Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002107-TA|BGIBMGA002107-PA|undefined
(787 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0206 + 13005863-13005966,13006918-13007080,13008534-130086... 36 0.12
01_05_0779 + 25128320-25128518,25129048-25129141,25129867-251300... 33 0.88
01_05_0714 + 24555494-24555637,24555884-24556071,24556195-245562... 33 1.2
01_05_0169 + 18874799-18875057,18875103-18875338 33 1.2
03_05_0001 - 19386264-19386284,19386446-19386517,19386614-193873... 32 1.5
03_02_0844 + 11695159-11695263,11695402-11695463,11695789-116958... 32 1.5
07_01_0390 + 2931331-2932299 32 2.0
05_03_0637 - 16465433-16466242 31 2.7
12_02_0674 - 21745321-21746223,21746229-21747608 31 3.5
08_02_1325 - 26146775-26147247,26147397-26148579 31 4.7
02_05_1050 - 33757432-33757664,33757767-33758645,33758720-337591... 31 4.7
07_03_0476 - 18547223-18548187,18548743-18549958 30 6.2
02_01_0015 - 98311-98412,98635-98707,98830-98921,99139-99230,993... 30 8.2
>06_02_0206 +
13005863-13005966,13006918-13007080,13008534-13008632,
13008704-13008817,13009094-13009254,13009746-13009827,
13009972-13010057,13011563-13011742,13011913-13012424,
13012844-13013478
Length = 711
Score = 35.9 bits (79), Expect = 0.12
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 80 AGGLATKRALELKRKYLLGEPSPPAVRKSDSTSQIDNKFEAFRSTITEFQKLLHPAPVSS 139
A G+A R + K G+ SP K + Q D + ST+T F++L PAP SS
Sbjct: 296 AAGIAV-RVEKPKSVQARGDKSPSI--KPEGAKQPDQRSSEAASTVTPFEQLALPAPASS 352
Query: 140 IAQ--PQKPIV--SFQTADGD--IKPQPM 162
+ P +P V S GD KP+P+
Sbjct: 353 SSSKPPVEPAVGPSIDLLSGDDYFKPEPV 381
>01_05_0779 +
25128320-25128518,25129048-25129141,25129867-25130078,
25130924-25131054,25131933-25132041,25132180-25132659,
25133194-25133531,25133810-25133977
Length = 576
Score = 33.1 bits (72), Expect = 0.88
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 463 TSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESLEEASPPLISESTMSSIVP 522
T+ T S NV ST E+ G ++EVS D+ D + PP S++P
Sbjct: 157 TAVGSTLLSHQNVCSTSEVSGGNFGIAEVSFLQDEYDAETT--GVLPPSFLSCGSRSMLP 214
Query: 523 NSIPFSGSSSI 533
S+P S SSS+
Sbjct: 215 ISVPSSSSSSL 225
>01_05_0714 +
24555494-24555637,24555884-24556071,24556195-24556280,
24556359-24556461,24556798-24557000,24557077-24557681,
24557784-24557918,24558040-24558067,24559517-24559596,
24559873-24559975,24560553-24560635,24560915-24561017,
24561596-24561720,24562001-24562103,24562647-24562726,
24563322-24563429,24563521-24563565
Length = 773
Score = 32.7 bits (71), Expect = 1.2
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 8/91 (8%)
Query: 440 PQGELKSPPHCLKYTDTDPSDRSTSEKQTSDSITNVSSTPELKIGR-------LSLSEVS 492
P +KSP H L+ P +T E+ T +S V EL + +SL E
Sbjct: 387 PSPSIKSPEHVLESESNPPDGVTTDEQPTENSPIGVDRDSELVKEKGTSSRHSVSLEEDV 446
Query: 493 SPID-KVDKTESLEEASPPLISESTMSSIVP 522
PID V + LE S +++ T ++ P
Sbjct: 447 MPIDCTVSPPDHLEGGSTEVLTNITSRNVSP 477
>01_05_0169 + 18874799-18875057,18875103-18875338
Length = 164
Score = 32.7 bits (71), Expect = 1.2
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 4/108 (3%)
Query: 77 TRSAGGLATKRALELKRKYLLGEPSPPAVRKSDSTSQIDNKFEAFRSTITEFQKLLHPAP 136
T S G +T A+ R + L P PPA ++ + A T P
Sbjct: 51 TVSTTGASTSTAVGRDRYFFLTPPYPPAFHAL--LGEVVTQPPALEIMHTPLIPTPSPQL 108
Query: 137 VSSIAQPQKPIVSFQTADGDIKPQPMPDIIKNLCNDAPVDLLTKIDSP 184
SS+ P + V +T D +P+ PDI L ++ PV +T I P
Sbjct: 109 GSSMETPIQ--VDSETEGNDTEPEIEPDITDPLEDETPVHRITFIGGP 154
>03_05_0001 - 19386264-19386284,19386446-19386517,19386614-19387357,
19387454-19388884,19388953-19389118,19392035-19392114,
19392393-19392462,19392550-19392761,19392837-19392890,
19393471-19393623,19393715-19393930,19394029-19394248,
19394332-19394399,19394510-19394643,19394755-19394854,
19394943-19395421,19395506-19395699,19396270-19396355,
19396364-19396444,19396842-19397023,19397305-19397346,
19398247-19398558,19399374-19399434,19399435-19399617,
19399744-19399863,19400380-19401051,19402597-19402668,
19402742-19402865,19403563-19403651,19405023-19405097
Length = 2170
Score = 32.3 bits (70), Expect = 1.5
Identities = 33/135 (24%), Positives = 52/135 (38%), Gaps = 12/135 (8%)
Query: 51 PSLPAILVTEATXXXXXXXQDYPLSRTRSAGGLATKRALELKRKYLLGEPSPPAVRKSDS 110
PS PA L+ +AT + S G LA+ L +Y++G PS P +
Sbjct: 1976 PSPPASLINDATLG----------TNPASGGALASNSLPSLASQYIIGRPSTPPFFGTPL 2025
Query: 111 TSQIDNKFEAFRSTITEFQKLLHP-APVSSIAQPQKPIVSFQTADGDIKPQPMPDIIKNL 169
Q+ + S + P AP QP P +FQ + + QPMP + +
Sbjct: 2026 QIQLSSGLAQSVSNPQPSLSSMQPRAPPPPPPQPH-PSQTFQGSLQQPQEQPMPYPLNTI 2084
Query: 170 CNDAPVDLLTKIDSP 184
P+ ++ P
Sbjct: 2085 QPQVPLQFPNQLHVP 2099
>03_02_0844 +
11695159-11695263,11695402-11695463,11695789-11695876,
11695958-11696019,11696250-11696346,11696592-11696984,
11697072-11697611,11697856-11697966,11698102-11698242,
11698290-11698394,11698480-11698557,11699346-11699472,
11699580-11699625,11699709-11699754
Length = 666
Score = 32.3 bits (70), Expect = 1.5
Identities = 23/107 (21%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Query: 452 KYTDTDPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPID--KVDKTESLEEASP 509
KYT +D S+ + S++ ++P+L + +S E PID K+ S ++AS
Sbjct: 439 KYTSSDASNSQAWSAFEAKSVSTQQASPDLSL--MSSIEPKEPIDENKLQLWHSFDDASE 496
Query: 510 PLISESTMSSIVPNSIPFSGSSSIRLYSPAICRSASETFHRSNSRNL 556
+ + + + N ++S+ +P C S+ ++S+ +
Sbjct: 497 TMTLNLSNAQLQTNEHKNVDNNSLTTSNPFTCSITSKESRGNDSQEI 543
>07_01_0390 + 2931331-2932299
Length = 322
Score = 31.9 bits (69), Expect = 2.0
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 7/111 (6%)
Query: 79 SAGGLATKRALELKRKYLLGEPSPPAVRKS-DSTSQIDNKFEAFRSTITEFQ----KLLH 133
S G +T A+ R + L P PPA S + + + T Q +L+H
Sbjct: 162 STTGASTSTAVGRDRYFFLTPPYPPAFHALLGEASMLATESAPYLVDPTAAQPPVPELVH 221
Query: 134 PAPVSSIAQPQKPIVSFQTADGDIKPQPMPDIIKNLCNDAPVDLLTKIDSP 184
SS+ P + V +T D +P+ PDI L ++ PV +T + P
Sbjct: 222 TPLGSSLETPIQ--VDSETEGTDTEPEIEPDITDPLEDETPVPRITFLGGP 270
>05_03_0637 - 16465433-16466242
Length = 269
Score = 31.5 bits (68), Expect = 2.7
Identities = 16/47 (34%), Positives = 17/47 (36%)
Query: 717 LQQEAPPVPPRPAGYMXXXXXXXXXXXXRVPPEQQAATVAELVQVSA 763
L Q PP PP P Y PP Q AA V V+A
Sbjct: 161 LLQPQPPPPPPPLYYAATASTSTVTTTTTAPPPQLAAAAPAAVLVAA 207
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 31.1 bits (67), Expect = 3.5
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 454 TDTDPSDRSTSEKQTSDS-ITNVSSTPELKI--GRLSLSEVSSPIDKVDKTESLEEASPP 510
T PS TS +S S I + ST EL G++ + +SP+ S ++ P
Sbjct: 537 TSKIPSTPRTSLLSSSTSKIPSTPSTCELSTATGKIPSTTCTSPLSTATGKTSSTPSTSP 596
Query: 511 LISESTMSSIVPNSIPFSGSSSIRLYSPA 539
L + ++ +S P++ P S SS+I++ + A
Sbjct: 597 LSTSTSKTSSTPSTSPLS-SSTIKIPTTA 624
>08_02_1325 - 26146775-26147247,26147397-26148579
Length = 551
Score = 30.7 bits (66), Expect = 4.7
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Query: 443 ELKSPPHCLKYTDTDPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTE 502
ELKS H KY + DR +E++T D I ++ + + E+ S +K +
Sbjct: 306 ELKSNDH--KYVEDKDRDRLANERKTKDRIEEKEKVGKVVVSKQECKELDSLGASKNKID 363
Query: 503 SLEEASPPLISESTMSSI 520
L+ L E T +
Sbjct: 364 GLQRQLGQLNEEFTSDDV 381
>02_05_1050 -
33757432-33757664,33757767-33758645,33758720-33759109,
33759488-33759613,33760497-33760557
Length = 562
Score = 30.7 bits (66), Expect = 4.7
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 462 STSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESLEEASPPLISESTMSSIV 521
STS+++ S T+ + R S++ V +P KV + P ++SE + V
Sbjct: 111 STSKRRDS---TDPCFNTQSAAARPSVTRVRTP-HKVASSAWKPLTQPIVMSEDLKRASV 166
Query: 522 PNSIPFSGSSSIRLYSPAICRSASETFHRSNSRNLESPRSGD 563
P++ P + S + A S T HR RN ES GD
Sbjct: 167 PSTNPSAKRSRVASSQAA---EDSPTVHRGKKRNEESASKGD 205
>07_03_0476 - 18547223-18548187,18548743-18549958
Length = 726
Score = 30.3 bits (65), Expect = 6.2
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 444 LKSPPHCLKYTDTDPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKV 498
L++ H L T DPS S TS SS+P S+ +P+D+V
Sbjct: 41 LQTLAHALMSTAADPSSLSGDSSPTSSGDAESSSSPSSSAAAAGGSDDPAPVDQV 95
>02_01_0015 -
98311-98412,98635-98707,98830-98921,99139-99230,
99363-99432,99683-99781,100008-100093,100541-100655,
100853-100918,101064-101143,101226-101301,101915-102151,
102559-102590,102993-103047,103384-103498,104497-104579,
105182-105232,105740-105802,105945-106010,106144-106279,
106503-106591,106844-106964,107138-107340,107434-107820
Length = 862
Score = 29.9 bits (64), Expect = 8.2
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 446 SPPHCLKYTDTDPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESL 504
SP +KYT+ + S S+K++S S+ +T + KI ++ + V+ D +DK + +
Sbjct: 394 SPYMKIKYTNLEDSSGLVSQKRSSASLICQENTKKRKIHKVEVFAVAGK-DDIDKDDGV 451
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.311 0.127 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,994,606
Number of Sequences: 37544
Number of extensions: 717043
Number of successful extensions: 1632
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1624
Number of HSP's gapped (non-prelim): 19
length of query: 787
length of database: 14,793,348
effective HSP length: 88
effective length of query: 699
effective length of database: 11,489,476
effective search space: 8031143724
effective search space used: 8031143724
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 64 (29.9 bits)
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