Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002111-TA|BGIBMGA002111-PA|undefined
(235 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51929| Best HMM Match : ARID (HMM E-Value=1.2) 100 2e-21
SB_9537| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_51224| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.051
SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_14572| Best HMM Match : ANF_receptor (HMM E-Value=6.7e-18) 33 0.20
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) 32 0.36
SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24) 31 0.62
SB_40388| Best HMM Match : Kinesin (HMM E-Value=0) 31 0.62
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 31 0.82
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_23891| Best HMM Match : P60 (HMM E-Value=2.2) 30 1.9
SB_18221| Best HMM Match : HHH (HMM E-Value=0.65) 30 1.9
SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_31304| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38) 29 2.5
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 29 3.3
SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 29 3.3
SB_35536| Best HMM Match : zf-C2H2 (HMM E-Value=0.0069) 29 3.3
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_31580| Best HMM Match : Ion_trans (HMM E-Value=0.043) 28 5.8
SB_5137| Best HMM Match : Phage_integrase (HMM E-Value=0.11) 28 5.8
SB_34944| Best HMM Match : DUF1087 (HMM E-Value=6.9) 28 5.8
SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17) 28 5.8
SB_45045| Best HMM Match : Kinesin (HMM E-Value=0) 28 7.7
SB_1177| Best HMM Match : PEARLI-4 (HMM E-Value=0.46) 28 7.7
SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06) 28 7.7
SB_8007| Best HMM Match : HisKA_3 (HMM E-Value=4.2) 28 7.7
SB_770| Best HMM Match : DUF837 (HMM E-Value=1.4) 28 7.7
>SB_51929| Best HMM Match : ARID (HMM E-Value=1.2)
Length = 391
Score = 99.5 bits (237), Expect = 2e-21
Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 2/144 (1%)
Query: 87 NFKILNIKKAIKTKAQPVEPRLVDTRDGHIKKIKGSGEVPEYCLRPDFGRVPEYLVRRNR 146
NF N + I + + E + DTRDG + SG P+Y + D+G+ P+YL RR
Sbjct: 113 NFITTNAVENIMSVPKKPEKKFADTRDGSTHPLTPSGLTPKYTQKKDYGKTPQYLERRKA 172
Query: 147 KIQKALEEIR--LADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTIPK 204
+ ++A + + ++ ++ K +S ERQ ++ LK NWE + + L ++TDT PK
Sbjct: 173 ETERAQADYDSYIQERMRQGAMKQMSYGERQAIIDGLKKNWEDLHHQYQGLSVVTDTAPK 232
Query: 205 ILRKTKMEQELKQLEKDIALVESN 228
RK +ME E+KQLE+DI ++E +
Sbjct: 233 KARKERMEAEMKQLERDIDMIEKH 256
>SB_9537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 50.4 bits (115), Expect = 1e-06
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 116 IKKIKGSGEVPEYCLRP-DFGRVPEYLVRRNRKIQKALEEIRLADQNKESLCK---LISE 171
++++K + E R +G VP+YL R ++ +K EE R+A+ S+ L+
Sbjct: 258 LEELKQKKKAEEELYRTKSYGNVPKYLKTRQQQWKKE-EETRIANIPDPSIPPGHTLMQR 316
Query: 172 EERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRKTKMEQELKQLEKDIALVESNPYI 231
+ER K L L+ N E + LP+ DT+ RKT++E+ L ++E I + S P +
Sbjct: 317 DERLKTLDALQKNQEELLNELRLLPVRVDTLRVRTRKTELERRLTEIENAIKIF-SRPKV 375
Query: 232 YI 233
++
Sbjct: 376 FV 377
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 37.9 bits (84), Expect = 0.007
Identities = 37/147 (25%), Positives = 76/147 (51%), Gaps = 15/147 (10%)
Query: 94 KKAIKTKAQPVEPRLVDTRDGHIKKI----KGSGEVPEYCLRPDFGRVPEYLVRRNRKIQ 149
K ++ ++ +E L + +D H K+I KG+GE + L ++ E + ++ +
Sbjct: 1303 KNSLSSQVNSLEQELANLKDKHSKEIEKFAKGAGE-NKSLLDQKVSQMKEKVRGIKKEFE 1361
Query: 150 KAL-EEIRLADQNKESLCKLISEE-----ERQKLLKDLKNNWELMQKAFL-QLPMLTDTI 202
+ L E+ +L +Q K+ L + E ER+K DLK ++L +KA L +L ++
Sbjct: 1362 EKLAEKSKLEEQLKQRLLDMEKESQNRLLEREKAEADLKEKFDLEEKALLDKLAEKENSE 1421
Query: 203 PKILRK---TKMEQELKQLEKDIALVE 226
+++++ T+ E + K +KD ++ E
Sbjct: 1422 HELMQRIESTEQENQAKLNQKDKSIEE 1448
Score = 31.5 bits (68), Expect = 0.62
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 151 ALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQL-PMLTDTIPKILRKT 209
AL+E + ++NKE C+L + E +K + +L N+ L + ++ L T+ K K
Sbjct: 825 ALKEFQ--EKNKELECQLAATGELKKTVDELSNSITLRDEKITKIKEQLKQTLEKFKEKE 882
Query: 210 K-MEQELKQLEK 220
K +++E+ + EK
Sbjct: 883 KALKEEIAEKEK 894
>SB_51224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 808
Score = 35.1 bits (77), Expect = 0.051
Identities = 21/87 (24%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 143 RRNRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTI 202
R+N+ ++K++ + + E +L S+E +K ++L+N + +QK F T
Sbjct: 530 RKNKALEKSVNGLEKEIKKMEQNYELKSKESDEKFHRELQNTKDRLQKDFQSFHQRTSEN 589
Query: 203 PKIL--RKTKMEQELKQLEKDIALVES 227
+ + R K+E+E LE +++ + S
Sbjct: 590 SQSMQDRILKLEEERNSLEVEVSRLRS 616
>SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1218
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/86 (24%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 144 RNRKIQKALEEIRLA-DQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTI 202
RNR+++K L ++ D ++S + + +QK +++ + E+ + ++T
Sbjct: 788 RNRELEKELSKLNTKLDAVEDSHRRELELRVQQKSVRNTELELEVAKMKIENRQLVTQLK 847
Query: 203 PKILRKTKMEQELKQLEKDIALVESN 228
K T+++QE++ L K +A VE+N
Sbjct: 848 AKTSHNTELQQEVEVLIKKLANVENN 873
>SB_14572| Best HMM Match : ANF_receptor (HMM E-Value=6.7e-18)
Length = 808
Score = 33.1 bits (72), Expect = 0.20
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 144 RNRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTIP 203
R++KIQ ALE +N+E KL E+++ + + + E+++ + L L LT +
Sbjct: 108 RSKKIQSALER-----ENREQQKKL--RLEKKQAVNETEKAKEILRTSRLTLNKLTGDVA 160
Query: 204 KILRKTKMEQELKQLEKDI 222
+ L +TK + Q EKDI
Sbjct: 161 ENLWETKGMKHALQAEKDI 179
>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
Length = 1774
Score = 32.3 bits (70), Expect = 0.36
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 145 NRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTIPK 204
N K + A+ + + C L +EE+ Q+LL ++ ++KA + + K
Sbjct: 940 NEKEKYAMPPLLRKSSSTGDACILKAEEQNQQLLANISILETNLKKAKSEGKKCAFKLSK 999
Query: 205 ILRKTKMEQE-LKQLEKDIALVESN 228
+++ K +Q+ +K+LE + +ESN
Sbjct: 1000 LIKADKQKQDCIKELEGKVKALESN 1024
>SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24)
Length = 1592
Score = 31.5 bits (68), Expect = 0.62
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 89 KILNIKKAIKTKAQPVEPRLVDTRDGHIKKIKGSGEVPEYCLRPDFGRVPEYLVRRNRKI 148
+ L+ KA+ K Q RL + ++++I+ E+ +PDF V +V RK+
Sbjct: 1458 RFLDSLKALADKGQRTVYRLTLVKSWNVEEIQSYVELVSLG-KPDFIEVK--VVGFVRKL 1514
Query: 149 QKALEEIRLADQNKESLCKLISEEERQK 176
+ L + LA +++ S C L++ ++ +K
Sbjct: 1515 EDQLPDYELASEHEHSNCVLLAHKKIEK 1542
>SB_40388| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 500
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/79 (22%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 149 QKALEEIRLADQNKESLCK-LISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILR 207
++ L +R AD+ K +CK +++E+ K++++LK +++ L D + IL
Sbjct: 216 EETLSTLRYADRAKHIMCKAIVNEDPNAKVIRELKQEVLRLKEILLSEGYAVDQLNSIL- 274
Query: 208 KTKMEQELKQLEKDIALVE 226
Q++++ +D +E
Sbjct: 275 -ANPVQQMRRTSQDGTTLE 292
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 31.5 bits (68), Expect = 0.62
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 136 RVPEYLVRRNRKIQKALEEIR----LADQNKESLCKLISEEERQKLLKDLKNNWELMQKA 191
++ E L RR +++QK EE++ L +Q + KL+ E+E K K L+ EL +
Sbjct: 283 QIQEQLQRR-KQLQKMQEELKHRKLLQEQEELKHRKLLQEQEELKHRKFLQEQEELKHRK 341
Query: 192 FLQLPMLTDTIPKILRKTKMEQELKQLE 219
LQ D I K + + ++ELKQ E
Sbjct: 342 LLQ--EKEDEI-KHRKLIQQQEELKQRE 366
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/82 (23%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 144 RNRKIQKALEEIR----LADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLT 199
++RK+ + EE++ L Q + KL+ ++ER K +++++ L ++ L+ L
Sbjct: 351 KHRKLIQQQEELKQRELLKQQEVKKQQKLLKQQERLKQQEEIRHRQLLKEQEELKHRKLL 410
Query: 200 DTIPKILRKTKMEQELKQLEKD 221
K+ K E++LK +++
Sbjct: 411 QEQQKLQHKKLQEEKLKHQKQE 432
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 31.1 bits (67), Expect = 0.82
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 145 NRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTIPK 204
N +IQ +EE R + ES K + E+ + ++LK + ++ + QL L + I +
Sbjct: 939 NDEIQTLIEEQRELVRKYESQIKTVVEDSKTRILKLINDHENVETDYKKQLKALKNEILR 998
Query: 205 ILRKTKMEQELKQLEKD 221
+ + + E E++QL+ D
Sbjct: 999 V--EDEHEVEIRQLKSD 1013
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 131 RPDFGRVPEYLVRRNRKIQKALEEIRLADQNKESLCKLISEEERQK--LLKDLKNNWELM 188
R D + YLV +K K EE++ + E+L + E ERQK L ++K + +
Sbjct: 3350 RNDMAELKRYLVESEKKKTKLEEEVKRVRRRLENLKQKAIELERQKDDELCEVKGDKVSL 3409
Query: 189 QKAFLQLPMLTDTIPKILRKTKMEQELKQLEKD 221
+K +L + + L+ + E++ + E D
Sbjct: 3410 EKEQWELREAIEELRATLKGVEEERDRYENELD 3442
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Query: 129 CLRPDFGRVPEYLVRRNRKIQKALEEIRLADQNKESLCKLISE--EERQKLLKDLKNNWE 186
C+ +F + ++L + QK +EIR ++ +S L+ E EE + L ++ N E
Sbjct: 2648 CMHREFAFLKDHLTNFKQSCQKQSDEIRRIKEDLKSKESLLQETKEELEALKEENSENKE 2707
Query: 187 LMQKAFLQLPMLTDTIPKILRKTK-MEQELKQLEKDIALVESN 228
+ + L + K + +EL Q + IA +E N
Sbjct: 2708 TILHLQGKCTDLETLFAEYESKAETTHEELVQANQTIAALEGN 2750
>SB_23891| Best HMM Match : P60 (HMM E-Value=2.2)
Length = 1167
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/96 (21%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 135 GRVPEYLVRRNRKIQK---ALEEIRLADQNK-ESLCKLISEEERQKLLKDLKNNWELMQK 190
G + E V+++ K + A+ ++ +++K E + K+ E E QK +K + ++
Sbjct: 213 GELEEVEVQKDAKASEEETAIVDVEGVEEDKVEGVAKVQDEVEEQKEVKASEEETAVVDV 272
Query: 191 AFLQLPMLTDTIPKILRKTKMEQELKQLEKDIALVE 226
++ + + + K+ + K ++E+K EK++A+V+
Sbjct: 273 EGVEEDKV-EGVEKVQDEVKQKEEVKATEKEMAVVD 307
>SB_18221| Best HMM Match : HHH (HMM E-Value=0.65)
Length = 324
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 145 NRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTIPK 204
N+ K+ + I A + E + +E+R+K+ K N+ +LM + +L + T
Sbjct: 3 NKSSSKS-KSITTAPEENEGANRHEEDEKREKIQKHTTNSVDLMTASIAELVSIGVTEEL 61
Query: 205 ILRKTKMEQELKQLEKDIALVESN 228
R T++ +L + + ++++ES+
Sbjct: 62 ASRLTQVRGKLNTVSEVVSVLESS 85
>SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 29.5 bits (63), Expect = 2.5
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Query: 120 KGSGEVPEYCLRPDFGRVPEYLVRRNRKIQKALEEIRLADQNKESL------CKLISEEE 173
K E E LR + + + +K Q A +E++LA+ L K ++
Sbjct: 634 KNGLEETEAMLRKLEAHIEKEITTWEQKYQAAEKELQLANSRFSDLESDLAQAKSAADTH 693
Query: 174 RQK---LLKDLKNNWELMQKAFLQLPMLTDTIPKILRKTKMEQELKQLEKDI 222
R+K L K+L KA ++ L +T+ K + ++L+QLEK++
Sbjct: 694 REKTNSLQKELAEAKLSESKALRKVSSLEETLSKAPANSNASEKLEQLEKEL 745
>SB_31304| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 171 EEERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRKTKMEQELKQLEKDIA 223
++++ K + LK E +K + +L +LT IL + ++E++ KQLEKD A
Sbjct: 289 QQQQLKEKERLKQEEEEREKEYQRL-LLTQAKAGILMERELERKRKQLEKDQA 340
>SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38)
Length = 2084
Score = 29.5 bits (63), Expect = 2.5
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 141 LVRRNRKIQKALEEIRLADQNKESLCKLISE-----EERQKLLKDLKNNWELMQKAFLQL 195
L RRNR+I+ E+ + N E K I + + K L + + +Q F +
Sbjct: 931 LERRNREIKIMAEQWKAEANNSERQRKRIESSYLNLQSQAKNLYGVDSKLNDIQSKFTET 990
Query: 196 PM-LTDTIPKILRKTKMEQELKQLEKDIALVES 227
+ + K+ + K E+E KQLE +I ++++
Sbjct: 991 EKEKSQLLDKVKKLEKSEKEFKQLEYNITVLQN 1023
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 167 KLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRKTKMEQELKQLEK 220
+L+SE + K L + N +L QK L + T I R +ME++LK+LE+
Sbjct: 1249 ELVSERSKNKELMNQNN--QLSQKVKLLEGVTTKQKKDIERVKQMEEKLKELER 1300
>SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1283
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 142 VRRNRKIQKALEEIRLAD-QNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTD 200
++R ++ Q L E+ + + Q K+ L E+ERQKLL+ L+N A + T
Sbjct: 231 LQRLQEEQLRLTELEIQEHQLKKELILKKQEQERQKLLQQLRNEPSTSVLAGITQTWTTT 290
Query: 201 TIPKILRKTKMEQEL 215
+ + T+ Q++
Sbjct: 291 PVMTVAEPTRGSQDV 305
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 159 DQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRKTKMEQELKQL 218
+Q +E ++ EEERQK LK+ + +L ++A L + K L + + EQE K
Sbjct: 177 EQQEEEERRIREEEERQKALKEERMR-KLQEEARLAAQRALEEKRK-LEEERKEQERK-- 232
Query: 219 EKDIALVE 226
EK++A +E
Sbjct: 233 EKELAELE 240
>SB_35536| Best HMM Match : zf-C2H2 (HMM E-Value=0.0069)
Length = 657
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 133 DFGRVPEYLVRRNRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAF 192
+ G V +V N + K + + K+ LCKL+SE + +++ N E Q
Sbjct: 59 EMGEVTFEVVALNEERDKLQKSAECLKEEKQELCKLLSESQE----NEVRLNQE-KQLTD 113
Query: 193 LQLPMLTDTIPKILRKTKMEQEL 215
+ L + I K+ ++ + EQ L
Sbjct: 114 ATIKKLEEMIAKLQKEKREEQTL 136
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 133 DFGRVPEYLVRRNR-KIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKA 191
D+ R R R + ++ +E+IRL ++ E K ++ +LL +L+N ++
Sbjct: 442 DYERELRAQAREERHRYREEMEKIRLVEEETEKKVKFFTDHAASELLHNLRNEQGSFYES 501
Query: 192 FLQLPMLTDTIPKILRKT 209
F L + ++ RKT
Sbjct: 502 FSTLTQWLER-GEVTRKT 518
>SB_31580| Best HMM Match : Ion_trans (HMM E-Value=0.043)
Length = 532
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 121 GSGEVPEYCLRPDFGRVPEYLVRRNRKIQKALEEIRLADQNKESLCKLISEEERQKLL 178
G G + R G VP++++RR R+ K E + +N+ KL +++ ++ L
Sbjct: 47 GDGNIRHNRARIAKGEVPQHMLRRQREFAKERERV----ENRRKFFKLRHQQQMERQL 100
>SB_5137| Best HMM Match : Phage_integrase (HMM E-Value=0.11)
Length = 834
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 118 KIKGSGEVPEYCLRPDF--GRVPEYLV--RRNRKIQKALEEIRLADQNKESLCKLISEEE 173
K+ G+G P+ + F + +++ + N QKA+ +IR+ + + EE
Sbjct: 589 KVSGAGTDPDEKVFISFTVSEMTSFMISAQLNSLWQKAVGKIRVNAASFRKAAVSVVHEE 648
Query: 174 RQKLLKDLKNNWELMQK 190
Q L KDL + W+ +++
Sbjct: 649 HQHLRKDLADLWDTIKR 665
>SB_34944| Best HMM Match : DUF1087 (HMM E-Value=6.9)
Length = 203
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/37 (35%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
Query: 136 RVPEYLVRRNRKIQKALEEIRLADQNKESLCKLISEE 172
+V + +R+ ++IQK EE++L+ + +SLC+L +E+
Sbjct: 44 KVTYWGLRQRKRIQKMTEELQLSIE--DSLCRLTAEQ 78
>SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17)
Length = 1440
Score = 28.3 bits (60), Expect = 5.8
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 149 QKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQL---PMLTDTIPKI 205
+ ALEE+R + L + I E L + LK N E++ ++ +L P+L + I K
Sbjct: 657 KNALEELRQRQKKDPKLLQFIMNCEASPLCRRLKLN-EIISTSYQRLTKYPLLLEGIGK- 714
Query: 206 LRKTKMEQELKQLEKDIALVESNPYIYIY 234
+ + +E+ I +SNP Y
Sbjct: 715 -NTPSSLPDSRDIERAIQCAKSNPSRIFY 742
>SB_45045| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 1260
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 145 NRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQK 190
N K Q ++ +L + E+L KL+ +E RQK L + N E+ K
Sbjct: 614 NEKTQAQMQVQQLQTET-ENLRKLLEDERRQKSLLEQTRNLEMESK 658
>SB_1177| Best HMM Match : PEARLI-4 (HMM E-Value=0.46)
Length = 576
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 144 RNRKIQKA--LEEIRLADQNKESLCKLISEEERQKLLKDLKNNW 185
R RKI++ + EI +E+ KL + ER++L+K +KNN+
Sbjct: 490 RQRKIERKRKIVEINKKKVAREAHEKLRRQREREELVKVIKNNY 533
>SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06)
Length = 1691
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 142 VRRNRK-IQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQL 195
+RR RK ++ AL+ I+ AD+ K + I E + K +N+W+ ++ L++
Sbjct: 184 LRRQRKEVEDALKIIQDADKRKADEIRRIFHEHEVDMDKFKRNSWQESRRQHLRV 238
>SB_8007| Best HMM Match : HisKA_3 (HMM E-Value=4.2)
Length = 178
Score = 27.9 bits (59), Expect = 7.7
Identities = 24/119 (20%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 87 NFKILNIKKAIKTKAQPVEPRLVDTRDG--HIKKIKGSGEVPEYCLRPDFGRVPEYLVRR 144
NF + K + K + L TR I+K++ + PE R+ +YL +
Sbjct: 4 NFSMFKWGKTKELKQIEILKELAATRAELQAIEKVESEAQNPEQITGNAADRLHDYLEEQ 63
Query: 145 NRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTIP 203
R I + + + L++ N + + E R + + K + + ++P+ ++T+P
Sbjct: 64 RRSISGSTKTLDLSNPNSDHPANQVKSEPR--VPHNSKRPLLPLSQTDSRVPLSSNTVP 120
>SB_770| Best HMM Match : DUF837 (HMM E-Value=1.4)
Length = 269
Score = 27.9 bits (59), Expect = 7.7
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 139 EYLVRRNRKIQKALEEI-RLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPM 197
E L R N K+++ +E+ + KES ++ EEE++KL KD+ E ++ L
Sbjct: 32 EILERDNGKLEERCDELFEEIVRMKESQREV--EEEQEKLFKDI----ETLEDENFYLRK 85
Query: 198 LTDTIPKILRKTKMEQELKQLE 219
D I ++ T + L QL+
Sbjct: 86 YVDKIQELEEMTNTSKRLDQLK 107
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.137 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,976,020
Number of Sequences: 59808
Number of extensions: 257772
Number of successful extensions: 904
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 877
Number of HSP's gapped (non-prelim): 49
length of query: 235
length of database: 16,821,457
effective HSP length: 80
effective length of query: 155
effective length of database: 12,036,817
effective search space: 1865706635
effective search space used: 1865706635
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
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