GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002108-TA|BGIBMGA002108-PA|undefined
         (120 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7HQ27 Cluster: Putative uncharacterized protein; n=1; ...    33   1.1  
UniRef50_A4R5R9 Cluster: Putative uncharacterized protein; n=1; ...    33   1.9  
UniRef50_A7F528 Cluster: Putative uncharacterized protein; n=2; ...    32   3.2  
UniRef50_Q2FPF2 Cluster: Heat shock protein 70; n=1; Methanospir...    31   4.3  
UniRef50_Q6NJ26 Cluster: Putative membrane protein; n=1; Coryneb...    31   7.5  
UniRef50_A6TKE0 Cluster: Phage tail tape measure protein, TP901 ...    31   7.5  
UniRef50_Q5QVV6 Cluster: Probable lipoprotein; n=1; Idiomarina l...    30   9.9  
UniRef50_Q0BRG4 Cluster: Peptidase family A24; n=1; Granulibacte...    30   9.9  
UniRef50_A1RKW2 Cluster: Phage Terminase precursor; n=6; Proteob...    30   9.9  
UniRef50_Q389Y0 Cluster: Putative uncharacterized protein; n=1; ...    30   9.9  

>UniRef50_A7HQ27 Cluster: Putative uncharacterized protein; n=1;
           Parvibaculum lavamentivorans DS-1|Rep: Putative
           uncharacterized protein - Parvibaculum lavamentivorans
           DS-1
          Length = 370

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 51  VGSALFAVNAATIWRRWRNVDDLTRVVAELLDALGVRLGRQIIIK 95
           VG A      A++WR W  +  +TRVV +L    GV+   + +I+
Sbjct: 314 VGQAKVGPGTASMWREWNTLHHITRVVRDLGAMAGVQFADRPVIE 358


>UniRef50_A4R5R9 Cluster: Putative uncharacterized protein; n=1;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 1240

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)

Query: 16  SGGLLVTYSLSTLGLALCAGIERCGGNAFQAFICGVGSALFAVNAATIWRRWRNVDDLTR 75
           SG LL +   S L     A +   G + F+  +CG   A+ A    T+   W N    T 
Sbjct: 399 SGPLLKSRPWSALSTESLASVTAEGKSYFEELLCGETLAVGAALGLTVSEYWTN----TT 454

Query: 76  VVAELLDALGVRLGRQIIIK 95
           V +++ +ALG  L  +  +K
Sbjct: 455 VTSDVQEALGTALSAEKNVK 474


>UniRef50_A7F528 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Sclerotinia sclerotiorum 1980
          Length = 192

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 47  FICGVGSALFAVNAATIWRRWRNVDDLTRVVAELLDALGVR 87
           +I G GS    V     W  WR VD+  R++ E +D  G R
Sbjct: 97  WIGGSGSGSGKVGGDVCWVWWRKVDEWARIIEEWVDETGQR 137


>UniRef50_Q2FPF2 Cluster: Heat shock protein 70; n=1;
           Methanospirillum hungatei JF-1|Rep: Heat shock protein
           70 - Methanospirillum hungatei (strain JF-1 / DSM 864)
          Length = 571

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 19/51 (37%), Positives = 25/51 (49%)

Query: 40  GGNAFQAFICGVGSALFAVNAATIWRRWRNVDDLTRVVAELLDALGVRLGR 90
           GG  F   I  V S  F V+A+T   R    D  TR++A +  AL   LG+
Sbjct: 172 GGGTFDVSILSVSSGFFDVDASTGEHRLGGDDLDTRIIAYVTKALQKELGK 222


>UniRef50_Q6NJ26 Cluster: Putative membrane protein; n=1;
           Corynebacterium diphtheriae|Rep: Putative membrane
           protein - Corynebacterium diphtheriae
          Length = 409

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query: 19  LLVTYSLSTLGLALCAGIERCGGNAFQAFICGVGSALFAVNAATIWR 65
           L++T SL  +G AL   +   GG+A    +CG G A+ AV++  + R
Sbjct: 144 LVITLSL-VVGPALAGVLMAAGGSALVVALCGAGYAVAAVSSLALPR 189


>UniRef50_A6TKE0 Cluster: Phage tail tape measure protein, TP901
           family; n=1; Alkaliphilus metalliredigens QYMF|Rep:
           Phage tail tape measure protein, TP901 family -
           Alkaliphilus metalliredigens QYMF
          Length = 585

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 18  GLLVTYSLSTLGLALCAG-IERCGGNAFQAFICGVGSA--LFAVNAATIWRRWRNVDDLT 74
           G L+  S S + L L AG   +    AF      VG+     AV    +W+ WRN D +T
Sbjct: 312 GPLIELSSSLVPLLLAAGPAAKIASAAFAVLATPVGAVGGAVAVLGVGVWQLWRNWDAVT 371

Query: 75  RVVAELLDAL 84
               + +D L
Sbjct: 372 ERSGDAMDWL 381


>UniRef50_Q5QVV6 Cluster: Probable lipoprotein; n=1; Idiomarina
          loihiensis|Rep: Probable lipoprotein - Idiomarina
          loihiensis
          Length = 331

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 19 LLVTYSLSTLGLALCAGIERCGGNAFQAFICGVGSA 54
          +L T + +TLGLA C G +    N F  F  G+  A
Sbjct: 5  MLTTLATATLGLAACGGSDSNDTNDFAQFSLGISDA 40


>UniRef50_Q0BRG4 Cluster: Peptidase family A24; n=1; Granulibacter
           bethesdensis CGDNIH1|Rep: Peptidase family A24 -
           Granulobacter bethesdensis (strain ATCC BAA-1260 /
           CGDNIH1)
          Length = 248

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 26  STLGLALCAGIERCGGNAFQAFICGVGSALFAVNAATIWRRWRNVDDLT 74
           + L +A+CA + R   N F A  C +G AL A+ A    R WR  D LT
Sbjct: 78  AALAVAVCACVARGINNPFLAGDCILGWALLAL-ACIDLRHWRLPDVLT 125


>UniRef50_A1RKW2 Cluster: Phage Terminase precursor; n=6;
           Proteobacteria|Rep: Phage Terminase precursor -
           Shewanella sp. (strain W3-18-1)
          Length = 581

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 21  VTYSLSTLGLALCAGIERCGGNAFQAFICGVGSALFAVNAATIWRR 66
           V YS    G A+CAG +    ++F AFIC +      +N  + W++
Sbjct: 258 VCYSYHEYGKAICAGTKE--DDSFFAFICSLDEGDDPINDESCWQK 301


>UniRef50_Q389Y0 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 459

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 1/78 (1%)

Query: 14  SVSGGLLVTYSLSTLGLALCAGIERCGGNAFQAFICGVGSALFAVNAATIWR-RWRNVDD 72
           SV+G     Y    L L      E+  GN F   +   GS +FA   +T+   R    DD
Sbjct: 376 SVNGDARARYRKYPLALLEHLQEEQDVGNIFTELLRSGGSDVFAALTSTLTELRNSGEDD 435

Query: 73  LTRVVAELLDALGVRLGR 90
           L   V+ LL+AL   + R
Sbjct: 436 LADAVSPLLNALSTEVPR 453


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.329    0.141    0.448 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,591,714
Number of Sequences: 1657284
Number of extensions: 3038809
Number of successful extensions: 11118
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 11113
Number of HSP's gapped (non-prelim): 11
length of query: 120
length of database: 575,637,011
effective HSP length: 90
effective length of query: 30
effective length of database: 426,481,451
effective search space: 12794443530
effective search space used: 12794443530
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 65 (30.3 bits)