GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002108-TA|BGIBMGA002108-PA|undefined
         (120 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X89674-1|CAA61821.1|  157|Homo sapiens putative olfactory recept...    28   8.8  
AF399560-1|AAK95045.1|  216|Homo sapiens olfactory receptor prot...    28   8.8  

>X89674-1|CAA61821.1|  157|Homo sapiens putative olfactory
          receptor protein.
          Length = 157

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 13 QSVSGGLLVTYSLSTLGLALCAGIERCGGNAFQAFICGVGSAL 55
          Q V+G  LVTY  + L   L A +  C  N    F+C +   L
Sbjct: 18 QLVAGLWLVTYLHALLHTVLIAQLSFCASNIIHHFLCDLNPLL 60


>AF399560-1|AAK95045.1|  216|Homo sapiens olfactory receptor
           protein.
          Length = 216

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 13  QSVSGGLLVTYSLSTLGLALCAGIERCGGNAFQAFICGVGSAL 55
           Q V+G  LVTY  + L   L A +  C  N    F+C +   L
Sbjct: 76  QLVAGLWLVTYLHALLHTVLIAQLSFCASNIIHHFLCDLNPLL 118


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.329    0.141    0.448 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,525,056
Number of Sequences: 224733
Number of extensions: 370756
Number of successful extensions: 1160
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1158
Number of HSP's gapped (non-prelim): 2
length of query: 120
length of database: 73,234,838
effective HSP length: 81
effective length of query: 39
effective length of database: 55,031,465
effective search space: 2146227135
effective search space used: 2146227135
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 59 (27.9 bits)