GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002109-TA|BGIBMGA002109-PA|IPR008940|Protein
prenyltransferase
         (357 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK095369-1|BAC04538.1|  804|Homo sapiens protein ( Homo sapiens ...    79   3e-14
BC035077-1|AAH35077.1|  804|Homo sapiens SET and MYND domain con...    77   7e-14
AB067523-1|BAB67829.1|  558|Homo sapiens KIAA1936 protein protein.     46   2e-04

>AK095369-1|BAC04538.1|  804|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38050 fis, clone CTONG2014369. ).
          Length = 804

 Score = 78.6 bits (185), Expect = 3e-14
 Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 30/214 (14%)

Query: 20  EDCLSDIKLAISNGYPSELRHKLLLRRADCLIELCRTVAAREALIEAKQH-AATLKLSMS 78
           E CL DI +A ++GYP  L+ K++LR+A+CL+ L R   A + + + +++  AT  L+  
Sbjct: 123 ETCLKDINIAQTHGYPERLQPKIMLRKAECLVALGRLQEASQTISDLERNFTATPALADV 182

Query: 79  HKGEFDRHLCDLEKKLE----VVKDVDRSEEDEIPDFYM-GENEEYVSASNALQLKRSKA 133
                 R+L  L+ K++    + +    +    + D  +  ENE+  +AS+++ L     
Sbjct: 183 LPQTLQRNLHRLKMKMQEKDSLTESFPAALAKTLEDAALREENEQLSNASSSIGLCVDPL 242

Query: 134 AGRHVVTKKATKRGDVIFSEEPYACVTLPNE-----------------GGRLVCETCCRT 176
            GR +V  K    G+++  E+ +  V  P E                  G L C  C + 
Sbjct: 243 KGRCLVATKDILPGELLVQEDAFVSVLNPGELPPPHHGLDSKWDTRVTNGDLYCHRCLKH 302

Query: 177 DINTVPC-------YCSETCREHGLHTFHRWECP 203
            + TVPC       YCS+ C +     +HR ECP
Sbjct: 303 TLATVPCDGCSYAKYCSQECLQQAWELYHRTECP 336


>BC035077-1|AAH35077.1|  804|Homo sapiens SET and MYND domain
           containing 4 protein.
          Length = 804

 Score = 77.4 bits (182), Expect = 7e-14
 Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 30/214 (14%)

Query: 20  EDCLSDIKLAISNGYPSELRHKLLLRRADCLIELCRTVAAREALIEAKQH-AATLKLSMS 78
           E CL DI +A ++GYP  L+ K++LR+A+CL+ L R   A + + + +++  AT  L+  
Sbjct: 123 ETCLKDINIAQTHGYPERLQPKIMLRKAECLVALGRLQEASQTISDLERNFTATPALADV 182

Query: 79  HKGEFDRHLCDLEKKLE----VVKDVDRSEEDEIPDFYM-GENEEYVSASNALQLKRSKA 133
                 R+L  L+ K++    + +    +    + D  +  ENE+  +AS+++ L     
Sbjct: 183 LPQTLQRNLHRLKMKMQEKDSLTESFPAALAKTLEDAALREENEQLSNASSSIGLCVDPL 242

Query: 134 AGRHVVTKKATKRGDVIFSEEPYACVTLPNE-----------------GGRLVCETCCRT 176
            GR +V  K    G+++  E+ +  V  P E                  G L C  C + 
Sbjct: 243 KGRCLVATKDILPGELLVQEDAFVSVLNPGELPPPHHGLDSKWDTRVTNGDLYCHRCLKH 302

Query: 177 DINTVPC-------YCSETCREHGLHTFHRWECP 203
            + TVPC       YCS+ C +     +HR ECP
Sbjct: 303 TLATVPCDGCSYAKYCSQECLQQVWELYHRTECP 336


>AB067523-1|BAB67829.1|  558|Homo sapiens KIAA1936 protein protein.
          Length = 558

 Score = 46.0 bits (104), Expect = 2e-04
 Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 24/113 (21%)

Query: 115 ENEEYVSASNALQLKRSKAAGRHVVTKKATKRGDVIFSEEPYACVTLPNE---------- 164
           ENE+  +AS+++ L      GR +V  K    G+++  E+ +  V  P E          
Sbjct: 28  ENEQLSNASSSIGLCVDPLKGRCLVATKDILPGELLVQEDAFVSVLNPGELPPPHHGLDS 87

Query: 165 -------GGRLVCETCCRTDINTVPC-------YCSETCREHGLHTFHRWECP 203
                   G L C  C +  + TVPC       YCS+ C +     +HR ECP
Sbjct: 88  KWDTRVTNGDLYCHRCLKHTLATVPCDGCSYAKYCSQECLQQAWELYHRTECP 140


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.320    0.136    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,279,736
Number of Sequences: 224733
Number of extensions: 1741454
Number of successful extensions: 3717
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3710
Number of HSP's gapped (non-prelim): 5
length of query: 357
length of database: 73,234,838
effective HSP length: 91
effective length of query: 266
effective length of database: 52,784,135
effective search space: 14040579910
effective search space used: 14040579910
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 66 (30.7 bits)