GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002111-TA|BGIBMGA002111-PA|undefined
         (235 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         33   0.006
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    27   0.63 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   3.4  
AJ973473-1|CAJ01520.1|  127|Anopheles gambiae hypothetical prote...    24   4.5  
AF437891-1|AAL84186.1|  127|Anopheles gambiae sensory appendage ...    24   4.5  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 33.5 bits (73), Expect = 0.006
 Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 6/60 (10%)

Query: 168  LISEEERQKLLKDLKNNWE---LMQKAFLQLPMLTD--TIPKILRKTKMEQELKQLEKDI 222
            L+++E R+++ +DL+  WE    +Q+   Q PML+    +  +LRKTK EQ++ Q ++ I
Sbjct: 1161 LLADEIRRQVARDLRLGWENVDELQEGQFQWPMLSFGWNLADVLRKTK-EQKIAQAQEAI 1219


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 26.6 bits (56), Expect = 0.63
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 115 HIKKIKGSGEVP-EYCLRPDFGRVPEYLVRRNRKIQKA 151
           H    +G  ++P E CL  +  RV EY  R+  K +KA
Sbjct: 132 HATACRGVRKIPFEDCLDEEVVRVQEYFKRKRAKAKKA 169


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 8/21 (38%), Positives = 17/21 (80%)

Query: 168 LISEEERQKLLKDLKNNWELM 188
           L+SEEE Q+L++++K  + ++
Sbjct: 620 LVSEEEGQRLVREMKRKFSVI 640


>AJ973473-1|CAJ01520.1|  127|Anopheles gambiae hypothetical protein
           protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 7/66 (10%)

Query: 134 FGRVPEYLVRRNRKIQKALEEIRLADQNKESLCKLISEEERQK-------LLKDLKNNWE 186
           FG   + L+ + R      E  R+     ++ C+  SE++R         L+++ K+ W+
Sbjct: 40  FGNYYKCLLDQGRCTPDGNELKRILPDALQTNCEKCSEKQRDGAIKVINYLIQNRKDQWD 99

Query: 187 LMQKAF 192
           ++QK F
Sbjct: 100 VLQKKF 105


>AF437891-1|AAL84186.1|  127|Anopheles gambiae sensory appendage
           protein protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 7/66 (10%)

Query: 134 FGRVPEYLVRRNRKIQKALEEIRLADQNKESLCKLISEEERQK-------LLKDLKNNWE 186
           FG   + L+ + R      E  R+     ++ C+  SE++R         L+++ K+ W+
Sbjct: 40  FGNYYKCLLDQGRCTPDGNELKRILPDALQTNCEKCSEKQRDGAIKVINYLIQNRKDQWD 99

Query: 187 LMQKAF 192
           ++QK F
Sbjct: 100 VLQKKF 105


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.137    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,367
Number of Sequences: 2123
Number of extensions: 8095
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 5
length of query: 235
length of database: 516,269
effective HSP length: 62
effective length of query: 173
effective length of database: 384,643
effective search space: 66543239
effective search space used: 66543239
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)