Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002106-TA|BGIBMGA002106-PA|undefined
(99 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456364-1|CAG30250.1| 948|Homo sapiens Em:AC016026.2 protein. 33 0.19
AL451164-2|CAI39991.1| 165|Homo sapiens phosphofructokinase, pl... 29 3.0
BC044577-1|AAH44577.1| 1124|Homo sapiens microtubule associated ... 28 4.0
AB110786-1|BAD83657.1| 955|Homo sapiens flavoprotein oxidoreduc... 28 4.0
AB110785-1|BAD83656.1| 976|Homo sapiens flavoprotein oxidoreduc... 28 4.0
AB018293-1|BAA34470.2| 1125|Homo sapiens KIAA0750 protein protein. 28 4.0
L28010-1|AAC37584.1| 415|Homo sapiens HnRNP F protein protein. 28 5.3
BC106008-1|AAI06009.1| 415|Homo sapiens HNRPF protein protein. 28 5.3
BC016736-1|AAH16736.1| 415|Homo sapiens HNRPF protein protein. 28 5.3
BC015580-1|AAH15580.1| 415|Homo sapiens HNRPF protein protein. 28 5.3
BC004254-1|AAH04254.1| 415|Homo sapiens heterogeneous nuclear r... 28 5.3
BC001432-1|AAH01432.1| 415|Homo sapiens heterogeneous nuclear r... 28 5.3
AL512654-2|CAI17066.1| 415|Homo sapiens heterogeneous nuclear r... 28 5.3
AK131567-1|BAD18700.1| 528|Homo sapiens protein ( Homo sapiens ... 28 5.3
AK096221-1|BAC04729.1| 464|Homo sapiens protein ( Homo sapiens ... 28 5.3
Z99572-10|CAB16748.1| 2224|Homo sapiens coagulation factor V (pr... 27 7.0
M16967-1|AAA52424.1| 2224|Homo sapiens F5 protein. 27 7.0
M14335-1|AAB59532.1| 2224|Homo sapiens F5 protein. 27 7.0
L32779-1|AAB59401.1| 2224|Homo sapiens coagulation factor V prot... 27 7.0
AY364535-1|AAQ55063.1| 2224|Homo sapiens coagulation factor V (p... 27 7.0
>CR456364-1|CAG30250.1| 948|Homo sapiens Em:AC016026.2 protein.
Length = 948
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/40 (42%), Positives = 20/40 (50%)
Query: 52 MFDHFCSAGTMKQILGLHREICATLNLIPTRLPDFYPKLK 91
+FD F A T K L +E+C L L P FY KLK
Sbjct: 15 LFDRFVQATTCKGTLKAFQELCDHLELKPKDYRSFYHKLK 54
>AL451164-2|CAI39991.1| 165|Homo sapiens phosphofructokinase,
platelet protein.
Length = 165
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 30 LKSITTKMNTGPTPPECALAAEMFDHFCSAGTMKQILGLHREICATLNLIPTRLPDFYPK 89
L+ I T+M T L F+ + SA M + G H+E+C L ++P + + P
Sbjct: 51 LEEIATQMRTHSI--NALLIIGGFEAYKSACDMAEARGRHQELCIPLCVVPATISNNVPG 108
Query: 90 LKV 92
++
Sbjct: 109 TEI 111
>BC044577-1|AAH44577.1| 1124|Homo sapiens microtubule associated
monoxygenase, calponin and LIM domain containing 2
protein.
Length = 1124
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 47 ALAAEMFDHFCSAGTMKQILGLHREICATLNLIPTRLPDFYPKLK 91
A A ++F++F A T K L + L+L P +FY KLK
Sbjct: 10 AQAGQVFENFVQASTCKGTLQAFNILTRHLDLDPLDHRNFYSKLK 54
>AB110786-1|BAD83657.1| 955|Homo sapiens flavoprotein
oxidoreductase protein.
Length = 955
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 47 ALAAEMFDHFCSAGTMKQILGLHREICATLNLIPTRLPDFYPKLK 91
A A ++F++F A T K L + L+L P +FY KLK
Sbjct: 10 AQAGQVFENFVQASTCKGTLQAFNILTRHLDLDPLDHRNFYSKLK 54
>AB110785-1|BAD83656.1| 976|Homo sapiens flavoprotein
oxidoreductase protein.
Length = 976
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 47 ALAAEMFDHFCSAGTMKQILGLHREICATLNLIPTRLPDFYPKLK 91
A A ++F++F A T K L + L+L P +FY KLK
Sbjct: 10 AQAGQVFENFVQASTCKGTLQAFNILTRHLDLDPLDHRNFYSKLK 54
>AB018293-1|BAA34470.2| 1125|Homo sapiens KIAA0750 protein
protein.
Length = 1125
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 47 ALAAEMFDHFCSAGTMKQILGLHREICATLNLIPTRLPDFYPKLK 91
A A ++F++F A T K L + L+L P +FY KLK
Sbjct: 11 AQAGQVFENFVQASTCKGTLQAFNILTRHLDLDPLDHRNFYSKLK 55
>L28010-1|AAC37584.1| 415|Homo sapiens HnRNP F protein protein.
Length = 415
Score = 27.9 bits (59), Expect = 5.3
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 10 VRARGLRL--VKREIKDNVAFSLKSITTKMNTGPTPPECALAAEMFDHFCSAGTMKQILG 67
VR RGL K EI FS I T P PE + E F F S ++ LG
Sbjct: 113 VRLRGLPFGCTKEEIVQ--FFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALG 170
Query: 68 LHRE 71
H+E
Sbjct: 171 KHKE 174
>BC106008-1|AAI06009.1| 415|Homo sapiens HNRPF protein protein.
Length = 415
Score = 27.9 bits (59), Expect = 5.3
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 10 VRARGLRL--VKREIKDNVAFSLKSITTKMNTGPTPPECALAAEMFDHFCSAGTMKQILG 67
VR RGL K EI FS I T P PE + E F F S ++ LG
Sbjct: 113 VRLRGLPFGCTKEEIVQ--FFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALG 170
Query: 68 LHRE 71
H+E
Sbjct: 171 KHKE 174
>BC016736-1|AAH16736.1| 415|Homo sapiens HNRPF protein protein.
Length = 415
Score = 27.9 bits (59), Expect = 5.3
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 10 VRARGLRL--VKREIKDNVAFSLKSITTKMNTGPTPPECALAAEMFDHFCSAGTMKQILG 67
VR RGL K EI FS I T P PE + E F F S ++ LG
Sbjct: 113 VRLRGLPFGCTKEEIVQ--FFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALG 170
Query: 68 LHRE 71
H+E
Sbjct: 171 KHKE 174
>BC015580-1|AAH15580.1| 415|Homo sapiens HNRPF protein protein.
Length = 415
Score = 27.9 bits (59), Expect = 5.3
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 10 VRARGLRL--VKREIKDNVAFSLKSITTKMNTGPTPPECALAAEMFDHFCSAGTMKQILG 67
VR RGL K EI FS I T P PE + E F F S ++ LG
Sbjct: 113 VRLRGLPFGCTKEEIVQ--FFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALG 170
Query: 68 LHRE 71
H+E
Sbjct: 171 KHKE 174
>BC004254-1|AAH04254.1| 415|Homo sapiens heterogeneous nuclear
ribonucleoprotein F protein.
Length = 415
Score = 27.9 bits (59), Expect = 5.3
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 10 VRARGLRL--VKREIKDNVAFSLKSITTKMNTGPTPPECALAAEMFDHFCSAGTMKQILG 67
VR RGL K EI FS I T P PE + E F F S ++ LG
Sbjct: 113 VRLRGLPFGCTKEEIVQ--FFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALG 170
Query: 68 LHRE 71
H+E
Sbjct: 171 KHKE 174
>BC001432-1|AAH01432.1| 415|Homo sapiens heterogeneous nuclear
ribonucleoprotein F protein.
Length = 415
Score = 27.9 bits (59), Expect = 5.3
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 10 VRARGLRL--VKREIKDNVAFSLKSITTKMNTGPTPPECALAAEMFDHFCSAGTMKQILG 67
VR RGL K EI FS I T P PE + E F F S ++ LG
Sbjct: 113 VRLRGLPFGCTKEEIVQ--FFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALG 170
Query: 68 LHRE 71
H+E
Sbjct: 171 KHKE 174
>AL512654-2|CAI17066.1| 415|Homo sapiens heterogeneous nuclear
ribonucleoprotein F protein.
Length = 415
Score = 27.9 bits (59), Expect = 5.3
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 10 VRARGLRL--VKREIKDNVAFSLKSITTKMNTGPTPPECALAAEMFDHFCSAGTMKQILG 67
VR RGL K EI FS I T P PE + E F F S ++ LG
Sbjct: 113 VRLRGLPFGCTKEEIVQ--FFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALG 170
Query: 68 LHRE 71
H+E
Sbjct: 171 KHKE 174
>AK131567-1|BAD18700.1| 528|Homo sapiens protein ( Homo sapiens
cDNA FLJ16820 fis, clone TRACH3019290, moderately
similar to Zinc finger protein 93. ).
Length = 528
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 28 FSLKSITTKMNTGPTPPECALAAEMFDHFCSAGTMKQI 65
FS + K++TG P +C + F+H CS K+I
Sbjct: 185 FSTLTTHKKIHTGGKPYKCEECGKAFNHSCSLTRHKKI 222
>AK096221-1|BAC04729.1| 464|Homo sapiens protein ( Homo sapiens
cDNA FLJ38902 fis, clone NT2NE2001049, moderately
similar to ZINC FINGER PROTEIN 85. ).
Length = 464
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 28 FSLKSITTKMNTGPTPPECALAAEMFDHFCSAGTMKQI 65
FS + K++TG P +C + F+H CS K+I
Sbjct: 109 FSTLTTHKKIHTGGKPYKCEECGKAFNHSCSLTRHKKI 146
>Z99572-10|CAB16748.1| 2224|Homo sapiens coagulation factor V
(proaccelerin, labile factor) protein.
Length = 2224
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Query: 23 KDNVAFSLKSITTKMNTGPTPPECALAAEMFD-----HFCSAGTMKQILGLH 69
+D+ F +I + +N G P FD HFCS GT +IL +H
Sbjct: 575 RDDPKFYESNIMSTIN-GYVPESITTLGFCFDDTVQWHFCSVGTQNEILTIH 625
>M16967-1|AAA52424.1| 2224|Homo sapiens F5 protein.
Length = 2224
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Query: 23 KDNVAFSLKSITTKMNTGPTPPECALAAEMFD-----HFCSAGTMKQILGLH 69
+D+ F +I + +N G P FD HFCS GT +IL +H
Sbjct: 575 RDDPKFYESNIMSTIN-GYVPESITTLGFCFDDTVQWHFCSVGTQNEILTIH 625
>M14335-1|AAB59532.1| 2224|Homo sapiens F5 protein.
Length = 2224
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Query: 23 KDNVAFSLKSITTKMNTGPTPPECALAAEMFD-----HFCSAGTMKQILGLH 69
+D+ F +I + +N G P FD HFCS GT +IL +H
Sbjct: 575 RDDPKFYESNIMSTIN-GYVPESITTLGFCFDDTVQWHFCSVGTQNEILTIH 625
>L32779-1|AAB59401.1| 2224|Homo sapiens coagulation factor V
protein.
Length = 2224
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Query: 23 KDNVAFSLKSITTKMNTGPTPPECALAAEMFD-----HFCSAGTMKQILGLH 69
+D+ F +I + +N G P FD HFCS GT +IL +H
Sbjct: 575 RDDPKFYESNIMSTIN-GYVPESITTLGFCFDDTVQWHFCSVGTQNEILTIH 625
>AY364535-1|AAQ55063.1| 2224|Homo sapiens coagulation factor V
(proaccelerin, labile factor) protein.
Length = 2224
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Query: 23 KDNVAFSLKSITTKMNTGPTPPECALAAEMFD-----HFCSAGTMKQILGLH 69
+D+ F +I + +N G P FD HFCS GT +IL +H
Sbjct: 575 RDDPKFYESNIMSTIN-GYVPESITTLGFCFDDTVQWHFCSVGTQNEILTIH 625
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.322 0.135 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,714,968
Number of Sequences: 224733
Number of extensions: 529868
Number of successful extensions: 1109
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1098
Number of HSP's gapped (non-prelim): 23
length of query: 99
length of database: 73,234,838
effective HSP length: 76
effective length of query: 23
effective length of database: 56,155,130
effective search space: 1291567990
effective search space used: 1291567990
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -