Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002107-TA|BGIBMGA002107-PA|undefined
(787 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 37 0.048
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 33 0.59
Z49069-3|CAA88866.4| 346|Caenorhabditis elegans Hypothetical pr... 33 0.78
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 33 0.78
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 33 0.78
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 33 0.78
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 33 0.78
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 33 1.0
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 33 1.0
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 33 1.0
Z49909-1|CAA90105.1| 298|Caenorhabditis elegans Hypothetical pr... 31 2.4
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 31 2.4
Z83103-1|CAB05474.1| 358|Caenorhabditis elegans Hypothetical pr... 31 4.2
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 30 5.5
Z48582-7|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 30 7.3
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 30 7.3
Z81495-5|CAB04059.1| 178|Caenorhabditis elegans Hypothetical pr... 29 9.6
Z81072-13|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 29 9.6
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 29 9.6
Z49068-5|CAA88863.2| 707|Caenorhabditis elegans Hypothetical pr... 29 9.6
U97011-2|AAB52325.2| 689|Caenorhabditis elegans Hypothetical pr... 29 9.6
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 37.1 bits (82), Expect = 0.048
Identities = 45/206 (21%), Positives = 73/206 (35%), Gaps = 7/206 (3%)
Query: 307 DEKDDRKRSKNPRTLSGPKLV---HEAKNISAVASHVCGKTSPTEPVVYSNALEHFEFAD 363
+EK +KRSK + S + E + + + K +P + V + E +
Sbjct: 315 EEKSSKKRSKKSKKESDEEQQASDSEEEVVEVKKNSKSPKKTPKKTAVKEES-EESSGDE 373
Query: 364 EGEQDPSLESPLTPKNYGYMELVDDDYAYSPSKDRSMNFIEKTFSETVLKPASQEVSVRQ 423
E E +S K D++ S + K+ ++ K S+E S
Sbjct: 374 EEEVVKKKKSSKINKRKAKESSSDEEEEVEESPKKKTKSPRKSSKKSAAKEESEEESSDN 433
Query: 424 EEPIXXXXXXXXXXXXPQGELKSPPHCLKYTDTDPSDRSTSEKQTSDSITNVSSTPELKI 483
EE P+ K P K +PSD E++ +S TP K
Sbjct: 434 EEEEEVDYSPKKKVKSPKKSSKKP--AAKVESEEPSDNEEEEEEVEESPIKKDKTPR-KY 490
Query: 484 GRLSLSEVSSPIDKVDKTESLEEASP 509
R S ++V S ++ E E SP
Sbjct: 491 SRKSAAKVESTESSGNEEEEEVEESP 516
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical
protein K10D2.3 protein.
Length = 1425
Score = 33.5 bits (73), Expect = 0.59
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 108 SDSTSQIDNKFEAFRSTITEF-QKLLHPAPVSSIAQPQKPIVSFQTADGDIKPQPMPDII 166
S+ +S+ID K +A S ++E +KL +SS + S + +IKP+P I
Sbjct: 799 SEDSSEIDEKTKAADSNVSEIAEKLEETLKISSQKNIDVAVTSMPVST-EIKPEP----I 853
Query: 167 KNLCNDAPVDLLTKIDSPLC 186
L N+APV + + P C
Sbjct: 854 TKLSNEAPVK-IKNVAQPQC 872
>Z49069-3|CAA88866.4| 346|Caenorhabditis elegans Hypothetical
protein K12D12.4a protein.
Length = 346
Score = 33.1 bits (72), Expect = 0.78
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 300 VLDDCGFDEKDDRKRSKNPRTLSGPKLV-HEAKNISAVASH 339
V+DDCGFD+ D P + +GPKL E +I+ + H
Sbjct: 138 VIDDCGFDDFQDNVLLCRPYSQNGPKLTFKEYMDIAEICYH 178
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 33.1 bits (72), Expect = 0.78
Identities = 48/227 (21%), Positives = 84/227 (37%), Gaps = 11/227 (4%)
Query: 345 SPT--EPVVYSNALEHFEFADEGEQDPSL--ESPLTP--KNYGYMELVDDDYAYSPSKDR 398
SPT E +A E + + E+ P E P +P K + DD+ K++
Sbjct: 1633 SPTKKEKSPEKSATEDVKSPTKKEKSPEKVEEKPTSPTKKESSPTKKTDDEVKSPTKKEK 1692
Query: 399 SMNFIEKTFSETVLKPASQEVSVRQEEPIXXXXXXXXXXXXPQGELK---SPPHCLKYTD 455
S +E+ + K S E SV +E P+ K SP
Sbjct: 1693 SPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPKSPTKKEKSPEKSAAEEV 1752
Query: 456 TDPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESLEE-ASPPLISE 514
P+ + S +++++ + E +++ EV SP K E +EE + P E
Sbjct: 1753 KSPTKKEKSPEKSAEEKPKSPTKKESSPVKMADDEVKSPTKKEKSPEKVEEKPASPTKKE 1812
Query: 515 STMSSIVPNSIPFSGSSSIRLYSPAICRSASETFHRSNSRNLESPRS 561
T + S + + S ++ E+ +S + E P+S
Sbjct: 1813 KTPEKSAAEELK-SPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKS 1858
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 33.1 bits (72), Expect = 0.78
Identities = 48/227 (21%), Positives = 84/227 (37%), Gaps = 11/227 (4%)
Query: 345 SPT--EPVVYSNALEHFEFADEGEQDPSL--ESPLTP--KNYGYMELVDDDYAYSPSKDR 398
SPT E +A E + + E+ P E P +P K + DD+ K++
Sbjct: 1633 SPTKKEKSPEKSATEDVKSPTKKEKSPEKVEEKPTSPTKKESSPTKKTDDEVKSPTKKEK 1692
Query: 399 SMNFIEKTFSETVLKPASQEVSVRQEEPIXXXXXXXXXXXXPQGELK---SPPHCLKYTD 455
S +E+ + K S E SV +E P+ K SP
Sbjct: 1693 SPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPKSPTKKEKSPEKSAAEEV 1752
Query: 456 TDPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESLEE-ASPPLISE 514
P+ + S +++++ + E +++ EV SP K E +EE + P E
Sbjct: 1753 KSPTKKEKSPEKSAEEKPKSPTKKESSPVKMADDEVKSPTKKEKSPEKVEEKPASPTKKE 1812
Query: 515 STMSSIVPNSIPFSGSSSIRLYSPAICRSASETFHRSNSRNLESPRS 561
T + S + + S ++ E+ +S + E P+S
Sbjct: 1813 KTPEKSAAEELK-SPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKS 1858
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 33.1 bits (72), Expect = 0.78
Identities = 48/227 (21%), Positives = 84/227 (37%), Gaps = 11/227 (4%)
Query: 345 SPT--EPVVYSNALEHFEFADEGEQDPSL--ESPLTP--KNYGYMELVDDDYAYSPSKDR 398
SPT E +A E + + E+ P E P +P K + DD+ K++
Sbjct: 1633 SPTKKEKSPEKSATEDVKSPTKKEKSPEKVEEKPTSPTKKESSPTKKTDDEVKSPTKKEK 1692
Query: 399 SMNFIEKTFSETVLKPASQEVSVRQEEPIXXXXXXXXXXXXPQGELK---SPPHCLKYTD 455
S +E+ + K S E SV +E P+ K SP
Sbjct: 1693 SPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPKSPTKKEKSPEKSAAEEV 1752
Query: 456 TDPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESLEE-ASPPLISE 514
P+ + S +++++ + E +++ EV SP K E +EE + P E
Sbjct: 1753 KSPTKKEKSPEKSAEEKPKSPTKKESSPVKMADDEVKSPTKKEKSPEKVEEKPASPTKKE 1812
Query: 515 STMSSIVPNSIPFSGSSSIRLYSPAICRSASETFHRSNSRNLESPRS 561
T + S + + S ++ E+ +S + E P+S
Sbjct: 1813 KTPEKSAAEELK-SPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKS 1858
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 33.1 bits (72), Expect = 0.78
Identities = 48/227 (21%), Positives = 84/227 (37%), Gaps = 11/227 (4%)
Query: 345 SPT--EPVVYSNALEHFEFADEGEQDPSL--ESPLTP--KNYGYMELVDDDYAYSPSKDR 398
SPT E +A E + + E+ P E P +P K + DD+ K++
Sbjct: 1633 SPTKKEKSPEKSATEDVKSPTKKEKSPEKVEEKPTSPTKKESSPTKKTDDEVKSPTKKEK 1692
Query: 399 SMNFIEKTFSETVLKPASQEVSVRQEEPIXXXXXXXXXXXXPQGELK---SPPHCLKYTD 455
S +E+ + K S E SV +E P+ K SP
Sbjct: 1693 SPQTVEEKPASPTKKEKSPEKSVVEEVKSPKEKSPEKAEEKPKSPTKKEKSPEKSAAEEV 1752
Query: 456 TDPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESLEE-ASPPLISE 514
P+ + S +++++ + E +++ EV SP K E +EE + P E
Sbjct: 1753 KSPTKKEKSPEKSAEEKPKSPTKKESSPVKMADDEVKSPTKKEKSPEKVEEKPASPTKKE 1812
Query: 515 STMSSIVPNSIPFSGSSSIRLYSPAICRSASETFHRSNSRNLESPRS 561
T + S + + S ++ E+ +S + E P+S
Sbjct: 1813 KTPEKSAAEELK-SPTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKS 1858
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 32.7 bits (71), Expect = 1.0
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 667 TPSFSDPELARERRSKGIMKSISSYLNRRLGPRHKEPQQRITNAHKSTGALQQEAPPVPP 726
T + P+ RE R +G S+Y G T T + QQ PPVPP
Sbjct: 1044 TEKLTVPDWYRENRPQGQTAQTSTYRYGN-GVEPMSTTTTTTTVINGTSSHQQAPPPVPP 1102
Query: 727 RPAG 730
+P G
Sbjct: 1103 QPIG 1106
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 32.7 bits (71), Expect = 1.0
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 667 TPSFSDPELARERRSKGIMKSISSYLNRRLGPRHKEPQQRITNAHKSTGALQQEAPPVPP 726
T + P+ RE R +G S+Y G T T + QQ PPVPP
Sbjct: 1003 TEKLTVPDWYRENRPQGQTAQTSTYRYGN-GVEPMSTTTTTTTVINGTSSHQQAPPPVPP 1061
Query: 727 RPAG 730
+P G
Sbjct: 1062 QPIG 1065
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 32.7 bits (71), Expect = 1.0
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 667 TPSFSDPELARERRSKGIMKSISSYLNRRLGPRHKEPQQRITNAHKSTGALQQEAPPVPP 726
T + P+ RE R +G S+Y G T T + QQ PPVPP
Sbjct: 1044 TEKLTVPDWYRENRPQGQTAQTSTYRYGN-GVEPMSTTTTTTTVINGTSSHQQAPPPVPP 1102
Query: 727 RPAG 730
+P G
Sbjct: 1103 QPIG 1106
>Z49909-1|CAA90105.1| 298|Caenorhabditis elegans Hypothetical
protein C14A4.1 protein.
Length = 298
Score = 31.5 bits (68), Expect = 2.4
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 457 DPSDRSTSEKQTSDSITNVSSTPELKIGRL-----SLSEVSSPIDKVDKTESLEEASPPL 511
DPS + K D VS T ++ +GR+ S + +SP D VD T S +
Sbjct: 105 DPSVKDVLRKYAQDPCPEVSETCQIALGRVEWVEKSGKDTNSPYDSVDPTPSASTSDVEE 164
Query: 512 ISESTMSSIVP 522
++ + + + +P
Sbjct: 165 LAATLIDASLP 175
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 31.5 bits (68), Expect = 2.4
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 454 TDTDPSDRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVD-KTESLEEASPPLI 512
T T PS ST+ TS + V++ + I +S S V+S + TES A +
Sbjct: 523 TVTLPSGSSTATAGTSPQASTVTTVTD--ISTVSGSTVTSQTAESSLSTESPTSAGSSIS 580
Query: 513 SESTMSSIVPNSIPFSGSSSI 533
+ ST+SS IP S +SSI
Sbjct: 581 TVSTVSSQPSTYIPVSSASSI 601
>Z83103-1|CAB05474.1| 358|Caenorhabditis elegans Hypothetical
protein D1025.1 protein.
Length = 358
Score = 30.7 bits (66), Expect = 4.2
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 454 TDTDPSDRSTSEKQTSDSITNVSS----TPELKIGRLSLSEVSSPIDKVDK 500
+ ++PS + T K+TS + VSS TP LKI L SE + + K K
Sbjct: 59 SSSNPSPKKTPTKRTSGTARRVSSSIKTTPALKIDSLESSEETESLSKSTK 109
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 30.3 bits (65), Expect = 5.5
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Query: 699 RHKEPQQRITNAHKSTGALQQEAPPVP--PRPAGY---MXXXXXXXXXXXXRVPPEQQAA 753
R +E QQ++ + + G+LQQ A P P P P Y + RVPP+ +
Sbjct: 338 RAREQQQQMYHQAGARGSLQQRAAPAPADPTPGSYQHIVNAVPGGGANPMRRVPPQARPG 397
Query: 754 TVAELVQVSAQRDAH 768
+ + R H
Sbjct: 398 MIGGAANNNRARPTH 412
>Z48582-7|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.9 bits (64), Expect = 7.3
Identities = 29/115 (25%), Positives = 43/115 (37%), Gaps = 5/115 (4%)
Query: 406 TFSETVLKPASQEVSVRQEEPIXXXXXXXXXXXXPQGELKSPPHCLKYTDTDPSDR-STS 464
T S + +P++ V+ P + P + T T PS +TS
Sbjct: 436 TASTSTTEPSTSTVTT---SPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTS 492
Query: 465 EKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESLEEASPPLISESTMSS 519
S S T SS+ S S VSS + S +++S SE+T SS
Sbjct: 493 TTAPSTSTTGPSSSSSTPSSTAS-SSVSSTASSTQSSTSTQQSSTTTKSETTTSS 546
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.9 bits (64), Expect = 7.3
Identities = 29/115 (25%), Positives = 43/115 (37%), Gaps = 5/115 (4%)
Query: 406 TFSETVLKPASQEVSVRQEEPIXXXXXXXXXXXXPQGELKSPPHCLKYTDTDPSDR-STS 464
T S + +P++ V+ P + P + T T PS +TS
Sbjct: 436 TASTSTTEPSTSTVTT---SPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTS 492
Query: 465 EKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESLEEASPPLISESTMSS 519
S S T SS+ S S VSS + S +++S SE+T SS
Sbjct: 493 TTAPSTSTTGPSSSSSTPSSTAS-SSVSSTASSTQSSTSTQQSSTTTKSETTTSS 546
>Z81495-5|CAB04059.1| 178|Caenorhabditis elegans Hypothetical
protein F08G2.5 protein.
Length = 178
Score = 29.5 bits (63), Expect = 9.6
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 387 DDDYAYSPSKDRSMNFIEKTFSETVLKPASQEVSVRQEEPIXXXXXXXXXXXXPQGELKS 446
DD+ YS S ++ ++ ++ P S E+ + E P +
Sbjct: 31 DDEDRYSDSTVSTLTSQDRRDTQGCQYPRSSELPI-SESPAPRARRARKQRSKRKSV--K 87
Query: 447 PPHCLKYTDTDPSDRSTSEKQTSDSITNVSST 478
PP+ +D SD S+S + DS+++ SST
Sbjct: 88 PPNTSSDDSSDDSDDSSSSSSSDDSVSSKSST 119
>Z81072-13|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 29.5 bits (63), Expect = 9.6
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 466 KQTSDSITNVSSTPELKIGRLSLSE--VSSPIDKVDKTESLEEASPPLISESTMSSIVPN 523
K+ SD++ V S E K + S IDK+ K S + SPP I + + + P+
Sbjct: 995 KRISDTLKTVESRAESKEDGADIKYGICSVFIDKLRKLTSRQSTSPPSICQECL--LCPH 1052
Query: 524 SIPFSG 529
PF G
Sbjct: 1053 QQPFKG 1058
>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 29.5 bits (63), Expect = 9.6
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 466 KQTSDSITNVSSTPELKIGRLSLSE--VSSPIDKVDKTESLEEASPPLISESTMSSIVPN 523
K+ SD++ V S E K + S IDK+ K S + SPP I + + + P+
Sbjct: 995 KRISDTLKTVESRAESKEDGADIKYGICSVFIDKLRKLTSRQSTSPPSICQECL--LCPH 1052
Query: 524 SIPFSG 529
PF G
Sbjct: 1053 QQPFKG 1058
>Z49068-5|CAA88863.2| 707|Caenorhabditis elegans Hypothetical
protein K01C8.5 protein.
Length = 707
Score = 29.5 bits (63), Expect = 9.6
Identities = 27/84 (32%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 451 LKYTDTDPSDRSTSEKQTSDSITNVS---STPELKIGRLSLSEVSSPIDKVDKTESLEEA 507
L + SD EK TS +NVS +P L R S S T L
Sbjct: 303 LHQKEKSSSDEEVHEKSTSSRHSNVSRSSKSPYLNDDRAP-SRGSKCTSSHHSTPKLLTP 361
Query: 508 SPPLISESTMSSIVPNSIPFSGSS 531
SP + +S NSIPF SS
Sbjct: 362 SPQYLKDSDDDDNWKNSIPFMSSS 385
>U97011-2|AAB52325.2| 689|Caenorhabditis elegans Hypothetical
protein F31F7.2 protein.
Length = 689
Score = 29.5 bits (63), Expect = 9.6
Identities = 23/112 (20%), Positives = 49/112 (43%), Gaps = 5/112 (4%)
Query: 400 MNFIEKTFSETVLKPASQEVSVRQEEPIXXXXXXXXXXXXPQGELKSPPHCLKYTDTDPS 459
++F+ + S +K S +V++ Q P P+ +++ P+C +T P+
Sbjct: 110 IDFLRQVMS--TMKMGSSKVAMAQFTPWSRIEWSLANSTYPESKVQEAPYCPCELETCPT 167
Query: 460 DRSTSEKQTSDSITNVSSTPELKIGRLSLSEVSSPIDKVDKTESLEEASPPL 511
+ +++ + N S P++ L +S P+ +V E L + PL
Sbjct: 168 TSINALTRSTMNTANRKSVPDV---ILVISNSYQPLIEVLPNEPLISPTSPL 216
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.311 0.127 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,755,346
Number of Sequences: 27539
Number of extensions: 608120
Number of successful extensions: 1686
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1678
Number of HSP's gapped (non-prelim): 34
length of query: 787
length of database: 12,573,161
effective HSP length: 87
effective length of query: 700
effective length of database: 10,177,268
effective search space: 7124087600
effective search space used: 7124087600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 63 (29.5 bits)
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