Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002107-TA|BGIBMGA002107-PA|undefined
(787 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.024
SB_35730| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.054
SB_43750| Best HMM Match : NAP (HMM E-Value=3.3) 34 0.38
SB_42552| Best HMM Match : RhoGAP (HMM E-Value=0) 33 0.67
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 33 1.2
SB_19570| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.5
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 32 2.0
SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42) 31 3.6
SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0) 31 4.7
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) 31 4.7
SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33) 30 6.2
SB_10357| Best HMM Match : zf-C2H2 (HMM E-Value=9.8e-38) 30 6.2
SB_30317| Best HMM Match : Protamine_3 (HMM E-Value=0.091) 30 6.2
SB_26558| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.2
SB_50834| Best HMM Match : GCR (HMM E-Value=2.5) 30 8.2
SB_27438| Best HMM Match : DUF548 (HMM E-Value=3) 30 8.2
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 38.3 bits (85), Expect = 0.024
Identities = 39/150 (26%), Positives = 53/150 (35%), Gaps = 6/150 (4%)
Query: 393 SPSKDRSMNFIEKTFSETVLKPASQEVSVRQEEPIXXXXXXXXXXXXPQGELKSPPHCLK 452
+PS D S N S+ P+S S PI P PH
Sbjct: 494 NPSSDPSPNPSSNPSSDPSPNPSSNPSSEPSPNPISNPSISTSPISNPHPSSNPSPHPSS 553
Query: 453 YTDTDPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVS---SP--IDKVDKTESLEEA 507
++PS + S +SD N SS P L S S S SP I ++ +
Sbjct: 554 NPSSEPSP-NPSSNPSSDPSPNPSSDPSLSFSPSSSSSPSVRPSPNLISNPNRNSNSNSN 612
Query: 508 SPPLISESTMSSIVPNSIPFSGSSSIRLYS 537
P S + S+ PN P +S R +S
Sbjct: 613 RNPNPSSNPSPSLSPNPSPNPSTSPYRNHS 642
>SB_35730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 37.1 bits (82), Expect = 0.054
Identities = 34/176 (19%), Positives = 53/176 (30%)
Query: 459 SDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESLEEASPPLISESTMS 518
S S+S +S S ++ SS S S SS + S +S S S+ S
Sbjct: 71 SSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 130
Query: 519 SIVPNSIPFSGSSSIRLYSPAICRSASETFHRSNSRNLESPRSGDXXXXXXXXXXXXXXX 578
S +S S SSS S + S+S + SNS + S S
Sbjct: 131 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSSSSS 190
Query: 579 XXXXXAQDTTDKVQEIKXXXXXXXXXXXXXXXXXXGSGPRANRKCNRRIRASPTCS 634
+ ++ S ++ N +S + S
Sbjct: 191 SSSSSSSSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSNNSSSSSSSSS 246
Score = 33.9 bits (74), Expect = 0.51
Identities = 30/135 (22%), Positives = 48/135 (35%)
Query: 454 TDTDPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESLEEASPPLIS 513
+ + S S+S +S S ++ SS+ S S SS + S +S S
Sbjct: 120 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSS 179
Query: 514 ESTMSSIVPNSIPFSGSSSIRLYSPAICRSASETFHRSNSRNLESPRSGDXXXXXXXXXX 573
S+ SS +S S SSS S + S+S + SNS + S S
Sbjct: 180 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSNNSS 239
Query: 574 XXXXXXXXXXAQDTT 588
+ ++
Sbjct: 240 SSSSSSSSSSSSSSS 254
>SB_43750| Best HMM Match : NAP (HMM E-Value=3.3)
Length = 514
Score = 34.3 bits (75), Expect = 0.38
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Query: 443 ELKSPPHCLKYTDTDPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTE 502
+L++ H L+ T SD+++S QTS S SS + S S+ +S D+ ++
Sbjct: 83 KLQTYLHYLRSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSD 142
Query: 503 SLEEASPPLISESTMSSIVPNSIPFSGSSSIRLYSPAICRSASETFHRSNSRNLESPRSG 562
+ S+ T SS +S SSS + S S+ +T + + + S
Sbjct: 143 QTSSSDQTSSSDQTSSSDQTSSSD-QTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSS 201
Query: 563 D 563
D
Sbjct: 202 D 202
Score = 30.3 bits (65), Expect = 6.2
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Query: 456 TDPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESLEEASPPLISES 515
T SD+++S QTS S SS + S S+ +S D+ ++ + S+
Sbjct: 108 TSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQ 167
Query: 516 TMSSIVPNSIPFSGSSSIRLYSPAICRSASETFHRSNSRNLESPRSGD 563
T SS +S SSS + S S+ +T + + + S D
Sbjct: 168 TSSSDQTSSSD-QTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSD 214
Score = 30.3 bits (65), Expect = 6.2
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Query: 456 TDPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESLEEASPPLISES 515
T SD+++S QTS S SS + S S+ +S D+ ++ + S+
Sbjct: 144 TSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQ 203
Query: 516 TMSSIVPNSIPFSGSSSIRLYSPAICRSASETFHRSNSRNLESPRSGD 563
T SS +S SSS + S S+ +T + + + S D
Sbjct: 204 TSSSDQTSSSD-QTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSD 250
Score = 29.9 bits (64), Expect = 8.2
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 456 TDPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESLEEASPPLISES 515
T SD+++S QTS S SS + S S+ +S D+ ++ + S+
Sbjct: 180 TSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQ 239
Query: 516 TMSSIVPNSIPFSGSS 531
T SS +S + SS
Sbjct: 240 TSSSDQTSSSDQTSSS 255
Score = 29.9 bits (64), Expect = 8.2
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 456 TDPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESLEEASPPLISES 515
T SD+++S QTS S SS + S S+ +S D+ ++ + S+
Sbjct: 186 TSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQ 245
Query: 516 TMSSIVPNSIPFSGSS 531
T SS +S + SS
Sbjct: 246 TSSSDQTSSSDQTSSS 261
Score = 29.9 bits (64), Expect = 8.2
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 456 TDPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESLEEASPPLISES 515
T SD+++S QTS S SS + S S+ +S D+ ++ + S+
Sbjct: 192 TSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQTSSSDQ 251
Query: 516 TMSSIVPNSIPFSGSS 531
T SS +S + SS
Sbjct: 252 TSSSDQTSSSDQTSSS 267
>SB_42552| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 945
Score = 33.5 bits (73), Expect = 0.67
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 279 RDXXXXXXXXXXXSDWAAESGVLDDCGFDEKDDRKRSKNPRTLSGPKLVHEAKN 332
RD D+ AE + DD G D ++ SKN TL GP ++H+ K+
Sbjct: 513 RDTLNALLAFLSKVDFYAEDKI-DDMGCDIPGNKMNSKNLATLIGPNILHKVKS 565
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 32.7 bits (71), Expect = 1.2
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 453 YTDTDPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESLEEASPPLI 512
+ DT P+D+ + Q S S + S+P I +S I+K +T + ++
Sbjct: 359 HNDTPPADKLKTSPQASKSTSPKISSPAQGIKLIS-------IEKAQRTPDNSKTPVKIV 411
Query: 513 SESTMSSIVPNSIPFSGSSSIRLYSPAICRSASET 547
S + +P + S + I + P C+ + T
Sbjct: 412 EPSKTKATIPANTDVSDGAKISIVKPEACKPSPPT 446
>SB_19570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 32.3 bits (70), Expect = 1.5
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 454 TDTDPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESLEEASPPLIS 513
T T PSDR ++ T+DS ++V + G+ SE+ P+ V K+ L AS ++S
Sbjct: 19 TSTTPSDRDANDIVTTDSSSSVKH-DHIVDGKTVKSEIEQPVITV-KSLVLRNASDVVVS 76
Query: 514 ESTMSSIVPNSIPFSGSSSIRLYSPAI 540
IV N I S S ++ P I
Sbjct: 77 SDDEVEIV-NII--SAESKKKIIGPPI 100
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 31.9 bits (69), Expect = 2.0
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 459 SDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESLEEASPPLISESTMS 518
SD STS+ TSD+ + +ST + S S+ +S D S ++ S P S + S
Sbjct: 200 SDNSTSDNSTSDNSNSDNSTSDNSTSDNSNSD-NSYTDNSTSDNSKKDNSNPNNSNTDNS 258
Query: 519 SIVPNSIPFSGSSSIRLYSPAICRSASETFHRSNSRNLESPRSGD 563
S NS P + +S + ++S S++ N ++ S +
Sbjct: 259 SSADNSNPDNSNSDNSNTDNSNSDNSSSDNSNSDNSNTDNSTSNN 303
Score = 31.1 bits (67), Expect = 3.6
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Query: 454 TDTDPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESLEEASPPLIS 513
TD SD S+S SD+ T+ +ST + S S+ +S D + S + S S
Sbjct: 185 TDNSGSDNSSSGNFNSDNSTSDNSTSDNSNSDNSTSD-NSTSDNSNSDNSYTDNSTSDNS 243
Query: 514 ESTMSSIVPNSIPFSGSSSIRLYSPAICRSASETFHRSNSRNLESPRS 561
+ S+ PN+ SSS +P S + SNS N S S
Sbjct: 244 KKDNSN--PNNSNTDNSSSADNSNPDNSNSDNSNTDNSNSDNSSSDNS 289
>SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42)
Length = 1712
Score = 31.1 bits (67), Expect = 3.6
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Query: 304 CGFDEKDDRKRSKNPRTLSGPKLVHEAKNISAVASHVCGKTSPTEPVVYSNALEHFEFAD 363
C KD R S N R L + + +A+ + + S+ T+ E V N L+H D
Sbjct: 1479 CSNHAKDSRD-SINSRNLRDSRHLRDAQLVPSSGSNTLVSTTSVESAVQCNLLDHNNNLD 1537
Query: 364 EGEQDPSLESPLTPKNYGYMELVDDD 389
E +P + T + G + DD
Sbjct: 1538 E-NPEPVVSRKRTGVDSGVQVTLSDD 1562
>SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 2726
Score = 30.7 bits (66), Expect = 4.7
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 19/120 (15%)
Query: 451 LKYTDTDPSDRSTSEKQTSDSITN------------VSSTPELKIGRLSLSEVSSPIDKV 498
L + DP ST+E+ +S ++T+ ST EL LS++ S P +
Sbjct: 903 LSLSQHDPHSSSTTEEMSSSALTSSLSPSSPHGAPLSLSTEELSTSSLSITS-SLPQQSM 961
Query: 499 DKTESLEEASPPLISEST-MSSIVPNSI--PFSGS---SSIRLYSPAICRSASETFHRSN 552
E +SPP S+ST +SS S+ P S S RL SP++ S +T SN
Sbjct: 962 QSPSPPEYSSPPSSSQSTFLSSPSSTSLQQPSPSSQPHSEPRLPSPSLESSTLQTSQLSN 1021
>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
Length = 1774
Score = 30.7 bits (66), Expect = 4.7
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
Query: 455 DTDPSDRS--TSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESLEEASPP-- 510
D+ SD S T SI++ S + K R S S K D + S EE+ PP
Sbjct: 656 DSSESDNSSMTRHADIEKSISSCSEIGKRKKSRSSKQSASPRAKKQDYSTSSEESEPPCY 715
Query: 511 -LISESTMSSIVPNSIPFSGSSSIRLYSPAICRS 543
E S ++ + + G + I +P + +S
Sbjct: 716 LFYKERDSSKVLIDHLNDFGGTEIEKTTPIVAKS 749
>SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33)
Length = 665
Score = 30.3 bits (65), Expect = 6.2
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 696 LGPRHKEPQ-QRITNAHKSTGALQQEAPPVPPRP 728
+GP P+ Q+ T +H +++++APPVPP P
Sbjct: 171 VGPETLTPKKQQPTASHSLGSSMKRKAPPVPPSP 204
>SB_10357| Best HMM Match : zf-C2H2 (HMM E-Value=9.8e-38)
Length = 509
Score = 30.3 bits (65), Expect = 6.2
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 457 DPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESL---EEASP-PLI 512
DP D S + + S S N+S++P GRL + + + + + SL E+ SP +I
Sbjct: 151 DPLDLSMASRNLSKSTENLSASP----GRLRVGSANKLLSRSCENISLLNREQKSPNKII 206
Query: 513 SESTMSSIVPNSIPFSGSSSIRLYS 537
S SS V +SI S S+ R+ S
Sbjct: 207 LPSLDSSPVCDSINISEPSADRILS 231
>SB_30317| Best HMM Match : Protamine_3 (HMM E-Value=0.091)
Length = 761
Score = 30.3 bits (65), Expect = 6.2
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 454 TDTDPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESLEEASPPLIS 513
T T PSDR ++ T++S ++V + G+ SE+ P+ V K+ L AS ++S
Sbjct: 19 TSTTPSDRDANDIVTTESSSSVKH-DHIVDGKTVKSEIEQPVITV-KSLVLRNASDIVVS 76
Query: 514 ESTMSSIVPNSIPFSGSSSIRLYSPAI 540
IV N I S S ++ P I
Sbjct: 77 SDDEVEIV-NII--SAESKKKIIGPPI 100
>SB_26558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 879
Score = 30.3 bits (65), Expect = 6.2
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 672 DPELARERRSKGIMKSISSYLNRRLGPRHKEPQQRITNAHKSTGALQQEAPPVPPRP 728
D L R +R G + S S YL+ + P P R ++ T + Q PVPP+P
Sbjct: 344 DSPLFRNKRKSGDLLSASGYLDSLVSP--NTPNTR-SDTPSGTISPQATPKPVPPKP 397
>SB_50834| Best HMM Match : GCR (HMM E-Value=2.5)
Length = 909
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 453 YTDTDPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEV 491
Y + S S E+ TSD I++VSS + RLSL E+
Sbjct: 53 YEEEPTSSISEQEQDTSDDISSVSSHSITTVPRLSLDEL 91
>SB_27438| Best HMM Match : DUF548 (HMM E-Value=3)
Length = 331
Score = 29.9 bits (64), Expect = 8.2
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 705 QRITNAHK-STGALQQEAPPVPPRPAGYMXXXXXXXXXXXXRVPPEQQAATVAELVQVSA 763
Q+ T++ K A+ E PV A M VPP +Q+ATV + +A
Sbjct: 227 QKATDSMKLGANAINTETKPVG---AHNMAGGHPRVQHATDNVPPRRQSATVKVHAEGAA 283
Query: 764 QRDAHQALMAADRRRTAAHSSVGD 787
D A R AAHS+ G+
Sbjct: 284 APDLGSAGAVPASARQAAHSTSGE 307
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.311 0.127 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,510,119
Number of Sequences: 59808
Number of extensions: 801244
Number of successful extensions: 1691
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1636
Number of HSP's gapped (non-prelim): 47
length of query: 787
length of database: 16,821,457
effective HSP length: 88
effective length of query: 699
effective length of database: 11,558,353
effective search space: 8079288747
effective search space used: 8079288747
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 64 (29.9 bits)
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