1| 802|Homo sapiens PML protein. 32 0.60
AF230404-1|AAG50183.1| 854|Homo sapiens tripartite motif protei... 32 0.60
AF230403-1|AAG50182.1| 824|Homo sapiens tripartite motif protei... 32 0.60
BC107762-1|AAI07763.1| 172|Homo sapiens DISP1 protein protein. 32 0.79
BC007734-1|AAH07734.1| 542|Homo sapiens DISP1 protein protein. 32 0.79
AK098669-1|BAC05373.1| 542|Homo sapiens protein ( Homo sapiens ... 32 0.79
AY507107-1|AAS87021.1| 1043|Homo sapiens NMDA receptor subunit 3... 31 1.0
AY507106-1|AAS87020.1| 1043|Homo sapiens NMDA receptor subunit 3... 31 1.4
AY393345-1|AAR32399.1| 155|Homo sapiens immunoglobulin heavy ch... 30 3.2
AK096878-1|BAC04881.1| 317|Homo sapiens protein ( Homo sapiens ... 30 3.2
AK093253-1|BAC04110.1| 222|Homo sapiens protein ( Homo sapiens ... 30 3.2
AJ578053-1|CAE17331.1| 317|Homo sapiens VITO1 protein protein. 30 3.2
BC131559-1|AAI31560.1| 507|Homo sapiens QRICH2 protein protein. 29 4.2
BC130531-1|AAI30532.1| 491|Homo sapiens Cas-Br-M (murine) ecotr... 29 5.5
BC130529-1|AAI30530.1| 491|Homo sapiens Cas-Br-M (murine) ecotr... 29 5.5
BC027460-1|AAH27460.2| 488|Homo sapiens CBLL1 protein protein. 29 5.5
AC002467-2|AAS07390.1| 491|Homo sapiens unknown protein. 29 5.5
>M82829-1|AAA59972.1| 744|Homo sapiens fusion protein protein.
Length = 744
Score = 33.5 bits (73), Expect = 0.26
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 30 HGSPYHVHP-YPSPVR-LQHAFQAQSSP-KLFHPKGLKPHLDARTFATPQESP 79
H SP H P + SPV+ L A A S P +HP PH A ATP P
Sbjct: 501 HSSPAHSSPAHSSPVQSLLRAQGASSLPCGTYHPPAWPPHQPAEQAATPDAEP 553
>BT009911-1|AAP88913.1| 781|Homo sapiens promyelocytic leukemia
protein.
Length = 781
Score = 33.5 bits (73), Expect = 0.26
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 30 HGSPYHVHP-YPSPVR-LQHAFQAQSSP-KLFHPKGLKPHLDARTFATPQESP 79
H SP H P + SPV+ L A A S P +HP PH A ATP P
Sbjct: 538 HSSPAHSSPAHSSPVQSLLRAQGASSLPCGTYHPPAWPPHQPAEQAATPDAEP 590
>BC020994-1|AAH20994.1| 781|Homo sapiens promyelocytic leukemia
protein.
Length = 781
Score = 33.5 bits (73), Expect = 0.26
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 30 HGSPYHVHP-YPSPVR-LQHAFQAQSSP-KLFHPKGLKPHLDARTFATPQESP 79
H SP H P + SPV+ L A A S P +HP PH A ATP P
Sbjct: 538 HSSPAHSSPAHSSPVQSLLRAQGASSLPCGTYHPPAWPPHQPAEQAATPDAEP 590
>BC000080-1|AAH00080.2| 781|Homo sapiens promyelocytic leukemia
protein.
Length = 781
Score = 33.5 bits (73), Expect = 0.26
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 30 HGSPYHVHP-YPSPVR-LQHAFQAQSSP-KLFHPKGLKPHLDARTFATPQESP 79
H SP H P + SPV+ L A A S P +HP PH A ATP P
Sbjct: 538 HSSPAHSSPAHSSPVQSLLRAQGASSLPCGTYHPPAWPPHQPAEQAATPDAEP 590
>AF230410-1|AAG50189.1| 829|Homo sapiens tripartite motif protein
TRIM19 kappa protein.
Length = 829
Score = 33.5 bits (73), Expect = 0.26
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 30 HGSPYHVHP-YPSPVR-LQHAFQAQSSP-KLFHPKGLKPHLDARTFATPQESP 79
H SP H P + SPV+ L A A S P +HP PH A ATP P
Sbjct: 586 HSSPAHSSPAHSSPVQSLLRAQGASSLPCGTYHPPAWPPHQPAEQAATPDAEP 638
>M79464-1|AAA60390.1| 802|Homo sapiens PML protein.
Length = 802
Score = 32.3 bits (70), Expect = 0.60
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Query: 30 HGSPYHVHPYPSPVRLQHAFQAQSSPKLFHPKGLKPHLDARTFATPQESP 79
H SP H P S +R Q A +HP PH A ATP P
Sbjct: 564 HSSPAHSSPVQSLLRAQGASSLPCGT--YHPPAWPPHQPAEQAATPDAEP 611
>AF230404-1|AAG50183.1| 854|Homo sapiens tripartite motif protein
TRIM19 delta protein.
Length = 854
Score = 32.3 bits (70), Expect = 0.60
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Query: 30 HGSPYHVHPYPSPVRLQHAFQAQSSPKLFHPKGLKPHLDARTFATPQESP 79
H SP H P S +R Q A +HP PH A ATP P
Sbjct: 586 HSSPAHSSPVQSLLRAQGASSLPCGT--YHPPAWPPHQPAEQAATPDAEP 633
>AF230403-1|AAG50182.1| 824|Homo sapiens tripartite motif protein
TRIM19 gamma protein.
Length = 824
Score = 32.3 bits (70), Expect = 0.60
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Query: 30 HGSPYHVHPYPSPVRLQHAFQAQSSPKLFHPKGLKPHLDARTFATPQESP 79
H SP H P S +R Q A +HP PH A ATP P
Sbjct: 586 HSSPAHSSPVQSLLRAQGASSLPCGT--YHPPAWPPHQPAEQAATPDAEP 633
>BC107762-1|AAI07763.1| 172|Homo sapiens DISP1 protein protein.
Length = 172
Score = 31.9 bits (69), Expect = 0.79
Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Query: 27 QTTHGSPYHVHPYPSPVRLQ--HAFQAQSSPKLFHPKGLKPHLDARTFATPQESPVLGRA 84
Q H PYH HP S Q H ++P ++PH + P SPV
Sbjct: 80 QCCHPCPYH-HPLTSHSSHQECHPNAGPAAPSALASCCMQPHSEYSASLCPNHSPVYQTT 138
Query: 85 LCLTPRGS 92
CL P S
Sbjct: 139 CCLQPSPS 146
>BC007734-1|AAH07734.1| 542|Homo sapiens DISP1 protein protein.
Length = 542
Score = 31.9 bits (69), Expect = 0.79
Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Query: 27 QTTHGSPYHVHPYPSPVRLQ--HAFQAQSSPKLFHPKGLKPHLDARTFATPQESPVLGRA 84
Q H PYH HP S Q H ++P ++PH + P SPV
Sbjct: 80 QCCHPCPYH-HPLTSHSSHQECHPEAGPAAPSALASCCMQPHSEYSASLCPNHSPVYQTT 138
Query: 85 LCLTPRGS 92
CL P S
Sbjct: 139 CCLQPSPS 146
>AK098669-1|BAC05373.1| 542|Homo sapiens protein ( Homo sapiens
cDNA FLJ25803 fis, clone TST07160. ).
Length = 542
Score = 31.9 bits (69), Expect = 0.79
Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Query: 27 QTTHGSPYHVHPYPSPVRLQ--HAFQAQSSPKLFHPKGLKPHLDARTFATPQESPVLGRA 84
Q H PYH HP S Q H ++P ++PH + P SPV
Sbjct: 80 QCCHPCPYH-HPLTSHSSHQECHPEAGPAAPSALASCCMQPHSEYSASLCPNHSPVYQTT 138
Query: 85 LCLTPRGS 92
CL P S
Sbjct: 139 CCLQPSPS 146
>AY507107-1|AAS87021.1| 1043|Homo sapiens NMDA receptor subunit 3B
protein.
Length = 1043
Score = 31.5 bits (68), Expect = 1.0
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 65 PHLDARTFATPQESPVL----GRALCLTPRGSPIPGRVSHLNEKFQ 106
P DA A P+E PV GR P G+P PG++ L + +
Sbjct: 946 PEADAEAEAAPREGPVWLCSNGRPPAARPTGAPQPGKLQELERRIE 991
>AY507106-1|AAS87020.1| 1043|Homo sapiens NMDA receptor subunit 3B
protein.
Length = 1043
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 65 PHLDARTFATPQESPVL----GRALCLTPRGSPIPGRVSHLNEKFQ 106
P DA A P+E PV GR P G+P PG++ L + +
Sbjct: 946 PEADAEAEAAPREGPVWLCSNGRPPAARPTGAPQPGKLQELERRIK 991
>AY393345-1|AAR32399.1| 155|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 155
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 93 PIPGRVSHLNEKFQDSLTLNSDTDSLVAKISAMFPTVSETHI 134
PIPG H + FQ LT+N+DT + A + T +T +
Sbjct: 49 PIPGTTIHA-QNFQGRLTINADTSTTTAYMDLSSLTSDDTAV 89
>AK096878-1|BAC04881.1| 317|Homo sapiens protein ( Homo sapiens
cDNA FLJ39559 fis, clone SKMUS2000701, weakly similar to
VESTIGIAL PROTEIN. ).
Length = 317
Score = 29.9 bits (64), Expect = 3.2
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 9/83 (10%)
Query: 19 HVCTVRNEQTTHGSPYHVHPYPSPVRLQHAFQAQSSPKLFHPKGLKPHLDARTFATPQES 78
H+ E H P+H HP+ P L A AQ++P +P+ H P+
Sbjct: 185 HLHQGATEPWHHAHPHHAHPH-HPYALGGALGAQAAP---YPRPAAVHEVYAPHFDPRYG 240
Query: 79 PVL-----GRALCLTPRGSPIPG 96
P+L GR L +P PG
Sbjct: 241 PLLMPAASGRPARLATAPAPAPG 263
>AK093253-1|BAC04110.1| 222|Homo sapiens protein ( Homo sapiens
cDNA FLJ35934 fis, clone TESTI2011315. ).
Length = 222
Score = 29.9 bits (64), Expect = 3.2
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
Query: 24 RNEQTTHGSPYHVHPYPSPVRLQH-----AFQAQSSPK-LFHPKGLKPHLDARTFATPQE 77
RN T SP + +P P+ L+H F Q P F P+ L L T P
Sbjct: 125 RNLLPTFFSPPPIVFFPQPLILRHLLPLPTFSQQRLPAAFFSPRTLFSPLPLPTVFAPDR 184
Query: 78 S---PVLGRALCLTPRGSP 93
P+L + CL+PR +P
Sbjct: 185 RLAHPLLALSNCLSPRSAP 203
>AJ578053-1|CAE17331.1| 317|Homo sapiens VITO1 protein protein.
Length = 317
Score = 29.9 bits (64), Expect = 3.2
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 9/83 (10%)
Query: 19 HVCTVRNEQTTHGSPYHVHPYPSPVRLQHAFQAQSSPKLFHPKGLKPHLDARTFATPQES 78
H+ E H P+H HP+ P L A AQ++P +P+ H P+
Sbjct: 185 HLHQGATEPWHHAHPHHAHPH-HPYALGGALGAQAAP---YPRPAAVHEVYAPHFDPRYG 240
Query: 79 PVL-----GRALCLTPRGSPIPG 96
P+L GR L +P PG
Sbjct: 241 PLLMPAASGRPARLATAPAPAPG 263
>BC131559-1|AAI31560.1| 507|Homo sapiens QRICH2 protein protein.
Length = 507
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 63 LKPHLDARTFATPQESPVLGRALCLTPRGSPIPGRVS 99
L H + P E+PV G A+ +TP G +PG S
Sbjct: 263 LLAHFHCLSCDRPLETPVTGHAIPVTPAGPGLPGHHS 299
>BC130531-1|AAI30532.1| 491|Homo sapiens Cas-Br-M (murine)
ecotropic retroviral transforming sequence-like 1
protein.
Length = 491
Score = 29.1 bits (62), Expect = 5.5
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
Query: 33 PYHVHPYPSPVRLQHAFQAQSSPKLFH--PKGLKPHL-DARTFATPQESP-VLGRALCLT 88
PY HP P P QH ++P H P L D T + P P + +
Sbjct: 397 PYMNHPPPGPPPPQHGGPPVTAPPPHHYNPNSLPQFTEDQGTLSPPFTQPGGMSPGIWPA 456
Query: 89 PRGSPIPGRV 98
PRG P P R+
Sbjct: 457 PRGPPPPPRL 466
>BC130529-1|AAI30530.1| 491|Homo sapiens Cas-Br-M (murine)
ecotropic retroviral transforming sequence-like 1
protein.
Length = 491
Score = 29.1 bits (62), Expect = 5.5
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
Query: 33 PYHVHPYPSPVRLQHAFQAQSSPKLFH--PKGLKPHL-DARTFATPQESP-VLGRALCLT 88
PY HP P P QH ++P H P L D T + P P + +
Sbjct: 397 PYMNHPPPGPPPPQHGGPPVTAPPPHHYNPNSLPQFTEDQGTLSPPFTQPGGMSPGIWPA 456
Query: 89 PRGSPIPGRV 98
PRG P P R+
Sbjct: 457 PRGPPPPPRL 466
>BC027460-1|AAH27460.2| 488|Homo sapiens CBLL1 protein protein.
Length = 488
Score = 29.1 bits (62), Expect = 5.5
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
Query: 33 PYHVHPYPSPVRLQHAFQAQSSPKLFH--PKGLKPHL-DARTFATPQESP-VLGRALCLT 88
PY HP P P QH ++P H P L D T + P P + +
Sbjct: 394 PYMNHPPPGPPPPQHGGPPVTAPPPHHYNPNSLPQFTEDQGTLSPPFTQPGGMSPGIWPA 453
Query: 89 PRGSPIPGRV 98
PRG P P R+
Sbjct: 454 PRGPPPPPRL 463
>AC002467-2|AAS07390.1| 491|Homo sapiens unknown protein.
Length = 491
Score = 29.1 bits (62), Expect = 5.5
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
Query: 33 PYHVHPYPSPVRLQHAFQAQSSPKLFH--PKGLKPHL-DARTFATPQESP-VLGRALCLT 88
PY HP P P QH ++P H P L D T + P P + +
Sbjct: 397 PYMNHPPPGPPPPQHGGPPVTAPPPHHYNPNSLPQFTEDQGTLSPPFTQPGGMSPGIWPA 456
Query: 89 PRGSPIPGRV 98
PRG P P R+
Sbjct: 457 PRGPPPPPRL 466
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.320 0.133 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,857,704
Number of Sequences: 224733
Number of extensions: 1055318
Number of successful extensions: 2350
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 2343
Number of HSP's gapped (non-prelim): 30
length of query: 140
length of database: 73,234,838
effective HSP length: 83
effective length of query: 57
effective length of database: 54,581,999
effective search space: 3111173943
effective search space used: 3111173943
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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