Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002111-TA|BGIBMGA002111-PA|undefined
(235 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 29 0.44
SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyce... 29 0.78
SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual 29 0.78
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 28 1.0
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 28 1.0
SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain pro... 28 1.0
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 28 1.0
SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr... 28 1.4
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 28 1.4
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 27 2.4
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 27 3.1
SPAC18G6.15 |mal3||EB1 family Mal3|Schizosaccharomyces pombe|chr... 27 3.1
SPCC1281.03c |||DUF1077 family protein|Schizosaccharomyces pombe... 27 3.1
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam... 26 4.1
SPAC32A11.03c |phx1||homeobox transcription factor Phx1|Schizosa... 26 4.1
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 26 5.5
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 26 5.5
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 25 7.2
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 25 7.2
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 7.2
SPAC140.04 |||conserved fungal protein|Schizosaccharomyces pombe... 25 7.2
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 25 9.6
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 25 9.6
SPCC4G3.03 |||WD repeat protein|Schizosaccharomyces pombe|chr 3|... 25 9.6
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 25 9.6
SPAC25B8.15c |||wybutosine biosynthesis protein Tyw3|Schizosacch... 25 9.6
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 29.5 bits (63), Expect = 0.44
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 147 KIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQ--LPMLTDTIPK 204
K+Q ++E R ES C+ I EE QK +K L N+ E ++ LQ M T+
Sbjct: 387 KLQNEIDECRRNLLWAESSCETI-REENQKNIKKL-NDAESLKSRLLQSRTQMQTELDSY 444
Query: 205 ILRKTKMEQELKQLEKDIALVES 227
I ++++ E+ L++ ++ E+
Sbjct: 445 ITSNSQLKDEITSLKQTVSESEA 467
>SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 28.7 bits (61), Expect = 0.78
Identities = 13/57 (22%), Positives = 30/57 (52%)
Query: 108 LVDTRDGHIKKIKGSGEVPEYCLRPDFGRVPEYLVRRNRKIQKALEEIRLADQNKES 164
L D + K S ++P++ L D + + + ++++ LEEIR +Q++++
Sbjct: 70 LEDNEKSNDNKSNTSSKIPDWVLEQDLKIQKDLVKETHARLEQRLEEIRKRNQSRKN 126
>SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1279
Score = 28.7 bits (61), Expect = 0.78
Identities = 26/134 (19%), Positives = 56/134 (41%), Gaps = 5/134 (3%)
Query: 98 KTKAQPVEPRLVDTRDGHIKKIKGSGEVPEYCLRPDFGRVPEYLVRRNRKIQKALEEIRL 157
K + +E RL++ + +++ EVP+ C+ GR+ RK L +
Sbjct: 1018 KEIVEALETRLLEIVEELKNQVEEKIEVPQRCISSIIGRMGSTRRDIERKTSTMLNIPNV 1077
Query: 158 ADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRKTKMEQELKQ 217
D + ++ E + K++ E + + Q+ + DT+ + + K + +K+
Sbjct: 1078 LDPEETVTITIVGSPENCEKAKEMIQ--EKVASQYTQMITVPDTVYESIMKGIL---MKK 1132
Query: 218 LEKDIALVESNPYI 231
L D+ + P I
Sbjct: 1133 LRSDLKVFVDTPEI 1146
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 28.3 bits (60), Expect = 1.0
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 119 IKGSGEVPEYCLRPDFGRVPEYLVRRNRKIQKALEEIRLADQNKESLCKLISEEERQKLL 178
IKG V Y P V + V R + ++ I LA + + K + + +
Sbjct: 570 IKGIEVVINY-EAPATHEVYLHRVGRTARAGRSGRAITLAGEGDRKVLKGVFKNSSAQNT 628
Query: 179 KDLKNNWEL--MQKAFLQLPMLTDTIPKILRKTKMEQELKQLEKDI 222
K + N + ++K ++ L + K+L + K E+ELK E+D+
Sbjct: 629 KLVNRNLDFNKVEKFGKEIEELEPVVQKVLDEEKQERELKIAERDL 674
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 28.3 bits (60), Expect = 1.0
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 141 LVRRNRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTD 200
L R ++ I+K E I +QN+E+L ++ E + L+ LK ++ + + + +L
Sbjct: 840 LERMHKFIEKDQESIDNYEQNREALESEVATAEAE--LELLKEDF-ASENSKTEKILLAA 896
Query: 201 TIPKILRKTKMEQELKQLEKDIALVESNPYIYIYE 235
+ K++ K ++ EL +L +I L+ES Y+ E
Sbjct: 897 SEKKLVGK-RLVSELTKLSGNITLLESEIDRYVSE 930
>SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 240
Score = 28.3 bits (60), Expect = 1.0
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 149 QKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRK 208
+++ EE++ A + K E+ER L++ K N++++QK+ D + +RK
Sbjct: 39 KRSPEELKQAIEALREKAKEKKEKERILALEEKKTNYKILQKS-------NDETAQAMRK 91
Query: 209 TKMEQELKQLEK 220
+ + L+ L+K
Sbjct: 92 MQDQARLRDLQK 103
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 28.3 bits (60), Expect = 1.0
Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 141 LVRRNRKIQKALEEIRLADQNKESLCKLISEEE---RQKLLKDLKNNWELMQKAFLQLPM 197
L N + L D+N S+ L SEE+ QK L ++++N+ Q L
Sbjct: 149 LEHENGILSLQLSSSNKKDKNTSSVTTLTSEEDVSYFQKKLTNMESNFSAKQSEAYDLSR 208
Query: 198 LTDTIPKILRKTKMEQELKQLEKDIALVESN 228
T+ + L K E++ +++++D++ ++++
Sbjct: 209 QLLTVTEKL--DKKEKDYEKIKEDVSSIKAS 237
>SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 515
Score = 27.9 bits (59), Expect = 1.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 197 MLTDTIPKILRKTKMEQELKQLEKDIALVESNPYIYI 233
M T + ILRK + E+ Q+EK + +E N Y Y+
Sbjct: 1 MNTRNMFDILRKGIFKDEITQIEKILLKMEDNTYEYV 37
Score = 25.8 bits (54), Expect = 5.5
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 90 ILNIKKAIKTKAQPVEPRLVDTRDGHIKKIKGSGEVPEYCLRPDFGRVPEYLVRRNRKIQ 149
+L + KAI ++P+L + ++K IK S E F E + + +KI
Sbjct: 51 LLKLTKAITEYLSNLKPQLSKQENIYVKHIKSSNEAKTEL--EIFNCYKEISISKEKKIN 108
Query: 150 KALEEIRLADQN 161
L+ +R + Q+
Sbjct: 109 SLLKLVRESAQD 120
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 27.9 bits (59), Expect = 1.4
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 161 NKESLCKLISEEERQKLLKDLKNNWELMQKAFL-QLPMLTD 200
+K C L +EEER ++L+ L N + + A L +L LTD
Sbjct: 766 DKLIFCDLPNEEERLEVLQKLANRFHIENAAMLKKLSTLTD 806
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 27.1 bits (57), Expect = 2.4
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 142 VRRNRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDT 201
+R +Q+ E+R N + I +Q L+ +K EL++K +L + T
Sbjct: 42 IRGGGSLQEKNAELRAELDNIRNAQAAI-RSSKQTLINKVKAQDELLKKKVKELTAMKKT 100
Query: 202 IPKILRKTKMEQELKQLE 219
+P + ++++ +KQL+
Sbjct: 101 VP-FKSEVELDKHVKQLQ 117
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 185 WELMQKAFLQLPMLTDTIPKILRKTKME--QELKQLEKDIALVESN 228
W K++L P+L+ + I+RKT ++ E+K+L I +N
Sbjct: 1785 WISSSKSYLYSPLLSSHVEVIMRKTFLQLLSEIKRLGAHIIHASAN 1830
>SPAC18G6.15 |mal3||EB1 family Mal3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 308
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 183 NNWELMQKAFLQLPMLTDTIPKILRKTKMEQELK 216
NNW+++Q+ FL+ + P+ L + KM+ L+
Sbjct: 60 NNWKVLQQVFLKKGIDKVVDPERLSRCKMQDNLE 93
>SPCC1281.03c |||DUF1077 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 193
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 149 QKALEEIRLADQNKESLCKLISEEERQKLLKDL--KNNWELMQKAFLQLPM 197
QK+L + N S + ++ E ++L KDL K WEL Q+PM
Sbjct: 39 QKSLVSKNIHSGNSASSTSIFAKRE-EELQKDLLLKKAWELAYSPLKQIPM 88
>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 165 LCKLISEEERQKLLKDLKNNWELMQKAFLQLPML 198
LC+L + E +++L ++ N L+QK FL++ +L
Sbjct: 110 LCRLANLEMQKELSIEVNMNVTLVQKQFLEMVIL 143
>SPAC32A11.03c |phx1||homeobox transcription factor
Phx1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Query: 160 QNKESLCKLIS---EEERQKLLKDLKNNWELMQK 190
QN+ + KLIS EEERQ++L++ + L QK
Sbjct: 215 QNRRAKSKLISRRQEEERQRILREQRELDSLNQK 248
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 25.8 bits (54), Expect = 5.5
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 143 RRNRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTI 202
R K ++ EE L + +E +L +EERQK+ +++ + QKA L+D
Sbjct: 878 REKEKARRLAEEEALLKEKQERERQL--QEERQKMQEEVLEWRKSQQKASEDDMSLSDDE 935
Query: 203 PKILRKTKMEQELKQLEK 220
K K K + K+ K
Sbjct: 936 EKQSGKKKKKDRKKRKSK 953
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/34 (29%), Positives = 21/34 (61%)
Query: 143 RRNRKIQKALEEIRLADQNKESLCKLISEEERQK 176
R N ++ +EE++L +Q + L+S+E+ +K
Sbjct: 446 RLNPALKNYMEELKLLEQQNKKRLLLVSQEKERK 479
>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2344
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/40 (27%), Positives = 23/40 (57%)
Query: 177 LLKDLKNNWELMQKAFLQLPMLTDTIPKILRKTKMEQELK 216
++K + L+QK+ + DT+P +L K + ++EL+
Sbjct: 1642 IIKAQREALNLVQKSEAKYRSFVDTMPCLLSKLEFDEELR 1681
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 25.4 bits (53), Expect = 7.2
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 145 NRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKA-FLQLPMLTDTIP 203
N + ++E R NKE+L ++ R K LK + + L +KA L+
Sbjct: 366 NANYETEMKEARQKLNNKEALISHYDDDFRAKELKISRLSESLREKAGLLEFQSSVSEQR 425
Query: 204 KILRKTKMEQELKQLE 219
+L + +++ +K +E
Sbjct: 426 DLLYQEQIQSSIKDME 441
>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 867
Score = 25.4 bits (53), Expect = 7.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 93 IKKAIKTKAQPVEPRLVDTRDGHIKKIKGSGEVPE 127
I +A T QP EP VDT + K + S PE
Sbjct: 161 ISRAESTAIQPSEPHDVDTSKNGLSKKQHSEAQPE 195
>SPAC140.04 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 295
Score = 25.4 bits (53), Expect = 7.2
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 171 EEERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRKTKMEQELKQLEKDIAL 224
E+ER++ L LK E+ K Q T+ + LR K+E+ K LE+D A+
Sbjct: 232 EKEREEQLLSLK---EIHAKVTQQQRKNTEDV-LTLRDKKLEERRKFLERDYAI 281
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 25.0 bits (52), Expect = 9.6
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 156 RLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQL 195
RLAD S C++ ++ +++K +KAFL L
Sbjct: 1019 RLADAGIASRCEICEINDKNEIVKTRSQRIHSKKKAFLSL 1058
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 25.0 bits (52), Expect = 9.6
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 153 EEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAF--LQLPMLTDTIPKILRKTK 210
+E L + KES KL S+EE K+ ++L+++ + Q P + IP+ K++
Sbjct: 159 QETNLQKEKKESKVKLESKEE--KISRNLRSSSRSISPVTEQPQSPKIQPVIPEKKEKSE 216
Query: 211 MEQELKQLEK 220
++ L K
Sbjct: 217 KKESSMTLRK 226
>SPCC4G3.03 |||WD repeat protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 347
Score = 25.0 bits (52), Expect = 9.6
Identities = 13/50 (26%), Positives = 21/50 (42%)
Query: 152 LEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDT 201
L +AD S C IS+ + ++ + +L+ PMLT T
Sbjct: 195 LRHTTVADTTDSSFCTSISQRNELFAVASQDSSLSVFDVRYLRTPMLTKT 244
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 25.0 bits (52), Expect = 9.6
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 163 ESLCKLISEEERQKLLKDLKNNWELMQK 190
+ LCK+I+EE K ++D + + + +Q+
Sbjct: 112 KELCKMINEEPELKAIEDTEESKKQLQR 139
>SPAC25B8.15c |||wybutosine biosynthesis protein
Tyw3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 237
Score = 25.0 bits (52), Expect = 9.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 133 DFGRVPEYLVRRNRKIQKALEEIRLADQNK 162
++G+VP V NR+IQ A E + L Q +
Sbjct: 98 EYGKVPSSPVEGNREIQYAFEPMILHVQTR 127
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.137 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 966,763
Number of Sequences: 5004
Number of extensions: 36775
Number of successful extensions: 159
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 141
Number of HSP's gapped (non-prelim): 33
length of query: 235
length of database: 2,362,478
effective HSP length: 71
effective length of query: 164
effective length of database: 2,007,194
effective search space: 329179816
effective search space used: 329179816
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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