GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002110-TA|BGIBMGA002110-PA|undefined
         (215 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   5.1  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   5.1  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    22   5.1  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   8.8  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   8.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   8.8  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/47 (23%), Positives = 21/47 (44%)

Query: 117 KMKQQVWHRHHTSLRAAADRLARIYADSGEFSRSVELIKQNIQSLEY 163
           K K  ++  H +++ +    L   Y    E+S S+ +   NI+   Y
Sbjct: 248 KRKIYLFSGHESNIASVLHALQLYYPHVPEYSSSIIMELHNIEGTHY 294


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/47 (23%), Positives = 21/47 (44%)

Query: 117 KMKQQVWHRHHTSLRAAADRLARIYADSGEFSRSVELIKQNIQSLEY 163
           K K  ++  H +++ +    L   Y    E+S S+ +   NI+   Y
Sbjct: 263 KRKIYLFSGHESNIASVLHALQLYYPHVPEYSSSIIMELHNIEGTHY 309


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 96  MDQAERAATVEERFEKAHAAYKMKQQ 121
           + +AE     ++R +KA A YK +Q+
Sbjct: 129 LTEAEEEVLNKKRSKKAEAKYKARQR 154


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)

Query: 77  HAELQIDRALSAIEKAEDLMDQ 98
           H+++ I+R L A ++ E  M+Q
Sbjct: 202 HSDMPIERILEAEKRVECKMEQ 223


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)

Query: 77  HAELQIDRALSAIEKAEDLMDQ 98
           H+++ I+R L A ++ E  M+Q
Sbjct: 202 HSDMPIERILEAEKRVECKMEQ 223


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 122 VWHRHHTSLRAAADRLARIYADSGEFSRSVELI 154
           VW R+   L    +   R++ D   +   V+LI
Sbjct: 343 VWRRNGADLETLNEPEIRVFNDGSLYLTKVQLI 375


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.131    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,992
Number of Sequences: 429
Number of extensions: 1800
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 215
length of database: 140,377
effective HSP length: 55
effective length of query: 160
effective length of database: 116,782
effective search space: 18685120
effective search space used: 18685120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 42 (21.0 bits)