Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002110-TA|BGIBMGA002110-PA|undefined
(215 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55606| Best HMM Match : TPR_2 (HMM E-Value=8.3e-08) 40 0.002
SB_48386| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_5851| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.55
SB_12316| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_40332| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_48087| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_56583| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6) 29 2.2
SB_28333| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_27687| Best HMM Match : zf-B_box (HMM E-Value=6.7e-10) 29 2.2
SB_24941| Best HMM Match : DPRP (HMM E-Value=1) 29 2.2
SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_10659| Best HMM Match : PAPA-1 (HMM E-Value=0.75) 29 2.2
SB_7036| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6) 29 2.2
SB_50090| Best HMM Match : SPC22 (HMM E-Value=2.8) 29 2.2
SB_47792| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6) 29 2.2
SB_46702| Best HMM Match : LETM1 (HMM E-Value=5.5) 29 2.2
SB_41734| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_29550| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_25362| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6) 29 2.2
SB_24134| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6) 29 2.2
SB_19159| Best HMM Match : RVT_1 (HMM E-Value=0.00032) 29 2.2
SB_18732| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13) 29 2.2
SB_13171| Best HMM Match : AT_hook (HMM E-Value=6.4) 29 2.2
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 29 2.9
SB_41737| Best HMM Match : zf-B_box (HMM E-Value=2.3e-10) 29 2.9
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_19380| Best HMM Match : DUF827 (HMM E-Value=0.06) 29 3.9
SB_31781| Best HMM Match : Enterotoxin_HS (HMM E-Value=6.1) 29 3.9
SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 29 3.9
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_54597| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 28 5.1
SB_46744| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 28 5.1
SB_53400| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_3815| Best HMM Match : zf-MYND (HMM E-Value=1.3e-11) 28 6.8
SB_29357| Best HMM Match : LRR_1 (HMM E-Value=0.00026) 27 9.0
SB_25230| Best HMM Match : NACHT (HMM E-Value=0.0015) 27 9.0
>SB_55606| Best HMM Match : TPR_2 (HMM E-Value=8.3e-08)
Length = 771
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 7 VFNCYGPHRSRETTAQRRAQLRAQYMFNCMCTAC 40
+ +CYGPH + +R+ L QY F C C+AC
Sbjct: 641 ITHCYGPHVNHMPREERQKLLYKQYFFTCQCSAC 674
>SB_48386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 717
Score = 33.5 bits (73), Expect = 0.14
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 82 IDRALSAIEKAEDLMDQAERAATV-EERFEKAHAAYKMKQQVWHRHHTSLRAAADRLARI 140
++ ALS +K ED+ +QA+ A +ER EK A + ++++ ++L L
Sbjct: 390 LETALSDNKKLEDMTEQAKAALKENKERLEKQTAEFSEEKELLKTQVSNLEGILKNL--- 446
Query: 141 YADSGEFSRSVELIKQNIQSLEYQFGSFSVEGMVSRSPQDNKE 183
D E RS + + SL +F + +E R+ +D KE
Sbjct: 447 -RDDKE--RSEQHFVSELDSLRSRFDNLCMEQNAKRAIEDKKE 486
>SB_5851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 31.5 bits (68), Expect = 0.55
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 95 LMDQAERAATVEERFEKAHAAY-KMKQQVWHRHHTSLRAAADRLARIYADSGEFSRSVEL 153
+ D A + R KA A Y K+++++W HH SL+ + + +
Sbjct: 11 ISDNARIDNEITFRKGKASATYAKLRERLWDNHHVSLKVKGKVYRAVVLSALVYGAETWT 70
Query: 154 IKQNIQS-LEYQFGSFSVEGMVSRSPQDNKEI 184
+ ++ +S +++FGS V +R P E+
Sbjct: 71 VYRSQESEQDHKFGSEMVNMTKNRLPHHKFEV 102
>SB_12316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 30.7 bits (66), Expect = 0.96
Identities = 22/97 (22%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 89 IEKAEDLMDQAERAATVE-ERFEKAHAAYKMKQQVWHRHHTSLRAAADRLARIYADSGEF 147
++K +DL+ ++E A ++ + F++ + K V+ + LA + A+ G
Sbjct: 376 LQKKKDLLKESEGAEVLKGDEFKRYVNKLRGKSTVYKKKR-------QELAELRAEYGVL 428
Query: 148 SRSVELIKQNIQSLEYQFGSFSVEGMVSRSPQDNKEI 184
SRSVE++K ++L Q + V+ + +E+
Sbjct: 429 SRSVEILKTKDENLNQQLAGIEAKQGVTGYHETQEEL 465
>SB_40332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 95 LMDQAERAATVEERFEKAHAAY-KMKQQVWHRHHTSLRAAADRLARIYADSGEFSRSVEL 153
+ D A + R KA AAY K+++++W HH SL+ R + Y + ++L
Sbjct: 208 ISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVSLKFKNFRQSYYYFTLAIMAERIDL 267
>SB_48087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 29.9 bits (64), Expect = 1.7
Identities = 31/150 (20%), Positives = 63/150 (42%), Gaps = 4/150 (2%)
Query: 67 CGKRALCQQCHAELQI-DRALSAIEKAEDLMDQAERAATV--EERFEKAHAAYKMKQQVW 123
C + L ++ +EL + D + +A ++ +A R+ ++R E+ AA ++
Sbjct: 1120 CTSKKLLEKNFSELTLTDTEQRELYQAALIIQEAYRSYKTRRQQREEELQAAILIQNHYR 1179
Query: 124 HRHHTSLRAAADRLARIYADSGEFSRSVELIKQNIQSLEYQFGSFSVEGMVSRSPQDNKE 183
++ + A I + R E K++ ++ F + R Q ++
Sbjct: 1180 RYKQYAVLKKMTQAALIIQNQYRAYREHEQFKKSRRAAAIIQNHFRIYRK-RRQSQKRRD 1238
Query: 184 IYTTDGLELRFLRAAGQEAQRAGIDSGFTP 213
Y + E RF+R A +QR ID+ +P
Sbjct: 1239 EYKSKQQEARFMRQASNRSQRVRIDNHLSP 1268
>SB_56583| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6)
Length = 234
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 95 LMDQAERAATVEERFEKAHAAY-KMKQQVWHRHHTSLR 131
+ D A + R KA AAY K+++++W HH SL+
Sbjct: 79 ISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVSLK 116
>SB_28333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 95 LMDQAERAATVEERFEKAHAAY-KMKQQVWHRHHTSLR 131
+ D A + R KA AAY K+++++W HH SL+
Sbjct: 121 ISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVSLK 158
>SB_27687| Best HMM Match : zf-B_box (HMM E-Value=6.7e-10)
Length = 237
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 36 MCTACLDTDRKDFVSLFTEYACQTCKGPVLWCGKRALCQQCHAELQIDRALSAIEKAEDL 95
+C C D K+ LFT K +L K+ + I++A++ +EKA+
Sbjct: 26 ICRDCTVVDHKNHDYLFTSDVIAREKEEILERAKKVTSKLT----DIEQAMALVEKAQQH 81
Query: 96 MDQAERAA 103
+D+ +RAA
Sbjct: 82 LDENKRAA 89
>SB_24941| Best HMM Match : DPRP (HMM E-Value=1)
Length = 354
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 95 LMDQAERAATVEERFEKAHAAY-KMKQQVWHRHHTSLR 131
+ D A + R KA AAY K+++++W HH SL+
Sbjct: 121 ISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVSLK 158
>SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 36 MCTACLDTDRKDFVSLFTEYACQTCKGPVLWCGKRALCQQCHAELQIDRALSAIEKAEDL 95
+C C D K+ LFT K +L K+ + I++A++ +EKA+
Sbjct: 176 ICRDCTVVDHKNHDYLFTSDVIAREKEEILERAKKVTSKLT----DIEQAMALVEKAQQH 231
Query: 96 MDQAERAA 103
+D+ +RAA
Sbjct: 232 LDENKRAA 239
>SB_10659| Best HMM Match : PAPA-1 (HMM E-Value=0.75)
Length = 498
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 95 LMDQAERAATVEERFEKAHAAY-KMKQQVWHRHHTSLR 131
+ D A + R KA AAY K+++++W HH SL+
Sbjct: 434 ISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVSLK 471
>SB_7036| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6)
Length = 268
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 95 LMDQAERAATVEERFEKAHAAY-KMKQQVWHRHHTSLR 131
+ D A + R KA AAY K+++++W HH SL+
Sbjct: 204 ISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVSLK 241
>SB_50090| Best HMM Match : SPC22 (HMM E-Value=2.8)
Length = 268
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 95 LMDQAERAATVEERFEKAHAAY-KMKQQVWHRHHTSLR 131
+ D A + R KA AAY K+++++W HH SL+
Sbjct: 204 ISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVSLK 241
>SB_47792| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6)
Length = 255
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 95 LMDQAERAATVEERFEKAHAAY-KMKQQVWHRHHTSLR 131
+ D A + R KA AAY K+++++W HH SL+
Sbjct: 70 ISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVSLK 107
>SB_46702| Best HMM Match : LETM1 (HMM E-Value=5.5)
Length = 306
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 95 LMDQAERAATVEERFEKAHAAY-KMKQQVWHRHHTSLR 131
+ D A + R KA AAY K+++++W HH SL+
Sbjct: 121 ISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVSLK 158
>SB_41734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 95 LMDQAERAATVEERFEKAHAAY-KMKQQVWHRHHTSLR 131
+ D A + R KA AAY K+++++W HH SL+
Sbjct: 99 ISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVSLK 136
>SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 667
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 36 MCTACLDTDRKDFVSLFTEYACQTCKGPVLWCGKRALCQQCHAELQIDRALSAIEKAEDL 95
+C C D K+ LFT K +L K+ + I++A++ +EKA+
Sbjct: 181 ICRDCTVVDHKNHDYLFTSDVIAREKEEILERAKKVTSKLT----DIEQAMALVEKAQQH 236
Query: 96 MDQAERAA 103
+D+ +RAA
Sbjct: 237 LDENKRAA 244
>SB_29550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 95 LMDQAERAATVEERFEKAHAAY-KMKQQVWHRHHTSLR 131
+ D A + R KA AAY K+++++W HH SL+
Sbjct: 313 ISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVSLK 350
>SB_25362| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6)
Length = 185
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 95 LMDQAERAATVEERFEKAHAAY-KMKQQVWHRHHTSLR 131
+ D A + R KA AAY K+++++W HH SL+
Sbjct: 121 ISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVSLK 158
>SB_24134| Best HMM Match : RNA_pol_Rpb7_N (HMM E-Value=5.6)
Length = 268
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 95 LMDQAERAATVEERFEKAHAAY-KMKQQVWHRHHTSLR 131
+ D A + R KA AAY K+++++W HH SL+
Sbjct: 204 ISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVSLK 241
>SB_19159| Best HMM Match : RVT_1 (HMM E-Value=0.00032)
Length = 426
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 95 LMDQAERAATVEERFEKAHAAY-KMKQQVWHRHHTSLR 131
+ D A + R KA AAY K+++++W HH SL+
Sbjct: 241 ISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVSLK 278
>SB_18732| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13)
Length = 1582
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 95 LMDQAERAATVEERFEKAHAAY-KMKQQVWHRHHTSLR 131
+ D A + R KA AAY K+++++W HH SL+
Sbjct: 1431 ISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVSLK 1468
>SB_13171| Best HMM Match : AT_hook (HMM E-Value=6.4)
Length = 188
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 95 LMDQAERAATVEERFEKAHAAY-KMKQQVWHRHHTSLR 131
+ D A + R KA AAY K+++++W HH SL+
Sbjct: 3 ISDNARIDNEITFRKGKASAAYAKLRERLWDNHHVSLK 40
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 74 QQCHAELQIDRALSAIEKAEDLMDQAERAATVEERFEKAHAAY---KMKQQVWHRHHTSL 130
Q+ HAEL+ + L+ +E ++ +D ++ +E EK HA + KQ++ H L
Sbjct: 1244 QRMHAELEQAKELARLELEQEHLDNLQQ---LESSLEKRHAEQLRAQAKQELEEAHQKEL 1300
Query: 131 RAAADRL 137
+++ L
Sbjct: 1301 QSSLSAL 1307
>SB_41737| Best HMM Match : zf-B_box (HMM E-Value=2.3e-10)
Length = 511
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 36 MCTACLDTDRKDFVSLFTEYACQTCKGPVLWCGKRALCQQCHAELQIDRALSAIEKAEDL 95
+C C D K+ LFT K +L K+ + I++A++ +EKA+
Sbjct: 26 ICRDCTVVDHKNHDYLFTSDVIAREKEEILERAKKVTSKLT----DIEQAMAFVEKAQQH 81
Query: 96 MDQAERAA 103
+D+ +RAA
Sbjct: 82 LDENKRAA 89
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 86 LSAIEKAEDLMDQAERAATVEERFEKAHAAYK-----MKQQVWHRHHTSLRAAADRLARI 140
L ++K ED + ER T+++ EK A + +KQ++ + S R A+R+ +I
Sbjct: 1806 LQMMKKKEDSLH--ERIQTLQDDVEKLKAVNRDREQTLKQELNKQMSESQRKDAERIEQI 1863
Query: 141 YADSGEFSRSVELIK-QNIQSLE 162
+ EF R + ++ Q+++ +E
Sbjct: 1864 IHNKSEFDRKLHQLQCQHMEQVE 1886
>SB_19380| Best HMM Match : DUF827 (HMM E-Value=0.06)
Length = 241
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/67 (22%), Positives = 30/67 (44%)
Query: 93 EDLMDQAERAATVEERFEKAHAAYKMKQQVWHRHHTSLRAAADRLARIYADSGEFSRSVE 152
E++ ++ VEE F KA AY + + R H+ + + LA + + +E
Sbjct: 122 ENIEEEESGFKAVEEEFNKATEAYNNQNIQYTRQHSKIESLKQELAFRSNQLDDLIKQIE 181
Query: 153 LIKQNIQ 159
K+ ++
Sbjct: 182 TNKEQLK 188
>SB_31781| Best HMM Match : Enterotoxin_HS (HMM E-Value=6.1)
Length = 88
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 149 RSVELIKQNIQSLEYQFGSFSVEGMVSRSPQDNKE 183
R V + N Q L GSFS+E +++++ D +E
Sbjct: 5 RDVTSVDDNFQPLHSVLGSFSIESILNKATLDTQE 39
>SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 463
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 36 MCTACLDTDRKDFVSLFTEYACQTCKGPVLWCGKRALCQQCHAELQIDRALSAIEKAEDL 95
+C C D K+ LFT K +L K+ + I++A++ +EKA+
Sbjct: 176 ICRDCTVVDHKNHDYLFTSDVIAREKEEILERAKKVTSKLTG----IEQAMALVEKAQQH 231
Query: 96 MDQAERAA 103
+D+ +RAA
Sbjct: 232 LDENKRAA 239
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 28.7 bits (61), Expect = 3.9
Identities = 23/107 (21%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 81 QIDRALSAIEKAEDLMDQAERAATVEERFEKAHAAYKMKQQVWHRHHTSLRAAADRLARI 140
+++ A++ ++K ++++D+ E+ V++ EK K++++ +H L D+ ++
Sbjct: 941 EMELAIAELQKEKEMVDE-EQDRKVKDA-EKDLEEVKLERR---KHQEELETLKDKTLKV 995
Query: 141 YADSGEFSRSVELIKQNIQSLEYQFGSFSVEGMVSRSPQDNKEIYTT 187
+ + + E IK NI++ + S+E V +D K + TT
Sbjct: 996 ERELRDSQQ--ENIKMNIENSKLSRKVSSLESSVEIFEKDKKNLRTT 1040
>SB_54597| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 755
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 36 MCTACLDTDRKDFVSLFTEYACQTCKGPVLWCGKRALCQQCHAELQIDRALSAIEKAEDL 95
+C C D K+ LFT K +L K+ + I++A++ +EKA+
Sbjct: 114 ICRDCTVVDHKNHDYLFTSDVIAREKEEILERAKKVTSKLTG----IEQAMALLEKAQQH 169
Query: 96 MDQAERAA 103
+D+ +RAA
Sbjct: 170 LDENKRAA 177
>SB_46744| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 134 ADRLARIYADSGEFSRSVELIKQNIQSLEYQFGSFSVEGMVSRSPQDNKEI 184
A +LA + A+ G SRSVE++K ++L Q + V+ + +E+
Sbjct: 20 AFQLAELRAEYGVLSRSVEILKTKDENLNQQLAGIEAKQGVTGYHETQEEL 70
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 14/69 (20%)
Query: 52 FTEYACQTCKGPVLWCGKRALCQQCHAELQ--------IDRALSAIEKAEDLMDQAERAA 103
F EY Q+ W KR C C +Q +D A++ + + D+ + R A
Sbjct: 390 FCEYCLQS------WLRKRNTCPICRCAVQSQPVRSIVLDNAIAKMVDSMDVASKERRRA 443
Query: 104 TVEERFEKA 112
+EER EK+
Sbjct: 444 VMEERAEKS 452
>SB_53400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1130
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 6/60 (10%)
Query: 21 AQRRAQLRAQYM-FNCMCTACLDTDRKDFVSLFTEYACQTCKGPVLWCGKRALCQQCHAE 79
AQ + R YM FNC T + RK + A CK WC K A CH +
Sbjct: 758 AQGYCEKRKTYMQFNCRKTCGMCGTRKSL-----KPAMPVCKDRTSWCRKWASYGYCHTK 812
>SB_3815| Best HMM Match : zf-MYND (HMM E-Value=1.3e-11)
Length = 281
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 1 MPVATEVFNCYGPH-RSRETTAQRRAQLRAQYMFNCMCTACLDTDRKDFVSLFTEYAC 57
+PV E+ Y RET R+ +L+ Q+ F C C CLD D + T C
Sbjct: 216 IPVGEELTISYIQQLHPRET---RQEELQTQFCFYCQCHRCLDA--SDNNKMLTSLIC 268
>SB_29357| Best HMM Match : LRR_1 (HMM E-Value=0.00026)
Length = 521
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 81 QIDRALSAIEKAEDLMDQAERAATV-EERFEKAHAAYKMKQQV 122
Q+D +AI ED+ R AT+ +E EK AA K Q +
Sbjct: 158 QVDELAAAITTKEDVTSITLRNATIDDEAIEKLAAALKTTQSI 200
>SB_25230| Best HMM Match : NACHT (HMM E-Value=0.0015)
Length = 1238
Score = 27.5 bits (58), Expect = 9.0
Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 75 QCHAELQIDRALSAIEKAEDLMDQAERAATVEERFEKAHAAYKMKQQVWHRHHTSLRAAA 134
+C + ++ L + + + DL+ +RA + A YK QV + L A
Sbjct: 926 RCLLDWEVFSRLYSEDFSIDLLRSWQRAGG----YSSAALLYKEALQVLKKDEVPLEDYA 981
Query: 135 DRLARIY---ADSGEFSRSVELIKQNIQSLEYQFGS 167
++ + +G++S S E++K+ ++ E Q G+
Sbjct: 982 HKMEMVINFLIQAGQYSESYEMLKERLEIEEKQLGA 1017
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.131 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,629,209
Number of Sequences: 59808
Number of extensions: 234129
Number of successful extensions: 628
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 618
Number of HSP's gapped (non-prelim): 41
length of query: 215
length of database: 16,821,457
effective HSP length: 79
effective length of query: 136
effective length of database: 12,096,625
effective search space: 1645141000
effective search space used: 1645141000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 58 (27.5 bits)
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