Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002111-TA|BGIBMGA002111-PA|undefined
(235 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 33 0.18
U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z70718-11|CAA94680.1| 590|Caenorhabditis elegans Hypothetical p... 31 0.72
Z68301-10|CAA92629.1| 590|Caenorhabditis elegans Hypothetical p... 31 0.72
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 31 0.72
AF067936-8|AAC19209.1| 213|Caenorhabditis elegans Synapsis in m... 31 0.72
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 30 1.3
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z29094-3|CAA82343.1| 358|Caenorhabditis elegans Hypothetical pr... 29 2.2
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 29 2.2
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 29 2.2
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 29 2.2
Z69661-6|CAA93492.4| 299|Caenorhabditis elegans Hypothetical pr... 29 2.9
U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 29 2.9
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 29 2.9
AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin p... 29 2.9
Z92831-8|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81066-7|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z70682-3|CAA94582.2| 151|Caenorhabditis elegans Hypothetical pr... 29 3.8
U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical pr... 29 3.8
AC024753-11|AAF60461.1| 369|Caenorhabditis elegans Hypothetical... 29 3.8
Z78200-4|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 28 5.1
U39645-4|AAU05592.1| 341|Caenorhabditis elegans Hypothetical pr... 28 5.1
AL117204-24|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 28 5.1
AC024090-8|AAF35422.2| 649|Caenorhabditis elegans Hypothetical ... 28 5.1
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 28 6.7
U14635-5|AAN63442.1| 464|Caenorhabditis elegans Hypothetical pr... 28 6.7
U14635-4|AAL02446.1| 459|Caenorhabditis elegans Hypothetical pr... 28 6.7
U14635-3|AAN63441.1| 491|Caenorhabditis elegans Hypothetical pr... 28 6.7
U14635-2|AAC46656.2| 522|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL110478-7|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 28 6.7
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ... 28 6.7
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ... 28 6.7
Z97628-3|CAB10727.1| 819|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z79755-12|CAB02114.1| 819|Caenorhabditis elegans Hypothetical p... 27 8.8
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 27 8.8
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 27 8.8
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 27 8.8
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 159 DQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQL-PMLTDTIPKILRKTKMEQELKQ 217
+ N+ +L L++ E +KLL W L K+F L P D I + + K +QEL
Sbjct: 119 NDNQPTLGSLVTSESERKLLAKKSKQWNLKDKSFCALFPEEADQIREEMEKMN-QQELDS 177
Query: 218 LEKDIALVES 227
+ ++ +++
Sbjct: 178 IREEETAIKN 187
>U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical
protein F59A3.2a protein.
Length = 975
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/52 (26%), Positives = 29/52 (55%)
Query: 135 GRVPEYLVRRNRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWE 186
G +P+ V + + ++++ + KE + ++ SE++ LKDL+N WE
Sbjct: 652 GDLPKKWVNAYKLTLEWNQDLKSELEKKEKMSQVTSEDQDDLFLKDLQNGWE 703
>Z70718-11|CAA94680.1| 590|Caenorhabditis elegans Hypothetical
protein W01B6.9 protein.
Length = 590
Score = 31.1 bits (67), Expect = 0.72
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 130 LRPDFGRVPEYLVRRNRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQ 189
+R D + +YL +N +++ +E+ LA E K+ E+ QK++ DLKN EL +
Sbjct: 282 IRDDIRKAKDYL-EQNLHVKQHMEK-ELAMVKSEQEEKISENEKVQKMVDDLKNKIELQK 339
Query: 190 K 190
+
Sbjct: 340 Q 340
>Z68301-10|CAA92629.1| 590|Caenorhabditis elegans Hypothetical
protein W01B6.9 protein.
Length = 590
Score = 31.1 bits (67), Expect = 0.72
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 130 LRPDFGRVPEYLVRRNRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQ 189
+R D + +YL +N +++ +E+ LA E K+ E+ QK++ DLKN EL +
Sbjct: 282 IRDDIRKAKDYL-EQNLHVKQHMEK-ELAMVKSEQEEKISENEKVQKMVDDLKNKIELQK 339
Query: 190 K 190
+
Sbjct: 340 Q 340
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 31.1 bits (67), Expect = 0.72
Identities = 30/142 (21%), Positives = 70/142 (49%), Gaps = 8/142 (5%)
Query: 89 KILNIKKAIKTKAQPVEPRLVDTRDGHIKKIKGSGEVPE-----YCLRPDFGRVPEYLVR 143
K+L K + + + +E RLV+ +D + K +K + E D ++ V+
Sbjct: 967 KLLLDKTNVDQRLRNLEERLVELQDAYDKLLKEKRLLEEKVEGLTTQLLDHEERAKHGVK 1026
Query: 144 RNRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTIP 203
+++ L E+ D N+E K E+ ++KLL +L+++ + + + ++ L + +
Sbjct: 1027 AKGRLENQLHELE-QDLNRERQYKSELEQHKRKLLAELEDSKDHLAEKMGKVEELNNQLM 1085
Query: 204 KILRKTKMEQELKQLEKDIALV 225
K R +++ +L + +++ A V
Sbjct: 1086 K--RDEELQHQLTRYDEESANV 1105
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 143 RRNRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTI 202
+ N + +K +E +R ++ E E+ RQKLL D N + ++ +L L D
Sbjct: 939 KNNDERRKQMETVRDLEEQLEQ-----EEQARQKLLLDKTNVDQRLRNLEERLVELQDAY 993
Query: 203 PKILRKTKMEQE 214
K+L++ ++ +E
Sbjct: 994 DKLLKEKRLLEE 1005
>AF067936-8|AAC19209.1| 213|Caenorhabditis elegans Synapsis in
meiosis abnormal protein2 protein.
Length = 213
Score = 31.1 bits (67), Expect = 0.72
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 151 ALEEIRLADQNKESLCKLISEEERQKLLKDLKNNW 185
AL E +L+DQ ++ KLIS E + K L + NNW
Sbjct: 116 ALAESKLSDQMEKQSKKLISLEGKTKELVEKANNW 150
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/81 (28%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 148 IQKALEEIRLADQNKESLCKLISEEERQKLLKDLK--NNWELMQKAFLQ--LPMLTDTIP 203
+ K LE+ LA Q ++ ++++E E K LK+LK N +M+K+ +Q L + D +
Sbjct: 505 LNKRLEDEALAQQQQKPKDEIVAESE--KKLKELKERNKQLVMEKSEIQRELDNINDHLD 562
Query: 204 KIL-RKTKMEQELKQLEKDIA 223
++L K + Q+ ++ ++A
Sbjct: 563 QVLVEKATVVQQRDDMQAELA 583
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 29.9 bits (64), Expect = 1.7
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 8/132 (6%)
Query: 95 KAIKTKAQPVEPRLVDTRDGHIKKIKGSGEVPEYCLRPDFGRVPEYLVRR----NRKIQK 150
K I+ + ++ +D R+ K KG G R R + ++ N+K+Q+
Sbjct: 497 KKIEFMKEEIQETHLDYREELSKLAKGGGSHEADSQRDSELRSAKKTIQEVKADNKKLQQ 556
Query: 151 ALEEIRLADQNK--ESLCKL-ISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILR 207
LEE+R +Q+K E KL E + +++ K NW ++A +L + + +
Sbjct: 557 ILEEVR-QNQSKVLEENVKLRKGMAEAIEKIEEFKRNWHSSREAGERLQLEAKENEEKVL 615
Query: 208 KTKMEQELKQLE 219
K + E + K+LE
Sbjct: 616 KVEEELQEKRLE 627
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 159 DQNKE---SLCKLISEE--ERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRKT--KM 211
D+ KE +L K +S++ E +KL K L+ EL +K + + IPK + T +
Sbjct: 2526 DETKEKIDALSKTVSQDLKETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSI 2585
Query: 212 EQELKQLEKDIALVESN 228
+++++++EK A +++N
Sbjct: 2586 DEKVQEVEKLKAEIDAN 2602
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 159 DQNKE---SLCKLISEE--ERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRKT--KM 211
D+ KE +L K +S++ E +KL K L+ EL +K + + IPK + T +
Sbjct: 2526 DETKEKIDALSKTVSQDLKETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSI 2585
Query: 212 EQELKQLEKDIALVESN 228
+++++++EK A +++N
Sbjct: 2586 DEKVQEVEKLKAEIDAN 2602
>Z29094-3|CAA82343.1| 358|Caenorhabditis elegans Hypothetical
protein C07A9.5 protein.
Length = 358
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 146 RKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFL 193
+K + L +RL DQ K+SL LI++ ++ +++DL+ LM+ ++
Sbjct: 137 KKELEMLHSLRLEDQ-KKSLMNLIAKVQKSGMIQDLEKWRSLMESRYI 183
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 159 DQNKE---SLCKLISEE--ERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRKT--KM 211
D+ KE +L K +S++ E +KL K L+ EL +K + + IPK + T +
Sbjct: 340 DETKEKIDALSKTVSQDLKETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSI 399
Query: 212 EQELKQLEKDIALVESN 228
+++++++EK A +++N
Sbjct: 400 DEKVQEVEKLKAEIDAN 416
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 159 DQNKE---SLCKLISEE--ERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRKT--KM 211
D+ KE +L K +S++ E +KL K L+ EL +K + + IPK + T +
Sbjct: 2526 DETKEKIDALSKTVSQDLKETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSI 2585
Query: 212 EQELKQLEKDIALVESN 228
+++++++EK A +++N
Sbjct: 2586 DEKVQEVEKLKAEIDAN 2602
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 159 DQNKE---SLCKLISEE--ERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRKT--KM 211
D+ KE +L K +S++ E +KL K L+ EL +K + + IPK + T +
Sbjct: 2526 DETKEKIDALSKTVSQDLKETEKLKKQLEQLTELSEKLRKRKEAVKAGIPKYSKNTLDSI 2585
Query: 212 EQELKQLEKDIALVESN 228
+++++++EK A +++N
Sbjct: 2586 DEKVQEVEKLKAEIDAN 2602
>Z69661-6|CAA93492.4| 299|Caenorhabditis elegans Hypothetical
protein F48F7.2 protein.
Length = 299
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/58 (27%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 172 EERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRK--TKMEQELKQLEKDIALVES 227
++R +KDL+NN ++++ FL L LT+ +++ +E L+Q+++ A V++
Sbjct: 197 KKRHGEIKDLENNIAMLEEIFLDLQHLTEAQDEMVTNIDNNVENGLEQVKQGSANVKT 254
>U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical
protein PAR2.4a protein.
Length = 804
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 160 QNKESLCKLI--SEEERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRKTKMEQELKQ 217
QN+E+ ++ S E+ ++ KDL +W + Q P D PK+ R EL
Sbjct: 45 QNQETETNVLEPSALEKGRVYKDLSEHWIVHQDDMPAPPHNQDATPKVTRTRFAATELGT 104
Query: 218 LEKDIALV 225
E+ +A V
Sbjct: 105 RERVMAAV 112
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 29.1 bits (62), Expect = 2.9
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 12/142 (8%)
Query: 94 KKAIKT--KAQPVEPRLVDT----RDGHIKKIKGSGEVPEYCLRPDFGRVPEYLVRRNRK 147
KK I+T KA+ E + D RD HI + K E E R ++ + R R
Sbjct: 208 KKYIETQKKAEENEEKRRDAQKAERDAHIARHK-QAEALEKEKREQEEKMKKE--DRERA 264
Query: 148 IQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQK---AFLQLPMLTDTIPK 204
QK + + E+ + + +E+R++ K K N E ++K ++ + K
Sbjct: 265 TQKDRSDHIERHRQAEARAEALEKEKREQEEKQKKENLERVEKERREHIERHRQAEARAK 324
Query: 205 ILRKTKMEQELKQLEKDIALVE 226
L K K E E KQ ++++ VE
Sbjct: 325 ALEKEKRELEEKQKKENLERVE 346
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/86 (24%), Positives = 40/86 (46%)
Query: 142 VRRNRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDT 201
V R + KA I L +++ L K I + LK E+++ ++ L +T
Sbjct: 505 VGRTARAGKAGRSISLVGEDERKLLKEIVNSNADRTLKQRLVAPEVVEAYRRRIDELEET 564
Query: 202 IPKILRKTKMEQELKQLEKDIALVES 227
I +I + + E+EL+ E +A ++
Sbjct: 565 IQQIDEEDRAEKELRIAEASMAKTQN 590
>AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin
polymerizing factor protein.
Length = 804
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 160 QNKESLCKLI--SEEERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRKTKMEQELKQ 217
QN+E+ ++ S E+ ++ KDL +W + Q P D PK+ R EL
Sbjct: 45 QNQETETNVLEPSALEKGRVYKDLSEHWIVHQDDMPAPPHNQDATPKVTRTRFAATELGT 104
Query: 218 LEKDIALV 225
E+ +A V
Sbjct: 105 RERVMAAV 112
>Z92831-8|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/41 (29%), Positives = 27/41 (65%)
Query: 177 LLKDLKNNWELMQKAFLQLPMLTDTIPKILRKTKMEQELKQ 217
L+++L++ E + + +LQL +LTD + K + +T ++L +
Sbjct: 1128 LMRELQSEPEQLAQLYLQLWVLTDAVIKSMAQTMCSEQLNK 1168
>Z81066-7|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/41 (29%), Positives = 27/41 (65%)
Query: 177 LLKDLKNNWELMQKAFLQLPMLTDTIPKILRKTKMEQELKQ 217
L+++L++ E + + +LQL +LTD + K + +T ++L +
Sbjct: 1128 LMRELQSEPEQLAQLYLQLWVLTDAVIKSMAQTMCSEQLNK 1168
>Z70682-3|CAA94582.2| 151|Caenorhabditis elegans Hypothetical
protein F08G5.3a protein.
Length = 151
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 132 PDFGRVPEYLVRRNRKIQKALEEIRLADQNKESLCKLISEEER----QKLLKDLKNNWEL 187
P+F YL +R ++K +R E + +L ++EE QKLL ++K +L
Sbjct: 2 PEFQERLTYLDKRYDHLRKMTHSLRKKVNELEDIMRLDNDEENMDTIQKLLDEIKREKQL 61
Query: 188 MQ 189
M+
Sbjct: 62 MR 63
>U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical
protein F59C12.3 protein.
Length = 519
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/64 (25%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 139 EYLVRRNRKIQKALEEIRLADQNKESLCKLISEEERQ-KLLKDLKNNWELMQKAFLQLPM 197
E L +R +K ++ + AD+ ++ L ++ E+ R+ ++++ + WE M+K L++ +
Sbjct: 272 ERLAKREKKCEELSAVVAHADELRKQLNEVWEEQHRRDQMVESERAQWE-MEKTQLRMQL 330
Query: 198 LTDT 201
DT
Sbjct: 331 NKDT 334
>AC024753-11|AAF60461.1| 369|Caenorhabditis elegans Hypothetical
protein Y23H5B.1 protein.
Length = 369
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 144 RNRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTIP 203
RN ++ E RL+D L K+I + Q LK+L+ + F + DTI
Sbjct: 123 RNHVLEPGSSECRLSDNEFSKLEKIIDAKCGQSALKNLQLHSNFQYVEFRTCELTEDTIR 182
Query: 204 KILR 207
I +
Sbjct: 183 DIFK 186
>Z78200-4|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4 protein.
Length = 1298
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 153 EEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRKTKME 212
E+++L + ++ K+ + +KDL E ++K+ LP+L D K K E
Sbjct: 436 EKVKLEKEVEQLKFKIKQGQNATAGMKDLLKKEEALRKSLADLPLL-DENALTECKLKRE 494
Query: 213 QELKQLE 219
+ LKQL+
Sbjct: 495 KYLKQLD 501
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 141 LVRRNRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDL 181
L+++ ++K+L ++ L D+N + CKL +R+K LK L
Sbjct: 464 LLKKEEALRKSLADLPLLDENALTECKL----KREKYLKQL 500
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 153 EEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRKTKME 212
E+++L + ++ K+ + +KDL E ++K+ LP+L D K K E
Sbjct: 436 EKVKLEKEVEQLKFKIKQGQNATAGMKDLLKKEEALRKSLADLPLL-DENALTECKLKRE 494
Query: 213 QELKQLE 219
+ LKQL+
Sbjct: 495 KYLKQLD 501
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 141 LVRRNRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDL 181
L+++ ++K+L ++ L D+N + CKL +R+K LK L
Sbjct: 464 LLKKEEALRKSLADLPLLDENALTECKL----KREKYLKQL 500
>U39645-4|AAU05592.1| 341|Caenorhabditis elegans Hypothetical
protein C14F11.4b protein.
Length = 341
Score = 28.3 bits (60), Expect = 5.1
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 139 EY-LVRRNRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPM 197
EY L + N+K+ + +E +R K S I + RQ+ + K+ + + K +L
Sbjct: 62 EYQLSKINKKLDRIIEILRSPSTKKTSQEPPIIDVARQEQTRQYKDICDRLDKLEAELTF 121
Query: 198 LTDTIPKILRKTKMEQELKQLEKD--IALVESN 228
+ +I T EL Q+++ + LV SN
Sbjct: 122 VAPLQNEISLLTNKVHELAQIQEGLRVKLVSSN 154
>AL117204-24|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 139 EYLVRRNRKIQKALEEIRLADQNKESLC-----KLISEEERQKLLKDLKNNWELMQKAFL 193
E V RK + +EEI + + E + K + EE+ +K DL N W Q +
Sbjct: 93 EVFVEMERKYGE-VEEINVCENIGEHMVGNVYVKFMKEEDAEKAKNDLNNRWFNGQPIYA 151
Query: 194 QLPMLTD 200
+L +TD
Sbjct: 152 ELCPVTD 158
>AC024090-8|AAF35422.2| 649|Caenorhabditis elegans Hypothetical
protein C52E2.8 protein.
Length = 649
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 185 WELMQKAFLQLPMLTDTIPKILRKTKMEQE-LKQLEKDIALVESNPY 230
W+++ FL D I K R K++QE Q++ DI ++ S Y
Sbjct: 307 WKILDHNFLSNARPLDEIEKRFRNAKIDQENYDQMKLDIGIITSLVY 353
>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
protein F59A6.5 protein.
Length = 1286
Score = 27.9 bits (59), Expect = 6.7
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 5/132 (3%)
Query: 97 IKTKAQPVEPRLVDTRDGHIKKIKGSGEVPEYCLRPDFGRVPEYLVRRNRKIQKALEEIR 156
+K Q V+ LV+ R H +KI + ++ EY R + Q+ E +
Sbjct: 562 VKADNQKVQLMLVEVRQ-HQEKILEENVRLRKGMADALAKIEEYK-RSWQNSQETCERLE 619
Query: 157 LADQNKES-LCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRKTKMEQEL 215
KE L KL EEE Q+ + + + EL+ Q+ PK+ R++ + +
Sbjct: 620 RESATKEDKLDKL--EEELQEKKQQIAESKELVTYLHSQIDAKQTKQPKLGRRSTLLSTV 677
Query: 216 KQLEKDIALVES 227
+++ + + E+
Sbjct: 678 SEMDTSVYMREA 689
>U14635-5|AAN63442.1| 464|Caenorhabditis elegans Hypothetical
protein C27H5.2d protein.
Length = 464
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 172 EERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRK-----TKMEQELKQLEKDIALVE 226
EER ++LK +++ FL L ++ +I+ TKM + L+ LEK++ E
Sbjct: 157 EERSQMLKTAGRELSPLEQQFLDLCRISTAKDQIIDANRQEITKMNETLRILEKNLKETE 216
Query: 227 SN 228
+N
Sbjct: 217 TN 218
>U14635-4|AAL02446.1| 459|Caenorhabditis elegans Hypothetical
protein C27H5.2b protein.
Length = 459
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 172 EERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRK-----TKMEQELKQLEKDIALVE 226
EER ++LK +++ FL L ++ +I+ TKM + L+ LEK++ E
Sbjct: 157 EERSQMLKTAGRELSPLEQQFLDLCRISTAKDQIIDANRQEITKMNETLRILEKNLKETE 216
Query: 227 SN 228
+N
Sbjct: 217 TN 218
>U14635-3|AAN63441.1| 491|Caenorhabditis elegans Hypothetical
protein C27H5.2c protein.
Length = 491
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 172 EERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRK-----TKMEQELKQLEKDIALVE 226
EER ++LK +++ FL L ++ +I+ TKM + L+ LEK++ E
Sbjct: 157 EERSQMLKTAGRELSPLEQQFLDLCRISTAKDQIIDANRQEITKMNETLRILEKNLKETE 216
Query: 227 SN 228
+N
Sbjct: 217 TN 218
>U14635-2|AAC46656.2| 522|Caenorhabditis elegans Hypothetical
protein C27H5.2a protein.
Length = 522
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 172 EERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRK-----TKMEQELKQLEKDIALVE 226
EER ++LK +++ FL L ++ +I+ TKM + L+ LEK++ E
Sbjct: 157 EERSQMLKTAGRELSPLEQQFLDLCRISTAKDQIIDANRQEITKMNETLRILEKNLKETE 216
Query: 227 SN 228
+N
Sbjct: 217 TN 218
>AL110478-7|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 143 RRNRKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTI 202
+RN++I + EEI+ +Q +E K I+++ ++ + L+ E+ Q+ + ++ D
Sbjct: 214 KRNQEILRREEEIKQQNQERE---KQINDDFEKRKQEKLQREEEMKQQNQEREKLIADDF 270
Query: 203 PKILRKTKMEQELKQLEKD 221
K RK + Q K EK+
Sbjct: 271 EK--RKLEKLQREKLFEKN 287
>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
protein Y47D3B.5b protein.
Length = 1136
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/66 (25%), Positives = 35/66 (53%)
Query: 162 KESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRKTKMEQELKQLEKD 221
+E LC++I + + + + KD + E +++ F P+L+ PKI+ + ++K
Sbjct: 422 EEWLCRMIEQIKEEYMKKDGLVDPEEIKRIFANDPVLSFVAPKIMSGEQNHMLKDTIKKF 481
Query: 222 IALVES 227
L+ES
Sbjct: 482 DRLLES 487
>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
protein Y47D3B.5a protein.
Length = 1088
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/66 (25%), Positives = 35/66 (53%)
Query: 162 KESLCKLISEEERQKLLKDLKNNWELMQKAFLQLPMLTDTIPKILRKTKMEQELKQLEKD 221
+E LC++I + + + + KD + E +++ F P+L+ PKI+ + ++K
Sbjct: 422 EEWLCRMIEQIKEEYMKKDGLVDPEEIKRIFANDPVLSFVAPKIMSGEQNHMLKDTIKKF 481
Query: 222 IALVES 227
L+ES
Sbjct: 482 DRLLES 487
>Z97628-3|CAB10727.1| 819|Caenorhabditis elegans Hypothetical
protein F43G9.12 protein.
Length = 819
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 147 KIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLP 196
KI+ L +++L Q ++ EE+R KL ++++ N ++ K ++LP
Sbjct: 336 KIEDILAKLKLRIQERDEALNFRKEEKR-KLEQNIEENKSMIAKIEMELP 384
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 147 KIQKALEEIRLADQNKE-SLCKLISEEERQKLLKDLKNNWELMQKAF 192
K Q ++ E R+AD N CK+ + E R +L K ++ NWE ++ F
Sbjct: 924 KKQISILEKRIADSNSSLEECKIQNAELRDQLAK-VQANWEKDKEVF 969
>Z79755-12|CAB02114.1| 819|Caenorhabditis elegans Hypothetical
protein F43G9.12 protein.
Length = 819
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 147 KIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFLQLP 196
KI+ L +++L Q ++ EE+R KL ++++ N ++ K ++LP
Sbjct: 336 KIEDILAKLKLRIQERDEALNFRKEEKR-KLEQNIEENKSMIAKIEMELP 384
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 147 KIQKALEEIRLADQNKE-SLCKLISEEERQKLLKDLKNNWELMQKAF 192
K Q ++ E R+AD N CK+ + E R +L K ++ NWE ++ F
Sbjct: 924 KKQISILEKRIADSNSSLEECKIQNAELRDQLAK-VQANWEKDKEVF 969
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 147 KIQKALEEIRLADQNKE-SLCKLISEEERQKLLKDLKNNWELMQKAF 192
K Q ++ E R+AD N CK+ + E R +L K ++ NWE ++ F
Sbjct: 924 KKQISILEKRIADSNSSLEECKIQNAELRDQLAK-VQANWEKDKEVF 969
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical protein
C50C3.2 protein.
Length = 2107
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 146 RKIQKALEEIRLADQNKESLCKLISEEERQKLLKDLKNNWELMQKAFL 193
+K + L ++L DQ K+SL LI + +++ +++DL+ LM+ ++
Sbjct: 1883 KKELEILYSLKLEDQ-KKSLINLIDKVQKRGMIQDLEKWRSLMESRYI 1929
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.137 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,242,113
Number of Sequences: 27539
Number of extensions: 201674
Number of successful extensions: 831
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 801
Number of HSP's gapped (non-prelim): 67
length of query: 235
length of database: 12,573,161
effective HSP length: 79
effective length of query: 156
effective length of database: 10,397,580
effective search space: 1622022480
effective search space used: 1622022480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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