Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002105-TA|BGIBMGA002105-PA|IPR000408|Regulator of
chromosome condensation, RCC1, IPR009091|Regulator of chromosome
condensation/beta-lactamase-inhibitor protein II
(480 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46796| Best HMM Match : RCC1 (HMM E-Value=3e-14) 357 8e-99
SB_7970| Best HMM Match : RCC1 (HMM E-Value=0) 139 5e-33
SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 1e-23
SB_6739| Best HMM Match : RCC1 (HMM E-Value=1.6e-34) 100 2e-21
SB_17186| Best HMM Match : RCC1 (HMM E-Value=1.5e-19) 89 6e-18
SB_59432| Best HMM Match : MORN (HMM E-Value=9.3e-26) 83 4e-16
SB_18907| Best HMM Match : RCC1 (HMM E-Value=0) 80 3e-15
SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21) 80 3e-15
SB_5067| Best HMM Match : RCC1 (HMM E-Value=4.5e-16) 74 3e-13
SB_25012| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 8e-12
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 2e-11
SB_20583| Best HMM Match : RCC1 (HMM E-Value=6.2e-08) 64 3e-10
SB_31780| Best HMM Match : Pkinase (HMM E-Value=0) 61 2e-09
SB_2363| Best HMM Match : RCC1 (HMM E-Value=0.00041) 61 2e-09
SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 7e-09
SB_32347| Best HMM Match : RCC1 (HMM E-Value=0.00072) 48 2e-05
SB_30518| Best HMM Match : FYVE (HMM E-Value=1.2e-18) 48 2e-05
SB_29134| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 2e-04
SB_31129| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.095
SB_23006| Best HMM Match : RCC1 (HMM E-Value=0.014) 34 0.22
SB_34545| Best HMM Match : RCC1 (HMM E-Value=0.027) 33 0.51
SB_56393| Best HMM Match : CTF_NFI (HMM E-Value=0.75) 31 2.7
SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.6
SB_26483| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_32302| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.3
>SB_46796| Best HMM Match : RCC1 (HMM E-Value=3e-14)
Length = 350
Score = 357 bits (879), Expect = 8e-99
Identities = 171/348 (49%), Positives = 233/348 (66%), Gaps = 7/348 (2%)
Query: 138 RNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYACGDNKSGQCG 197
RN GQLG G T VP+++ LK NI+ A+ GR HTL +TD G V+ GDNK GQ G
Sbjct: 2 RNDKGQLGHGTTERCDVPKVIDRLKMHNIVQASCGRGHTLILTDAGLVFGFGDNKLGQIG 61
Query: 198 LGNTTPQILK-PTRIKY-NGTPIVKVGCGAEFSMILDCNGNLHSFGMPEYGQLGHNTDGK 255
G+ P L P +I + + KV CGAEFSM+LD NG++ SFG PEYGQLGHNTDG+
Sbjct: 62 QGHQKPTSLPCPLQIMHPTDKKVTKVCCGAEFSMLLDENGDIFSFGSPEYGQLGHNTDGQ 121
Query: 256 YFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKDVTIVDLSCGNNHTVAIDSMKRAFS 315
Y V+S K+ F E +P+++ ++++++KDG++ ++ V I D+ CGNNHT+A+D R F+
Sbjct: 122 YIVSSNKMGFQCEVLPRRLVVFVERNKDGFVNHIEGVKIKDVVCGNNHTMALDEQGRVFT 181
Query: 316 WGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHCGGTYSLAVNDQGALFMFGQTKR 375
WGFGG+GRLGH + KDE+VPRL+ +F+T G + G TYS+AV G L+ +GQTK+
Sbjct: 182 WGFGGYGRLGHQQPKDEHVPRLLTFFNTKG-NPSVIFAGSTYSMAV-CMGQLYFWGQTKQ 239
Query: 376 TGEANMYPKPVHDLTGWNIKSVGTSNTSIVIAADDSLIAWGVSPTYGELGMG---EINKS 432
+GEA MYPKPV DL+GW ++SVG S +SIVIAADDS+++WG SPTYGELG G KS
Sbjct: 240 SGEAAMYPKPVQDLSGWQVRSVGCSKSSIVIAADDSVVSWGPSPTYGELGYGLKKGGQKS 299
Query: 433 TAKPKEVSRMDSLGITQVAMGYSHTLLLCDNNIEEVKQKLDTIPAFEP 480
+ PK V ++ + + V G HTL + + E K L P + P
Sbjct: 300 STNPKIVEPLEDIYVHSVTCGMGHTLFIAKDVTPEDKTMLGKKPVYTP 347
Score = 55.2 bits (127), Expect = 1e-07
Identities = 64/305 (20%), Positives = 122/305 (40%), Gaps = 56/305 (18%)
Query: 110 RRYRLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSV--PELVPELKGKNII 167
+ + ++ + C GH++++++ G + FG N GQ+G G S+ P + K +
Sbjct: 26 KMHNIVQASCGRGHTLILTDAGLVFGFGDNKLGQIGQGHQKPTSLPCPLQIMHPTDKKVT 85
Query: 168 HAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKY-------------- 213
G ++ + + G +++ G + GQ G I+ ++ +
Sbjct: 86 KVCCGAEFSMLLDENGDIFSFGSPEYGQLGHNTDGQYIVSSNKMGFQCEVLPRRLVVFVE 145
Query: 214 ----------NGTPIVKVGCGAEFSMILDCNGNLHSFGMPEYGQLGH------------- 250
G I V CG +M LD G + ++G YG+LGH
Sbjct: 146 RNKDGFVNHIEGVKIKDVVCGNNHTMALDEQGRVFTWGFGGYGRLGHQQPKDEHVPRLLT 205
Query: 251 --NTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDG----YITPVKDVT---IVDLSCGN 301
NT G V ++ Q+ + Q + G Y PV+D++ + + C
Sbjct: 206 FFNTKGNPSVIFAGSTYSMAVCMGQLYFWGQTKQSGEAAMYPKPVQDLSGWQVRSVGCSK 265
Query: 302 NHTVAIDSMKRAFSWG-FGGFGRLGH----AEQKDENVPRLIKYFDTVGRGVRSVHCGGT 356
+ ++ I + SWG +G LG+ QK P++++ + + V SV CG
Sbjct: 266 S-SIVIAADDSVVSWGPSPTYGELGYGLKKGGQKSSTNPKIVEPLEDI--YVHSVTCGMG 322
Query: 357 YSLAV 361
++L +
Sbjct: 323 HTLFI 327
>SB_7970| Best HMM Match : RCC1 (HMM E-Value=0)
Length = 651
Score = 139 bits (336), Expect = 5e-33
Identities = 98/355 (27%), Positives = 174/355 (49%), Gaps = 35/355 (9%)
Query: 113 RLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVG 172
R + A H + ++ +G +++G G+LG GD + +P+ V G+ ++ + G
Sbjct: 77 RAVSMSAGAAHCLALTADGAVWSWGHGGQGRLGHGDAQHQLLPKKVEAFAGQRVVAVSAG 136
Query: 173 RHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKVGCGAEFSMILD 232
H+L +T G V++ G + G+ G GNT Q+L G +V V G S+ +
Sbjct: 137 YFHSLALTADGRVWSWGYGRDGRLGHGNTQHQLLPKKLEGLAGQRVVAVSAGIAHSLAIT 196
Query: 233 CNGNLHSFGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKDV 292
+G++ S+G +G+LGH + T+L +PK+I + D
Sbjct: 197 ADGSVWSWGWGGHGRLGHGEE------KTQL------LPKKIEAFA------------DQ 232
Query: 293 TIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVH 352
+V +S G+ H++A+ + F+WGFG GRLGH +++ + +P+ I+ F VG+ +V
Sbjct: 233 RVVAVSAGSGHSLALTADGAVFTWGFGAHGRLGHGDEQHQLLPKKIEAF--VGQRAVAVS 290
Query: 353 CGGTYSLAVNDQGALFMFGQTKR-----TGEAN-MYPKPVHDLTGWNIKSVGT-SNTSIV 405
G +SLA+ GA+ +G R E N + P V L G + +V S+ SI
Sbjct: 291 AGPRHSLAITADGAVMSWGHGHRGKLGHGDEQNQLLPNKVEALAGRRVVAVSAGSDHSIA 350
Query: 406 IAADDSLIAWGVSPTYGELGMGEINKSTAKPKEVSRMDSLGITQVAMGYSHTLLL 460
I+AD ++ +WG +G+LG G+ ++ P + + V+ G H+L +
Sbjct: 351 ISADGAVWSWG-DGDFGKLGHGD-EQNQLLPTKKEAFAGQRVVAVSAGEYHSLAI 403
Score = 138 bits (334), Expect = 9e-33
Identities = 93/346 (26%), Positives = 167/346 (48%), Gaps = 36/346 (10%)
Query: 123 HSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDT 182
HS+ ++ +G ++G G+LG GD + +P V L G+ ++ + G H++ ++
Sbjct: 295 HSLAITADGAVMSWGHGHRGKLGHGDEQNQLLPNKVEALAGRRVVAVSAGSDHSIAISAD 354
Query: 183 GCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKVGCGAEFSMILDCNGNLHSFGM 242
G V++ GD G+ G G+ Q+L + + G +V V G S+ + +G + S+G
Sbjct: 355 GAVWSWGDGDFGKLGHGDEQNQLLPTKKEAFAGQRVVAVSAGEYHSLAIIADGAVWSWGF 414
Query: 243 PEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKDVTIVDLSCGNN 302
+GQLGH + +PKQI + + +V +S G
Sbjct: 415 GYHGQLGHGDQ------------QIQLLPKQIEAFA------------GLRVVAVSAGAA 450
Query: 303 HTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHCGGTYSLAVN 362
H++AI + +SWG+G GRLGH +++D+ +P+ ++ F VG V +V G +SLA+
Sbjct: 451 HSLAITADGALWSWGYGDSGRLGHGDEQDQLLPKKVEAF--VGPHVVAVSAGAAHSLALT 508
Query: 363 DQGALFM--FGQTKRTGEAN-----MYPKPVHDLTGWNIKSVGTS-NTSIVIAADDSLIA 414
G+++ +G + R G + + PK + G + +V S + AD +L +
Sbjct: 509 ADGSVWSWGWGASGRLGHGDEQNQLLLPKKIEAFAGQRVVAVSAGLRHSGALTADGALWS 568
Query: 415 WGVSPTYGELGMGEINKSTAKPKEVSRMDSLGITQVAMGYSHTLLL 460
WG YG+LG G+ + PK+V + V+ G H+L +
Sbjct: 569 WG-EGAYGQLGHGDEQRQLL-PKKVEAFAGQRVVAVSAGAYHSLAI 612
Score = 138 bits (333), Expect = 1e-32
Identities = 97/359 (27%), Positives = 175/359 (48%), Gaps = 38/359 (10%)
Query: 107 FTDRRYRLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNI 166
F D+R + +G +GHS+ ++ +G +T+G A G+LG GD + +P+ + G+
Sbjct: 229 FADQRVVAVSAG--SGHSLALTADGAVFTWGFGAHGRLGHGDEQHQLLPKKIEAFVGQRA 286
Query: 167 IHAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIK-YNGTPIVKVGCGA 225
+ + G H+L +T G V + G G+ G G+ Q+L P +++ G +V V G+
Sbjct: 287 VAVSAGPRHSLAITADGAVMSWGHGHRGKLGHGDEQNQLL-PNKVEALAGRRVVAVSAGS 345
Query: 226 EFSMILDCNGNLHSFGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGY 285
+ S+ + +G + S+G ++G+LGH + + + K +F +
Sbjct: 346 DHSIAISADGAVWSWGDGDFGKLGHGDEQNQLLPTKKEAFAGQ----------------- 388
Query: 286 ITPVKDVTIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVG 345
+V +S G H++AI + +SWGFG G+LGH +Q+ + +P+ I+ F G
Sbjct: 389 -------RVVAVSAGEYHSLAIIADGAVWSWGFGYHGQLGHGDQQIQLLPKQIEAF--AG 439
Query: 346 RGVRSVHCGGTYSLAVNDQGALFM--FGQTKRTGEAN----MYPKPVHDLTGWNIKSVGT 399
V +V G +SLA+ GAL+ +G + R G + + PK V G ++ +V
Sbjct: 440 LRVVAVSAGAAHSLAITADGALWSWGYGDSGRLGHGDEQDQLLPKKVEAFVGPHVVAVSA 499
Query: 400 SNT-SIVIAADDSLIAWGVSPTYGELGMGEINKSTAKPKEVSRMDSLGITQVAMGYSHT 457
S+ + AD S+ +WG + G LG G+ PK++ + V+ G H+
Sbjct: 500 GAAHSLALTADGSVWSWGWGAS-GRLGHGDEQNQLLLPKKIEAFAGQRVVAVSAGLRHS 557
Score = 107 bits (258), Expect = 1e-23
Identities = 93/348 (26%), Positives = 162/348 (46%), Gaps = 40/348 (11%)
Query: 122 GHSVLVSEEGEAYTFGRNACGQLGFGDTVTR-SVPELVPE-LKGKNIIHAAVGRHHTLFV 179
G +++V G+ R++ G + VTR + P +P L G+ + + G H L +
Sbjct: 35 GAALVVRLTGDLALLSRDSSGTX---EGVTRLNTPTRLPSPLGGERAVSMSAGAAHCLAL 91
Query: 180 TDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKVGCGAEFSMILDCNGNLHS 239
T G V++ G G+ G G+ Q+L + G +V V G S+ L +G + S
Sbjct: 92 TADGAVWSWGHGGQGRLGHGDAQHQLLPKKVEAFAGQRVVAVSAGYFHSLALTADGRVWS 151
Query: 240 FGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKDVTIVDLSC 299
+G G+LGH + + +PK++ +G + +V +S
Sbjct: 152 WGYGRDGRLGHG------------NTQHQLLPKKL--------EG----LAGQRVVAVSA 187
Query: 300 GNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHCGGTYSL 359
G H++AI + +SWG+GG GRLGH E+K + +P+ I+ F + V +V G +SL
Sbjct: 188 GIAHSLAITADGSVWSWGWGGHGRLGHGEEKTQLLPKKIEAF--ADQRVVAVSAGSGHSL 245
Query: 360 AVNDQGALFM--FGQTKRTGEAN----MYPKPVHDLTGWNIKSVGTS-NTSIVIAADDSL 412
A+ GA+F FG R G + + PK + G +V S+ I AD ++
Sbjct: 246 ALTADGAVFTWGFGAHGRLGHGDEQHQLLPKKIEAFVGQRAVAVSAGPRHSLAITADGAV 305
Query: 413 IAWGVSPTYGELGMGEINKSTAKPKEVSRMDSLGITQVAMGYSHTLLL 460
++WG G+LG G+ ++ P +V + + V+ G H++ +
Sbjct: 306 MSWGHGHR-GKLGHGD-EQNQLLPNKVEALAGRRVVAVSAGSDHSIAI 351
Score = 107 bits (257), Expect = 2e-23
Identities = 68/260 (26%), Positives = 127/260 (48%), Gaps = 25/260 (9%)
Query: 113 RLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVG 172
R++ HS+ + +G +++G GQLG GD + +P+ + G ++ + G
Sbjct: 389 RVVAVSAGEYHSLAIIADGAVWSWGFGYHGQLGHGDQQIQLLPKQIEAFAGLRVVAVSAG 448
Query: 173 RHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKVGCGAEFSMILD 232
H+L +T G +++ G SG+ G G+ Q+L + G +V V GA S+ L
Sbjct: 449 AAHSLAITADGALWSWGYGDSGRLGHGDEQDQLLPKKVEAFVGPHVVAVSAGAAHSLALT 508
Query: 233 CNGNLHSFGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKDV 292
+G++ S+G G+LGH + + +PK+I + +
Sbjct: 509 ADGSVWSWGWGASGRLGHGDEQNQLL-----------LPKKIEAFAGQR----------- 546
Query: 293 TIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVH 352
+V +S G H+ A+ + +SWG G +G+LGH +++ + +P+ ++ F G+ V +V
Sbjct: 547 -VVAVSAGLRHSGALTADGALWSWGEGAYGQLGHGDEQRQLLPKKVEAF--AGQRVVAVS 603
Query: 353 CGGTYSLAVNDQGALFMFGQ 372
G +SLA++ GA +GQ
Sbjct: 604 AGAYHSLAISADGAFLTWGQ 623
Score = 94.3 bits (224), Expect = 2e-19
Identities = 63/229 (27%), Positives = 112/229 (48%), Gaps = 26/229 (11%)
Query: 113 RLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVG 172
R++ A HS+ ++ +G +++G G+LG GD + +P+ V G +++ + G
Sbjct: 441 RVVAVSAGAAHSLAITADGALWSWGYGDSGRLGHGDEQDQLLPKKVEAFVGPHVVAVSAG 500
Query: 173 RHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIK-YNGTPIVKVGCGAEFSMIL 231
H+L +T G V++ G SG+ G G+ Q+L P +I+ + G +V V G S L
Sbjct: 501 AAHSLALTADGSVWSWGWGASGRLGHGDEQNQLLLPKKIEAFAGQRVVAVSAGLRHSGAL 560
Query: 232 DCNGNLHSFGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKD 291
+G L S+G YGQLGH + + + +PK++ + +
Sbjct: 561 TADGALWSWGEGAYGQLGHGDEQR------------QLLPKKVEAFAGQ----------- 597
Query: 292 VTIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQ-KDENVPRLIK 339
+V +S G H++AI + +WG G G LGH E D+ +P+ ++
Sbjct: 598 -RVVAVSAGAYHSLAISADGAFLTWGQGEDGCLGHGEDLSDQLLPKKVE 645
>SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3592
Score = 107 bits (258), Expect = 1e-23
Identities = 90/347 (25%), Positives = 159/347 (45%), Gaps = 47/347 (13%)
Query: 127 VSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAV--GRHHTLFVTDTGC 184
V+ EG+ Y G G+LG G T T + +++ L+ + AV G H + ++ G
Sbjct: 2428 VTAEGKVYATGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGD 2487
Query: 185 VYACGDNKSGQCGLGNTT----PQILKPTRIKYNGTPIVKVGCGAEFSMILDCNGNLHSF 240
VY+ G+ G+ G GN P++++ R G ++ + CG S + N L+++
Sbjct: 2488 VYSWGEGDDGKLGHGNRNSCDRPRVIEALR----GKGVIDISCGGSHSACITQNHELYTW 2543
Query: 241 GMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKDVTIVDLSCG 300
G YG+LGH + +PK + ++ ++D++CG
Sbjct: 2544 GKGRYGRLGHGDSED------------QLLPK------------VVEALRGNRVIDVACG 2579
Query: 301 NN--HTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHCGGTYS 358
+ T+ + +SWG G +G+LG +P +K +G GV V CG +S
Sbjct: 2580 SGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIP--MKVESLIGLGVSKVECGSQFS 2637
Query: 359 LAVNDQGALFMFGQTK--RTGEAN----MYPKPVHDLTGWNIKSVGTSNTSIVIAADDSL 412
+A+ GA++ +G+ R G PK V L G + ++ T + V + D
Sbjct: 2638 VALTRSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDTGE 2697
Query: 413 I-AWGVSPTYGELGMGEINKSTAKPKEVSRMDSLGITQVAMGYSHTL 458
+ WG + G+LG G N + A+P+ V+ + I++VA G +HT+
Sbjct: 2698 VYTWGDNDE-GQLGDGTTN-AIARPRLVTALQGKKISRVACGSAHTI 2742
Score = 103 bits (247), Expect = 3e-22
Identities = 89/353 (25%), Positives = 160/353 (45%), Gaps = 44/353 (12%)
Query: 127 VSEEGEAYTFGRNACGQLGFGD-----TVTRSVPELVPELKGKNIIHAAVGRHHTLFVTD 181
VS +G+ + G + G+LG G TV R + L + K +H+ G H + +T
Sbjct: 1482 VSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHS--GGRHAMALTI 1539
Query: 182 TGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKVGCGAEFSMILDCNGNLHSFG 241
G +++ G+ + G+ G GN + + + + CG+ S + +G L+++G
Sbjct: 1540 EGKLFSWGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWG 1599
Query: 242 MPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKDVTIVDLSCGN 301
+ EYG+LGH + T K PK++ + ++D++CG+
Sbjct: 1600 LGEYGRLGHGDN----YTHLK--------PKKVQSFTSH------------RVIDIACGS 1635
Query: 302 N--HTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHCGGTYSL 359
T+A+ +SWG G FG+LG + +VP ++ G+GV V CG +SL
Sbjct: 1636 RDAQTLALTDDGTVWSWGDGDFGKLGRGGSEGCSVPNPVEKLQ--GQGVCKVACGAQFSL 1693
Query: 360 AVNDQGALFMFGQTK--RTGEAN----MYPKPVHDLTGWNIKSVGTSNTSIVIAADD-SL 412
A++ G ++ +G+ R G N P+ V L G I V + D +
Sbjct: 1694 ALSTSGLVWTWGKGDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQV 1753
Query: 413 IAWGVSPTYGELGMGEINKSTAKPKEVSRMDSLGITQVAMGYSHTLLLCDNNI 465
AWG +G+ G +P+ V+ ++ IT+VA G SH++ ++++
Sbjct: 1754 FAWG-DNDHGQQG-NNTTTVNRRPQLVNGLEGQKITRVACGSSHSIAWAESDL 1804
Score = 101 bits (243), Expect = 1e-21
Identities = 99/350 (28%), Positives = 154/350 (44%), Gaps = 44/350 (12%)
Query: 129 EEGE--AYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF-VTDTGCV 185
+EG+ + +G N QLG VP L E G + G TLF V+ G V
Sbjct: 1430 QEGQIKVFVWGLNDKDQLGGLKGSKIKVPVL-SEFIGALKVQQIAGGSKTLFAVSHDGKV 1488
Query: 186 YACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVK---VGCGAEFSMILDCNGNLHSFGM 242
+ACG++ +G+ GLG + + P +I+ + +V+ V G +M L G L S+G
Sbjct: 1489 FACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWGE 1548
Query: 243 PEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKDVTIVDLSCGNN 302
E G+LGH +++ PK I + K + D+SCG++
Sbjct: 1549 GEDGKLGHGN---------RMNCDH---PKLIDTF------------KSSCVRDMSCGSS 1584
Query: 303 HTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHCGG--TYSLA 360
H+ AI S ++WG G +GRLGH + P+ ++ F V + CG +LA
Sbjct: 1585 HSAAILSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQSF--TSHRVIDIACGSRDAQTLA 1642
Query: 361 VNDQGALFM-----FGQTKRTG-EANMYPKPVHDLTGWNIKSVGT-SNTSIVIAADDSLI 413
+ D G ++ FG+ R G E P PV L G + V + S+ ++ +
Sbjct: 1643 LTDDGTVWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLVW 1702
Query: 414 AWGVSPTYGELGMGEINKSTAKPKEVSRMDSLGITQVAMGYSHTLLLCDN 463
WG Y LG G + KP+ V + I VA+G H L + D+
Sbjct: 1703 TWGKGDYY-RLGHGN-DTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDS 1750
Score = 98.7 bits (235), Expect = 9e-21
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 28/244 (11%)
Query: 119 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRH--HT 176
C + HS + GE YT+G G+LG GD T P+ V +I A G T
Sbjct: 1581 CGSSHSAAILSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQT 1640
Query: 177 LFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKVGCGAEFSMILDCNGN 236
L +TD G V++ GD G+ G G + + K G + KV CGA+FS+ L +G
Sbjct: 1641 LALTDDGTVWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGL 1700
Query: 237 LHSFGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKDVTIVD 296
+ ++G +Y +LGH D +++K + + ++ IVD
Sbjct: 1701 VWTWGKGDYYRLGHGND----------------------THVRKPQ--IVDGLRGKKIVD 1736
Query: 297 LSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHCGGT 356
++ G H +A+ + F+WG G+ G+ P+L+ + G+ + V CG +
Sbjct: 1737 VAVGALHCLAVTDSGQVFAWGDNDHGQQGNNTTTVNRRPQLVNGLE--GQKITRVACGSS 1794
Query: 357 YSLA 360
+S+A
Sbjct: 1795 HSIA 1798
Score = 97.1 bits (231), Expect = 3e-20
Identities = 67/244 (27%), Positives = 114/244 (46%), Gaps = 28/244 (11%)
Query: 119 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGR--HHT 176
C HS +++ E YT+G+ G+LG GD+ + +P++V L+G +I A G T
Sbjct: 2526 CGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQT 2585
Query: 177 LFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKVGCGAEFSMILDCNGN 236
L +TD CV++ GD G+ G G + + G + KV CG++FS+ L +G
Sbjct: 2586 LCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGA 2645
Query: 237 LHSFGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKDVTIVD 296
++++G +Y +LGH D H PK++ +Q K ++
Sbjct: 2646 VYTWGKGDYYRLGHGVDD-----------HVRR-PKRVAA-LQGKK-----------VIT 2681
Query: 297 LSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHCGGT 356
++ G+ H VA ++WG G+LG PRL+ G+ + V CG
Sbjct: 2682 IATGSLHCVASTDTGEVYTWGDNDEGQLGDGTTNAIARPRLVTALQ--GKKISRVACGSA 2739
Query: 357 YSLA 360
+++A
Sbjct: 2740 HTIA 2743
Score = 90.6 bits (215), Expect = 2e-18
Identities = 86/344 (25%), Positives = 144/344 (41%), Gaps = 41/344 (11%)
Query: 131 GEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF-VTDTGCVYACG 189
G Y +G N GQLG + +P+ + L + VG TLF VT G VYA G
Sbjct: 2380 GTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPVQI-VGGEQTLFAVTAEGKVYATG 2438
Query: 190 DNKSGQCGLG--NTTPQILKPTRIKYNGTPIVKVGCGAEFSMILDCNGNLHSFGMPEYGQ 247
G+ GLG +T I +++ V V G + +M L +G+++S+
Sbjct: 2439 YGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSW------- 2491
Query: 248 LGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKDVTIVDLSCGNNHTVAI 307
G DGK + + I ++ ++D+SCG +H+ I
Sbjct: 2492 -GEGDDGKLGHGNRNSC----------------DRPRVIEALRGKGVIDISCGGSHSACI 2534
Query: 308 DSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHCGG--TYSLAVNDQG 365
++WG G +GRLGH + +D+ +P++++ G V V CG +L + D
Sbjct: 2535 TQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALR--GNRVIDVACGSGDAQTLCLTDDD 2592
Query: 366 ALFM-----FGQTKRTG-EANMYPKPVHDLTGWNIKSVGT-SNTSIVIAADDSLIAWGVS 418
++ +G+ R G + P V L G + V S S+ + ++ WG
Sbjct: 2593 CVWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKG 2652
Query: 419 PTYGELGMGEINKSTAKPKEVSRMDSLGITQVAMGYSHTLLLCD 462
Y LG G ++ +PK V+ + + +A G H + D
Sbjct: 2653 DYY-RLGHG-VDDHVRRPKRVAALQGKKVITIATGSLHCVASTD 2694
Score = 83.8 bits (198), Expect = 3e-16
Identities = 63/252 (25%), Positives = 119/252 (47%), Gaps = 30/252 (11%)
Query: 123 HSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDT 182
H++ +S +G+ Y++G G+LG G+ + P ++ L+GK +I + G H+ +T
Sbjct: 2478 HAMALSADGDVYSWGEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISCGGSHSACITQN 2537
Query: 183 GCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKVGCGA--EFSMILDCNGNLHSF 240
+Y G + G+ G G++ Q+L G ++ V CG+ ++ L + + S+
Sbjct: 2538 HELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSW 2597
Query: 241 GMPEYGQLGH-NTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKDVTIVDLSC 299
G +YG+LG +DG K+ E++ I L + K + C
Sbjct: 2598 GDGDYGKLGRGGSDG------CKIPMKVESL---IGLGVSK----------------VEC 2632
Query: 300 GNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHCGGTYSL 359
G+ +VA+ ++WG G + RLGH D++V R + G+ V ++ G + +
Sbjct: 2633 GSQFSVALTRSGAVYTWGKGDYYRLGHG--VDDHVRRPKRVAALQGKKVITIATGSLHCV 2690
Query: 360 AVNDQGALFMFG 371
A D G ++ +G
Sbjct: 2691 ASTDTGEVYTWG 2702
Score = 68.5 bits (160), Expect = 1e-11
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 3/181 (1%)
Query: 74 VLMIAGLVSWDLTAR-RDNNPTKRTHPNLYTFHKFTDRRYRLIVSGCTAGHSVLVSEEGE 132
+L L +W L R + TH FT R I G ++ ++++G
Sbjct: 1589 ILSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGT 1648
Query: 133 AYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYACGDNK 192
+++G G+LG G + SVP V +L+G+ + A G +L ++ +G V+ G
Sbjct: 1649 VWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGD 1708
Query: 193 SGQCGLGNTTPQILKPTRIK-YNGTPIVKVGCGAEFSMILDCNGNLHSFGMPEYGQLGHN 251
+ G GN T + KP + G IV V GA + + +G + ++G ++GQ G+N
Sbjct: 1709 YYRLGHGNDT-HVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQGNN 1767
Query: 252 T 252
T
Sbjct: 1768 T 1768
Score = 39.9 bits (89), Expect = 0.004
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 314 FSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHCGGTYSL-AVNDQGALFM--F 370
+ WG G+LG E +P+ I+ ++ R V+ V GG +L AV +G ++ +
Sbjct: 2383 YGWGHNHRGQLGSLEGAKVKLPQTIEALASI-RPVQIV--GGEQTLFAVTAEGKVYATGY 2439
Query: 371 GQTKRTG----EANMYPKPVHDLTGWNIKSVGTSNT---SIVIAADDSLIAWGVSPTYGE 423
G R G + K + L ++ V + ++ ++AD + +WG G+
Sbjct: 2440 GHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDD-GK 2498
Query: 424 LGMGEINKSTAKPKEVSRMDSLGITQVAMGYSHTLLLCDNN 464
LG G N S +P+ + + G+ ++ G SH+ + N+
Sbjct: 2499 LGHGNRN-SCDRPRVIEALRGKGVIDISCGGSHSACITQNH 2538
>SB_6739| Best HMM Match : RCC1 (HMM E-Value=1.6e-34)
Length = 1790
Score = 100 bits (240), Expect = 2e-21
Identities = 76/250 (30%), Positives = 118/250 (47%), Gaps = 28/250 (11%)
Query: 113 RLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVG 172
++I C + HS V+ EGE YT+GR G+LG G + + VP LV L+G +II A G
Sbjct: 596 QVIRISCGSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACG 655
Query: 173 R--HHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKVGCGAEFSMI 230
HTL D G V++ GD G+ G G + + + G + KV CGA+FS+
Sbjct: 656 SGDAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLA 715
Query: 231 LDCNGNLHSFGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVK 290
L +G++ ++G E +LGH T+ H PK + ++ DG
Sbjct: 716 LTRDGSVWTWGKGEGFRLGHGTED-----------HVRH-PKLV-----EALDG------ 752
Query: 291 DVTIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRS 350
+VD+S G+ H +A+ + WG G+LG + + P L+ +G+
Sbjct: 753 -KHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQLGDIDCQIRPEPTLVS--GLASKGIVG 809
Query: 351 VHCGGTYSLA 360
+ CG S A
Sbjct: 810 IACGPAQSFA 819
Score = 93.1 bits (221), Expect = 4e-19
Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 30/261 (11%)
Query: 115 IVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRH 174
+V+ H + ++ EGE Y++G G+LG GDT R P LV L GK +I + G
Sbjct: 546 VVTHTDGKHFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGST 605
Query: 175 HTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKVGCGAEFSMILDC- 233
H+ VT G +Y G G+ G G++ Q++ G I+ V CG+ + L
Sbjct: 606 HSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAA 665
Query: 234 -NGNLHSFGMPEYGQLGH-NTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKD 291
+G + S+G +YG+LG +DG PK I ++
Sbjct: 666 DDGTVWSWGDGDYGKLGRGGSDGC-------------KNPKSI------------ERLQG 700
Query: 292 VTIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSV 351
+ + + CG ++A+ ++WG G RLGH + P+L++ D G+ V V
Sbjct: 701 LGVCKVYCGAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALD--GKHVVDV 758
Query: 352 HCGGTYSLAVNDQGALFMFGQ 372
G + LA+ D G ++ +G+
Sbjct: 759 SVGSIHCLALTDAGEVYCWGR 779
Score = 77.4 bits (182), Expect = 2e-14
Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 303 HTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHCGGTYSLAVN 362
H +A+ +SWG G G+LGH + P L+ G+ V + CG T+S AV
Sbjct: 554 HFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVT--GLAGKQVIRISCGSTHSAAVT 611
Query: 363 DQGALFMFGQTK--RTG----EANMYPKPVHDLTGWNIKSV--GTSNTSIVIAADDSLI- 413
+G L+ +G+ R G E + P V L G +I V G+ + + AADD +
Sbjct: 612 SEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVW 671
Query: 414 AWGVSPTYGELGMGEINKSTAKPKEVSRMDSLGITQVAMGYSHTLLL 460
+WG YG+LG G + PK + R+ LG+ +V G +L L
Sbjct: 672 SWG-DGDYGKLGRGG-SDGCKNPKSIERLQGLGVCKVYCGAQFSLAL 716
Score = 77.4 bits (182), Expect = 2e-14
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 13/186 (6%)
Query: 286 ITPVKDVTIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVG 345
+T + ++ +SCG+ H+ A+ S ++WG G +GRLGH +D+ VP L+ G
Sbjct: 589 VTGLAGKQVIRISCGSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVS--GLRG 646
Query: 346 RGVRSVHCGG--TYSLAVNDQGALFM-----FGQTKRTG-EANMYPKPVHDLTGWNI-KS 396
+ V CG ++LA D G ++ +G+ R G + PK + L G + K
Sbjct: 647 HHIIDVACGSGDAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKV 706
Query: 397 VGTSNTSIVIAADDSLIAWGVSPTYGELGMGEINKSTAKPKEVSRMDSLGITQVAMGYSH 456
+ S+ + D S+ WG + LG G PK V +D + V++G H
Sbjct: 707 YCGAQFSLALTRDGSVWTWGKGEGF-RLGHG-TEDHVRHPKLVEALDGKHVVDVSVGSIH 764
Query: 457 TLLLCD 462
L L D
Sbjct: 765 CLALTD 770
Score = 62.5 bits (145), Expect = 7e-10
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 119 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF 178
C A S+ ++ +G +T+G+ +LG G P+LV L GK+++ +VG H L
Sbjct: 708 CGAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLA 767
Query: 179 VTDTGCVYACGDNKSGQCGLGNTTPQIL-KPTRIK-YNGTPIVKVGCGAEFSMILDCNG 235
+TD G VY G N GQ LG+ QI +PT + IV + CG S C G
Sbjct: 768 LTDAGEVYCWGRNDQGQ--LGDIDCQIRPEPTLVSGLASKGIVGIACGPAQSFAWSCAG 824
>SB_17186| Best HMM Match : RCC1 (HMM E-Value=1.5e-19)
Length = 637
Score = 89.4 bits (212), Expect = 6e-18
Identities = 78/316 (24%), Positives = 143/316 (45%), Gaps = 54/316 (17%)
Query: 172 GRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKVGCGAEFS--- 228
G++ T + G V+ACG G+ GLG++T Q + R+ ++ +VK ++ S
Sbjct: 338 GQYCTFVIFPDGFVHACGKGSYGRLGLGDSTNQT-QLKRLNFDNECLVKSVSSSKGSDGH 396
Query: 229 -MILDCNGNLHSFGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYIT 287
+ L +G ++S+G +YG+LGH + IPK + +G +
Sbjct: 397 TLALTLDGKVYSWGDGDYGKLGHGNS------------QTQKIPKLV--------EGALG 436
Query: 288 PVKDVTIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLG-----------HAEQKDENVPR 336
+ + ++ G H+ A+ ++WG G +GRLG H + NVP
Sbjct: 437 ---NKVVCCIAAGYRHSAAVTEDGELYTWGEGDYGRLGSCHSIARPVSGHGDNNSRNVPV 493
Query: 337 LIKYFDTVGRGV--------RSVHCGGTYSLAVNDQGALFMFGQTKRTGEANM-----YP 383
+K VG+ + R V CG SLA+ G ++++G G ++ P
Sbjct: 494 QVKDVANVGQVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTGSVDATSATP 553
Query: 384 KPVHDLTGWNIKSVGTSNTSIV-IAADDSLIAWGVSPTYGELGMGEINKSTAKPKEVSRM 442
K + L ++ + ++ V + D+++ AWG + + G+ G G KPK+V +
Sbjct: 554 KLLLALQSHSVVDISVGDSHCVALTQDNNVYAWG-NNSMGQCGQGHCTTPITKPKKVLGL 612
Query: 443 DSLGITQVAMGYSHTL 458
D + + Q++ G SHT+
Sbjct: 613 DGVAVHQISAGTSHTV 628
Score = 62.1 bits (144), Expect = 1e-09
Identities = 65/276 (23%), Positives = 119/276 (43%), Gaps = 56/276 (20%)
Query: 220 KVGCGAEFSMILDCNGNLHSFGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQ 279
++ G + ++ +G +H+ G YG+LG D +L+F E + K ++
Sbjct: 334 QIEAGQYCTFVIFPDGFVHACGKGSYGRLGLG-DSTNQTQLKRLNFDNECLVKSVSS--S 390
Query: 280 KSKDGYITPVKDVTIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIK 339
K DG HT+A+ + +SWG G +G+LGH + + +P+L++
Sbjct: 391 KGSDG------------------HTLALTLDGKVYSWGDGDYGKLGHGNSQTQKIPKLVE 432
Query: 340 YFDTVG-RGVRSVHCGGTYSLAVNDQGALFMFGQTK--RTGEANMYPKPVHD-------- 388
+G + V + G +S AV + G L+ +G+ R G + +PV
Sbjct: 433 --GALGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDYGRLGSCHSIARPVSGHGDNNSRN 490
Query: 389 -----------------LTGWNIKSVGT-SNTSIVIAADDSLIAWGVSPTYGELGMGEIN 430
L G I+ V S S+ + + + WG P+ LG G ++
Sbjct: 491 VPVQVKDVANVGQVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPS---LGTGSVD 547
Query: 431 KSTAKPKEVSRMDSLGITQVAMGYSHTLLLC-DNNI 465
++A PK + + S + +++G SH + L DNN+
Sbjct: 548 ATSATPKLLLALQSHSVVDISVGDSHCVALTQDNNV 583
Score = 60.9 bits (141), Expect = 2e-09
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 119 CTAGHSVLVSEEGEAYTFGRNACG-QLGFGDT-VTRSVPELVPELKGKNIIHAAVGRHHT 176
C + S+ ++ G+ Y +G CG LG G T + P+L+ L+ +++ +VG H
Sbjct: 518 CGSQCSLALTSTGQVYVWG---CGPSLGTGSVDATSATPKLLLALQSHSVVDISVGDSHC 574
Query: 177 LFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRI-KYNGTPIVKVGCGAEFSM 229
+ +T VYA G+N GQCG G+ T I KP ++ +G + ++ G ++
Sbjct: 575 VALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTV 628
Score = 59.7 bits (138), Expect = 5e-09
Identities = 63/292 (21%), Positives = 128/292 (43%), Gaps = 23/292 (7%)
Query: 126 LVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVP---ELKGKNIIHAAVGRHHTLFVTDT 182
++ +G + G+ + G+LG GD+ ++ + + E K++ + HTL +T
Sbjct: 344 VIFPDGFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSDGHTLALTLD 403
Query: 183 GCVYACGDNKSGQCGLGNT-TPQILKPTRIKYNGTPIVKVGCGAEFSMILDCNGNLHSFG 241
G VY+ GD G+ G GN+ T +I K + + G S + +G L+++G
Sbjct: 404 GKVYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWG 463
Query: 242 MPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQ--KSKDGYITPVKDVTIVDLSC 299
+YG+L G + +S H + + + + ++ + I ++ + I + C
Sbjct: 464 EGDYGRL-----GSCHSIARPVSGHGDNNSRNVPVQVKDVANVGQVIEALQGMVIRKVCC 518
Query: 300 GNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHCGGTYSL 359
G+ ++A+ S + + WG G G + P+L+ + V + G ++ +
Sbjct: 519 GSQCSLALTSTGQVYVWGCGPSLGTGSVDATSA-TPKLLLALQS--HSVVDISVGDSHCV 575
Query: 360 AVNDQGALFMFGQTK--RTGEAN-----MYPKPVHDLTGWNIK--SVGTSNT 402
A+ ++ +G + G+ + PK V L G + S GTS+T
Sbjct: 576 ALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHT 627
Score = 57.2 bits (132), Expect = 3e-08
Identities = 47/242 (19%), Positives = 103/242 (42%), Gaps = 10/242 (4%)
Query: 122 GHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHA-AVGRHHTLFVT 180
GH++ ++ +G+ Y++G G+LG G++ T+ +P+LV G ++ A G H+ VT
Sbjct: 395 GHTLALTLDGKVYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVT 454
Query: 181 DTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKVGCGAEFSMILDCNGN--LH 238
+ G +Y G+ G+ G ++ + + + V+V A +++ +
Sbjct: 455 EDGELYTWGEGDYGRLGSCHSIARPVSGHGDNNSRNVPVQVKDVANVGQVIEALQGMVIR 514
Query: 239 SFGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKDVTIVDLS 298
L + G+ +V S ++ + + ++ ++VD+S
Sbjct: 515 KVCCGSQCSLALTSTGQVYVWGCGPSLGTGSVD------ATSATPKLLLALQSHSVVDIS 568
Query: 299 CGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHCGGTYS 358
G++H VA+ ++WG G+ G + + K G V + G +++
Sbjct: 569 VGDSHCVALTQDNNVYAWGNNSMGQCGQGHCTTP-ITKPKKVLGLDGVAVHQISAGTSHT 627
Query: 359 LA 360
+A
Sbjct: 628 VA 629
>SB_59432| Best HMM Match : MORN (HMM E-Value=9.3e-26)
Length = 1362
Score = 83.4 bits (197), Expect = 4e-16
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 13/217 (5%)
Query: 151 TRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTR 210
T P++ P I A+G HT+ +T V+A GDN GQ G G+ + P +
Sbjct: 23 TSPEPKISPLSLPHGISKVALGTAHTVLLTFNHEVFAFGDNNFGQLGFGDRNRR-RDPAK 81
Query: 211 IKY-NGTPIVKVGCGAEFSMILDCNGNLHSFGMPEYGQLG-HNTDGKYFVTS-TKLSFHF 267
+ + G +V + CG + S++L NG +++G GQ G D V + TK++F
Sbjct: 82 LPFFEGKRVVDIACGGQHSVVLLDNGETYAWGDSSSGQCGIGKCDNNSAVDAPTKVAFTP 141
Query: 268 ETIPKQITLYIQKSKDGYITPVKDVTIVDLSCGNNHTVAIDSMKRAFSWGFG---GFGRL 324
E Q ++ + K DV I ++CG+ HT+A+ S ++WG G G G L
Sbjct: 142 EMKSPQSVFHLSEEKHETQPQATDVKIKSIACGDCHTLALSSRGTVWAWGLGCQTGHGSL 201
Query: 325 GHAEQKDENVPRLIKYFDTVGRGVRSVHCGGTYSLAV 361
+ + V L K + +G + CG +S+A+
Sbjct: 202 NSIVSRPKMVEAL-KDKEVIG-----IICGAYHSIAL 232
Score = 77.8 bits (183), Expect = 2e-14
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 123 HSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDT 182
H+VL++ E + FG N GQLGFGD R P +P +GK ++ A G H++ + D
Sbjct: 47 HTVLLTFNHEVFAFGDNNFGQLGFGDRNRRRDPAKLPFFEGKRVVDIACGGQHSVVLLDN 106
Query: 183 GCVYACGDNKSGQCGLG--NTTPQILKPTRIKYNGTPIVK 220
G YA GD+ SGQCG+G + + PT++ + TP +K
Sbjct: 107 GETYAWGDSSSGQCGIGKCDNNSAVDAPTKVAF--TPEMK 144
Score = 46.4 bits (105), Expect = 5e-05
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 294 IVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHC 353
I ++ G HTV + F++G FG+LG ++ P + +F+ G+ V + C
Sbjct: 38 ISKVALGTAHTVLLTFNHEVFAFGDNNFGQLGFGDRNRRRDPAKLPFFE--GKRVVDIAC 95
Query: 354 GGTYSLAVNDQGALFMFGQT 373
GG +S+ + D G + +G +
Sbjct: 96 GGQHSVVLLDNGETYAWGDS 115
Score = 38.7 bits (86), Expect = 0.010
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 113 RLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPE------LVPELKG-KN 165
R++ C HSV++ + GE Y +G ++ GQ G G S + PE+K ++
Sbjct: 89 RVVDIACGGQHSVVLLDNGETYAWGDSSSGQCGIGKCDNNSAVDAPTKVAFTPEMKSPQS 148
Query: 166 IIHAAVGRHHTL-FVTDTGC-VYACGD 190
+ H + +H T TD ACGD
Sbjct: 149 VFHLSEEKHETQPQATDVKIKSIACGD 175
Score = 33.9 bits (74), Expect = 0.29
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 390 TGWNIKSVGTSNT-SIVIAADDSLIAWGVSPTYGELGMGEINKSTAKPKEVSRMDSLGIT 448
T IKS+ + ++ +++ ++ AWG+ + G G +N ++PK V + +
Sbjct: 164 TDVKIKSIACGDCHTLALSSRGTVWAWGLGC---QTGHGSLNSIVSRPKMVEALKDKEVI 220
Query: 449 QVAMGYSHTLLLCDNNIEEVK 469
+ G H++ L +N E+K
Sbjct: 221 GIICGAYHSIALITDNTMEIK 241
Score = 29.1 bits (62), Expect = 8.3
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 422 GELGMGEINKSTAKPKEVSRMD-SLGITQVAMGYSHTLLLCDNN 464
GE G+ +ST+ ++S + GI++VA+G +HT+LL N+
Sbjct: 12 GEKGIAFFWQSTSPEPKISPLSLPHGISKVALGTAHTVLLTFNH 55
>SB_18907| Best HMM Match : RCC1 (HMM E-Value=0)
Length = 444
Score = 80.2 bits (189), Expect = 3e-15
Identities = 68/264 (25%), Positives = 119/264 (45%), Gaps = 35/264 (13%)
Query: 123 HSVLVSEEGEAYTFG--RNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVT 180
H+ +S++G Y +G R+A GQ+G + P ++ + II A G HT +T
Sbjct: 149 HTAALSDQGTVYAWGTYRDASGQIGLQPDGVKKKPAVILTSESDRIIKIASGNDHTAALT 208
Query: 181 DTGCVYACGDNKSGQCGL----------GNTTPQILKPTRIK-YNGTPIVKVGCGAEFSM 229
+G ++ G + GQ G IL+P ++ G V CG+ +
Sbjct: 209 TSGNLFTLGCAEQGQLGRVKECFSARGGRRGLAYILEPALVRSKKGLKFKDVFCGSFATF 268
Query: 230 ILDCNG-NLHSFGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITP 288
++ G +++++G+ YGQLG T ++HF K ++ + KD +IT
Sbjct: 269 VVAKTGSDVYAWGLNNYGQLG---------TGDVQTWHFPVKVKSLSQLNKSEKDKHIT- 318
Query: 289 VKDVTIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAE-QKDENVPRLIKYFDTVGRG 347
++ G +HT+ D + ++ G +GRLG + K+ +P I D
Sbjct: 319 --------IANGQHHTIVCDPNGKVYALGRADYGRLGLGDGAKETALPAHITSLD--NEV 368
Query: 348 VRSVHCGGTYSLAVNDQGALFMFG 371
+ V CG S AV+D+G L+ +G
Sbjct: 369 IEKVACGECVSFAVSDKGELYSWG 392
Score = 78.2 bits (184), Expect = 1e-14
Identities = 82/361 (22%), Positives = 147/361 (40%), Gaps = 38/361 (10%)
Query: 123 HSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGK----NIIHAAVGRHHTLF 178
H+V +S++G+ YT+G N G LG +T + E P + NI+ + G HT
Sbjct: 94 HTVALSKDGKVYTWGCNDDGALG-RETTSEGEEEFQPGVVSMPDDVNIVMVSAGDSHTAA 152
Query: 179 VTDTGCVYACGD--NKSGQCGLGNTTPQILKPTRIKYNGTPIVKVGCGAEFSMILDCNGN 236
++D G VYA G + SGQ GL + + I+K+ G + + L +GN
Sbjct: 153 LSDQGTVYAWGTYRDASGQIGLQPDGVKKKPAVILTSESDRIIKIASGNDHTAALTTSGN 212
Query: 237 LHSFGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKDVTIVD 296
L + G E GQLG K F + + ++ + + K + D
Sbjct: 213 LFTLGCAEQGQLGR----------VKECFSARGGRRGLAYILEPA---LVRSKKGLKFKD 259
Query: 297 LSCGNNHT-VAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHC-- 353
+ CG+ T V + ++WG +G+LG + + + P +K + + + H
Sbjct: 260 VFCGSFATFVVAKTGSDVYAWGLNNYGQLGTGDVQTWHFPVKVKSLSQLNKSEKDKHITI 319
Query: 354 --GGTYSLAVNDQGALFMFGQTK--RTG-----EANMYPKPVHDLTGWNIKSVGTSN-TS 403
G +++ + G ++ G+ R G + P + L I+ V S
Sbjct: 320 ANGQHHTIVCDPNGKVYALGRADYGRLGLGDGAKETALPAHITSLDNEVIEKVACGECVS 379
Query: 404 IVIAADDSLIAWGVSPTYGELGMGEINKSTAKPKEVS----RMDSLGITQVAMGYSHTLL 459
++ L +WG+ +LG G P +V ++ + V+ G HT++
Sbjct: 380 FAVSDKGELYSWGMGSCL-QLGNGNDEDDVTTPAKVQGKNLNSETHRVLGVSAGGQHTVI 438
Query: 460 L 460
L
Sbjct: 439 L 439
Score = 69.7 bits (163), Expect = 5e-12
Identities = 91/355 (25%), Positives = 142/355 (40%), Gaps = 56/355 (15%)
Query: 129 EEGEAYTFGRNACGQLGFG-DTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYA 187
E G+A T G+ GQLG G DT+ R P + +L+G I+ G HT+ ++ G VY
Sbjct: 47 ESGQALTLGQGDVGQLGLGPDTLERKKPAVPIDLEGVPIVQVESGGMHTVALSKDGKVYT 106
Query: 188 CGDNKSGQCGLGNTT--PQILKPTRIKY-NGTPIVKVGCGAEFSMILDCNGNLHSFG--M 242
G N G G T+ + +P + + IV V G + L G ++++G
Sbjct: 107 WGCNDDGALGRETTSEGEEEFQPGVVSMPDDVNIVMVSAGDSHTAALSDQGTVYAWGTYR 166
Query: 243 PEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKDVTIVDLSCGNN 302
GQ+G DG K K I + I+ ++ GN+
Sbjct: 167 DASGQIGLQPDG------------------------VKKKPAVILTSESDRIIKIASGND 202
Query: 303 HTVAIDSMKRAFSWGFGGFGRLGHAEQ--KDENVPRLIKYF-------DTVGRGVRSVHC 353
HT A+ + F+ G G+LG ++ R + Y G + V C
Sbjct: 203 HTAALTTSGNLFTLGCAEQGQLGRVKECFSARGGRRGLAYILEPALVRSKKGLKFKDVFC 262
Query: 354 GGTYSLAVNDQGA------LFMFGQTKRTGEANM--YPKPVHDLTGWN-------IKSVG 398
G + V G+ L +GQ TG+ +P V L+ N I
Sbjct: 263 GSFATFVVAKTGSDVYAWGLNNYGQL-GTGDVQTWHFPVKVKSLSQLNKSEKDKHITIAN 321
Query: 399 TSNTSIVIAADDSLIAWGVSPTYGELGMGEINKSTAKPKEVSRMDSLGITQVAMG 453
+ +IV + + A G YG LG+G+ K TA P ++ +D+ I +VA G
Sbjct: 322 GQHHTIVCDPNGKVYALG-RADYGRLGLGDGAKETALPAHITSLDNEVIEKVACG 375
Score = 69.3 bits (162), Expect = 6e-12
Identities = 51/153 (33%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 119 CTAGHSVLVSEEG-EAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNI------IHAAV 171
C + + +V++ G + Y +G N GQLG GD T P V L N I A
Sbjct: 262 CGSFATFVVAKTGSDVYAWGLNNYGQLGTGDVQTWHFPVKVKSLSQLNKSEKDKHITIAN 321
Query: 172 GRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRI-KYNGTPIVKVGCGAEFSMI 230
G+HHT+ G VYA G G+ GLG+ + P I + I KV CG S
Sbjct: 322 GQHHTIVCDPNGKVYALGRADYGRLGLGDGAKETALPAHITSLDNEVIEKVACGECVSFA 381
Query: 231 LDCNGNLHSFGMPEYGQLGHNTDGKYFVTSTKL 263
+ G L+S+GM QLG+ D T K+
Sbjct: 382 VSDKGELYSWGMGSCLQLGNGNDEDDVTTPAKV 414
>SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21)
Length = 595
Score = 80.2 bits (189), Expect = 3e-15
Identities = 49/130 (37%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
Query: 123 HSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDT 182
H +V+ E AYT+G N+ GQLG GD V R P LV LKGK I A G +++FVTD
Sbjct: 95 HVAVVTLERAAYTWGDNSRGQLGQGDLVNRDKPTLVDTLKGKAITRACCGDKYSVFVTDN 154
Query: 183 GCVYACGDNKSGQCGLG--NTTPQILKPTRIK-YNGTPIVKVGCGAEFSMILDCNGNLHS 239
G V CG + +G G G ++TP +P I+ + V CG ++ G + +
Sbjct: 155 GIVMTCGSSDTGCLGHGDWSSTP---RPKLIEGLLSVDVTAVSCGPHHVAVVCSEGLVFT 211
Query: 240 FGMPEYGQLG 249
+G G+LG
Sbjct: 212 WGKGADGRLG 221
Score = 79.4 bits (187), Expect = 6e-15
Identities = 64/255 (25%), Positives = 107/255 (41%), Gaps = 13/255 (5%)
Query: 119 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF 178
C +SV V++ G T G + G LG GD + P+L+ L ++ + G HH
Sbjct: 143 CGDKYSVFVTDNGIVMTCGSSDTGCLGHGDWSSTPRPKLIEGLLSVDVTAVSCGPHHVAV 202
Query: 179 VTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYN--GTPIVKVGCGAEFSMILDCNGN 236
V G V+ G G+ GLGN Q + P ++ I V CG + +M L G
Sbjct: 203 VCSEGLVFTWGKGADGRLGLGNEDDQCV-PCQVTMEDANVSIRDVRCGLDGTMFLTDTGA 261
Query: 237 LHSFGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKDVTIVD 296
L + G +LG N + + F+ K + + + T K+ Y +VD
Sbjct: 262 LLACGSNANNKLGLN-NRQGFLMQMKNLLNKDPVKVTTTPTAVKALSRY-------RVVD 313
Query: 297 LSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHCGGT 356
++ G H+ + + G G+LG K + P +K + + V V CG
Sbjct: 314 MALGPTHSAVLVEPGHVHTLGSNQDGQLGSGNTKPRDAPASVKQLE--DQTVTMVFCGYG 371
Query: 357 YSLAVNDQGALFMFG 371
+++A + L+ +G
Sbjct: 372 FTVAGTNDNTLYFWG 386
Score = 75.8 bits (178), Expect = 7e-14
Identities = 85/318 (26%), Positives = 133/318 (41%), Gaps = 50/318 (15%)
Query: 170 AVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRI-KYNGTPIVKVGCGAEFS 228
+VG+ H VT Y GDN GQ G G+ + KPT + G I + CG ++S
Sbjct: 90 SVGQSHVAVVTLERAAYTWGDNSRGQLGQGDLVNRD-KPTLVDTLKGKAITRACCGDKYS 148
Query: 229 MILDCNGNLHSFGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITP 288
+ + NG + + G + G LGH G + T PK I +G ++
Sbjct: 149 VFVTDNGIVMTCGSSDTGCLGH---GDWSSTPR---------PKLI--------EGLLS- 187
Query: 289 VKDVTIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGV 348
DVT V SCG +H + S F+WG G GRLG + D+ VP + D +
Sbjct: 188 -VDVTAV--SCGPHHVAVVCSEGLVFTWGKGADGRLGLGNEDDQCVPCQVTMED-ANVSI 243
Query: 349 RSVHCGGTYSLAVNDQGALFMFGQ--TKRTGEANM--YPKPVHDLTGWNIKSVGTSNTSI 404
R V CG ++ + D GAL G + G N + + +L + V T+ T++
Sbjct: 244 RDVRCGLDGTMFLTDTGALLACGSNANNKLGLNNRQGFLMQMKNLLNKDPVKVTTTPTAV 303
Query: 405 VIAADDSLIAWGVSPTY------------------GELGMGEINKSTAKPKEVSRMDSLG 446
+ ++ + PT+ G+LG G K P V +++
Sbjct: 304 KALSRYRVVDMALGPTHSAVLVEPGHVHTLGSNQDGQLGSGN-TKPRDAPASVKQLEDQT 362
Query: 447 ITQVAMGYSHTLLLCDNN 464
+T V GY T+ ++N
Sbjct: 363 VTMVFCGYGFTVAGTNDN 380
Score = 60.5 bits (140), Expect = 3e-09
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 15/185 (8%)
Query: 287 TPVKDVTIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTV-G 345
TPV+ + ++S G +H + + A++WG G+LG + + + P L+ DT+ G
Sbjct: 80 TPVR-AQLGEVSVGQSHVAVVTLERAAYTWGDNSRGQLGQGDLVNRDKPTLV---DTLKG 135
Query: 346 RGVRSVHCGGTYSLAVNDQGALFMFGQTKR----TGEANMYPKP--VHDLTGWNIKSVGT 399
+ + CG YS+ V D G + G + G+ + P+P + L ++ +V
Sbjct: 136 KAITRACCGDKYSVFVTDNGIVMTCGSSDTGCLGHGDWSSTPRPKLIEGLLSVDVTAVSC 195
Query: 400 SNTSIVIAADDSLI-AWGVSPTYGELGMGEINKSTAKPKEVSRMD-SLGITQVAMGYSHT 457
+ + + L+ WG G LG+G P +V+ D ++ I V G T
Sbjct: 196 GPHHVAVVCSEGLVFTWGKGAD-GRLGLGN-EDDQCVPCQVTMEDANVSIRDVRCGLDGT 253
Query: 458 LLLCD 462
+ L D
Sbjct: 254 MFLTD 258
Score = 47.2 bits (107), Expect = 3e-05
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 111 RYRLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAA 170
RYR++ HS ++ E G +T G N GQLG G+T R P V +L+ + +
Sbjct: 308 RYRVVDMALGPTHSAVLVEPGHVHTLGSNQDGQLGSGNTKPRDAPASVKQLEDQTVTMVF 367
Query: 171 VGRHHTLFVTDTGCVYACG 189
G T+ T+ +Y G
Sbjct: 368 CGYGFTVAGTNDNTLYFWG 386
Score = 33.1 bits (72), Expect = 0.51
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 7/121 (5%)
Query: 351 VHCGGTYSLAVNDQGALFMFGQTKR--TGEANMY----PKPVHDLTGWNIKSVGTSNTSI 404
V G ++ V + A + +G R G+ ++ P V L G I +
Sbjct: 89 VSVGQSHVAVVTLERAAYTWGDNSRGQLGQGDLVNRDKPTLVDTLKGKAITRACCGDKYS 148
Query: 405 VIAADDSLIAWGVSPTYGELGMGEINKSTAKPKEVSRMDSLGITQVAMGYSHTLLLCDNN 464
V D+ ++ S G LG G+ + ST +PK + + S+ +T V+ G H ++C
Sbjct: 149 VFVTDNGIVMTCGSSDTGCLGHGDWS-STPRPKLIEGLLSVDVTAVSCGPHHVAVVCSEG 207
Query: 465 I 465
+
Sbjct: 208 L 208
>SB_5067| Best HMM Match : RCC1 (HMM E-Value=4.5e-16)
Length = 390
Score = 73.7 bits (173), Expect = 3e-13
Identities = 67/260 (25%), Positives = 110/260 (42%), Gaps = 39/260 (15%)
Query: 119 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVP--ELKGKNIIHAAVGRHHT 176
C + H+++++ +G +++G GQLG G T T P LVP G I A G H+
Sbjct: 129 CGSSHTLVITGDGRLFSWGNGNSGQLGIGSTNTTLQPHLVPLGVTPGTRIEGVACGTRHS 188
Query: 177 LFVTDTGCVYACGDNKSGQCGLGNTTPQI----LKPTRI-KYNGTPIVKVGCGAEFSMIL 231
T+ G ++ G+N S Q G P LKP + +++V CG+ S+ L
Sbjct: 189 FVWTEEGECFSFGNNYSAQLGYDFRKPDFKDNQLKPIYVDTLFNRKVLQVACGSRHSLFL 248
Query: 232 DCNGNLHSFGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKD 291
NG++ + G GQ+G K T IQ D +
Sbjct: 249 FSNGHVAAVGCNNRGQIGIGN-------------------KTDTFCIQNVPD-----LTG 284
Query: 292 VTIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSV 351
VT+V +CGN+H +A D + ++WG+ EN+ F + V+++
Sbjct: 285 VTVV--ACGNSHCLAADVQGQVWAWGYSKACGAREDLLSPENI------FTSTDSCVKAL 336
Query: 352 HCGGTYSLAVNDQGALFMFG 371
G ++S+ + G L G
Sbjct: 337 SGGDSHSMILLHNGRLLTVG 356
Score = 71.7 bits (168), Expect = 1e-12
Identities = 79/301 (26%), Positives = 133/301 (44%), Gaps = 42/301 (13%)
Query: 130 EGEAYTFGRNACGQLGFG--DTVTRSVPELVPELKGKN--IIHAAVGRHHTLFVTDTGCV 185
EG T+G Q G G + V S P L G++ + H A G HTL +T G +
Sbjct: 84 EGFLITWGCGEFAQHGHGHCNDVPISSGLFNPLLVGQDGQVTHIACGSSHTLVITGDGRL 143
Query: 186 YACGDNKSGQCGLGNTTPQILKPTRIKYN---GTPIVKVGCGAEFSMILDCNGNLHSFGM 242
++ G+ SGQ G+G+T L+P + GT I V CG S + G SFG
Sbjct: 144 FSWGNGNSGQLGIGSTN-TTLQPHLVPLGVTPGTRIEGVACGTRHSFVWTEEGECFSFGN 202
Query: 243 PEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKDVTIVDLSCGNN 302
QLG++ F + + + TL+ +K ++ ++CG+
Sbjct: 203 NYSAQLGYDFRKPDFKDNQLKPIYVD------TLFNRK-------------VLQVACGSR 243
Query: 303 HTVAIDSMKRAFSWGFGGFGRLGHAEQKD----ENVPRLIKYFDTVGRGVRSVHCGGTYS 358
H++ + S + G G++G + D +NVP L GV V CG ++
Sbjct: 244 HSLFLFSNGHVAAVGCNNRGQIGIGNKTDTFCIQNVPDL--------TGVTVVACGNSHC 295
Query: 359 LAVNDQGALFMFGQTKRTG--EANMYPKPVHDLTGWNIKSV-GTSNTSIVIAADDSLIAW 415
LA + QG ++ +G +K G E + P+ + T +K++ G + S+++ + L+
Sbjct: 296 LAADVQGQVWAWGYSKACGAREDLLSPENIFTSTDSCVKALSGGDSHSMILLHNGRLLTV 355
Query: 416 G 416
G
Sbjct: 356 G 356
Score = 61.3 bits (142), Expect = 2e-09
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 16/181 (8%)
Query: 290 KDVTIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVR 349
+D + ++CG++HT+ I R FSWG G G+LG P L+ T G +
Sbjct: 120 QDGQVTHIACGSSHTLVITGDGRLFSWGNGNSGQLGIGSTNTTLQPHLVPLGVTPGTRIE 179
Query: 350 SVHCGGTYSLAVNDQGALFMFGQ--TKRTGEANMYP-------KPVHDLTGWNIKSVGT- 399
V CG +S ++G F FG + + G P KP++ T +N K +
Sbjct: 180 GVACGTRHSFVWTEEGECFSFGNNYSAQLGYDFRKPDFKDNQLKPIYVDTLFNRKVLQVA 239
Query: 400 --SNTSIVIAADDSLIAWGVSPTYGELGMGEINKSTAKPKEVSRMDSLGITQVAMGYSHT 457
S S+ + ++ + A G + G++G+G NK+ + + D G+T VA G SH
Sbjct: 240 CGSRHSLFLFSNGHVAAVGCN-NRGQIGIG--NKTDTFCIQ-NVPDLTGVTVVACGNSHC 295
Query: 458 L 458
L
Sbjct: 296 L 296
Score = 48.0 bits (109), Expect = 2e-05
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 8/130 (6%)
Query: 113 RLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVG 172
+++ C + HS+ + G G N GQ+G G+ + VP+L G ++ A G
Sbjct: 234 KVLQVACGSRHSLFLFSNGHVAAVGCNNRGQIGIGNKTDTFCIQNVPDLTGVTVV--ACG 291
Query: 173 RHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKVGCGAE-FSMIL 231
H L G V+A G +K+ CG +L P I + VK G + SMIL
Sbjct: 292 NSHCLAADVQGQVWAWGYSKA--CG---AREDLLSPENIFTSTDSCVKALSGGDSHSMIL 346
Query: 232 DCNGNLHSFG 241
NG L + G
Sbjct: 347 LHNGRLLTVG 356
Score = 35.1 bits (77), Expect = 0.13
Identities = 40/163 (24%), Positives = 64/163 (39%), Gaps = 14/163 (8%)
Query: 315 SWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVH--CGGTYSLAVNDQGALFMFGQ 372
+WG G F + GH D + + VG+ + H CG +++L + G LF +G
Sbjct: 89 TWGCGEFAQHGHGHCNDVPISSGLFNPLLVGQDGQVTHIACGSSHTLVITGDGRLFSWGN 148
Query: 373 TKR----TGEAN--MYPK--PVHDLTGWNIKSVGTSNT-SIVIAADDSLIAWG--VSPTY 421
G N + P P+ G I+ V S V + ++G S
Sbjct: 149 GNSGQLGIGSTNTTLQPHLVPLGVTPGTRIEGVACGTRHSFVWTEEGECFSFGNNYSAQL 208
Query: 422 G-ELGMGEINKSTAKPKEVSRMDSLGITQVAMGYSHTLLLCDN 463
G + + + KP V + + + QVA G H+L L N
Sbjct: 209 GYDFRKPDFKDNQLKPIYVDTLFNRKVLQVACGSRHSLFLFSN 251
>SB_25012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 68.9 bits (161), Expect = 8e-12
Identities = 46/142 (32%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 118 GCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTL 177
GC AG E GE +T+G N QLG G+T P L+ +GKNI A G HHTL
Sbjct: 102 GCDAGCDS--GENGEVFTWGHNGYSQLGNGNTNQGLYPSLLTSFQGKNITQLACGSHHTL 159
Query: 178 F----------------VTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKV 221
++D GC+Y+ G N GQ G GN ++ PT+I + V++
Sbjct: 160 VLNDEGEILCGYAHSLALSDAGCIYSWGANSYGQLGTGNKA-HLVTPTKIAVDKGRFVEI 218
Query: 222 GCG--AEFSMILDCNGNLHSFG 241
G S G ++ +G
Sbjct: 219 GASHYIHMSAAATATGKVYMWG 240
Score = 38.7 bits (86), Expect = 0.010
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 17/145 (11%)
Query: 234 NGNLHSFGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKDVT 293
NG + ++G Y QLG+ + S SF K IT Q + + T V +
Sbjct: 112 NGEVFTWGHNGYSQLGNGNTNQGLYPSLLTSFQ----GKNIT---QLACGSHHTLVLNDE 164
Query: 294 IVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHC 353
++ CG H++A+ +SWG +G+LG + P I V +G R V
Sbjct: 165 -GEILCGYAHSLALSDAGCIYSWGANSYGQLGTGNKAHLVTPTKI----AVDKG-RFVEI 218
Query: 354 GGTY----SLAVNDQGALFMFGQTK 374
G ++ S A G ++M+GQ K
Sbjct: 219 GASHYIHMSAAATATGKVYMWGQCK 243
Score = 36.7 bits (81), Expect = 0.041
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 17/100 (17%)
Query: 181 DTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKVGCGAEFSMILDCNGNL--- 237
+ G V+ G N Q G GNT + + G I ++ CG+ +++L+ G +
Sbjct: 111 ENGEVFTWGHNGYSQLGNGNTNQGLYPSLLTSFQGKNITQLACGSHHTLVLNDEGEILCG 170
Query: 238 -------------HSFGMPEYGQLGHNTDGKYFVTSTKLS 264
+S+G YGQLG + VT TK++
Sbjct: 171 YAHSLALSDAGCIYSWGANSYGQLGTGNKA-HLVTPTKIA 209
Score = 31.1 bits (67), Expect = 2.0
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 412 LIAWGVSPTYGELGMGEINKSTAKPKEVSRMDSLGITQVAMGYSHTLLLCD 462
+ WG + Y +LG G N+ P ++ ITQ+A G HTL+L D
Sbjct: 115 VFTWGHNG-YSQLGNGNTNQGLY-PSLLTSFQGKNITQLACGSHHTLVLND 163
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 67.7 bits (158), Expect = 2e-11
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Query: 105 HKFTDRRYRLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGK 164
+KF R ++ C HS +V+E G Y+FG GQLG GD VP+++ L +
Sbjct: 28 NKFWIRDDAVVNLSCGDEHSAVVTESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQ 87
Query: 165 NIIHAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKVGCG 224
H A G + +T+ G +Y G GQ GLG T +I PTR+ +G + V CG
Sbjct: 88 KYKHLACGSDFSAAITENGELYTWGSCGEGQNGLGEDT-EI--PTRLHLHG-KVRMVSCG 143
Score = 67.3 bits (157), Expect = 3e-11
Identities = 27/83 (32%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 289 VKDVTIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGV 348
++D +V+LSCG+ H+ + +S+G GG G+LGH + +D +VP++I+ D +
Sbjct: 32 IRDDAVVNLSCGDEHSAVVTESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDV--QKY 89
Query: 349 RSVHCGGTYSLAVNDQGALFMFG 371
+ + CG +S A+ + G L+ +G
Sbjct: 90 KHLACGSDFSAAITENGELYTWG 112
Score = 65.3 bits (152), Expect = 1e-10
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 113 RLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRS-VPELVPELKGKNIIHAAV 171
+++V+ C A + +V++ G YTFG+ GQLG G ++ + PE +P + +
Sbjct: 370 QVVVAACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSC 429
Query: 172 GRHHTLFVTDTGCVYACGDNKSGQCGLGNTT-PQILKPTRIK-YNGTPIVKVGCG 224
G T +T G +Y GD + G+ GLG+ KP ++K +N + V CG
Sbjct: 430 GESFTAVITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMVTCG 484
Score = 63.3 bits (147), Expect = 4e-10
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 29/202 (14%)
Query: 166 IIHAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTT-PQILKPTRIKYNGTPIVKVGCG 224
+I G F+ D G +Y CG+ + G+ GL + + +IK +V CG
Sbjct: 319 VITMGFGPRFIAFIED-GSLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIEDQVVVAACG 377
Query: 225 AEFSMILDCNGNLHSFGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDG 284
AEF+ ++ NG++++FG GQLG + S+ + F P++I L+
Sbjct: 378 AEFTAVVTKNGSVYTFGQGNQGQLG--------LGSSMMETEF---PERIPLF------- 419
Query: 285 YITPVKDVTIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENV--PRLIKYFD 342
VK T+ SCG + T I +++G G G+LG ++ N P +K F+
Sbjct: 420 --EKVKARTV---SCGESFTAVITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVKRFN 474
Query: 343 TVGRGVRSVHCGGTYSLAVNDQ 364
V+ V CGG + L ++
Sbjct: 475 NF--TVKMVTCGGCHMLVAAER 494
Score = 45.6 bits (103), Expect = 9e-05
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Query: 322 GRLGHAEQKDENVPRLIKYFDTVGRGVRSVHCGGTYSLAVNDQGALFMFGQTKR----TG 377
G+LG ++ +N +L K ++ V CG ++ V G+++ FGQ + G
Sbjct: 346 GKLGLDHEQLDNTSQLQK-IKSIEDQVVVAACGAEFTAVVTKNGSVYTFGQGNQGQLGLG 404
Query: 378 EANM---YPK--PVHDLTGWNIKSVGTSNTSIVIAADDSLIAWGVSPTYGELGMG-EINK 431
+ M +P+ P+ + S G S T+ VI +L +G +G+LG+G E
Sbjct: 405 SSMMETEFPERIPLFEKVKARTVSCGESFTA-VITKHGNLYTFG-DGRHGKLGLGDECFS 462
Query: 432 STAKPKEVSRMDSLGITQVAMGYSHTLLLCDNNIEEV 468
+T KP++V R ++ + V G H L+ + E V
Sbjct: 463 NTFKPEKVKRFNNFTVKMVTCGGCHMLVAAERKDEGV 499
Score = 44.4 bits (100), Expect = 2e-04
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 127 VSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVY 186
V E G +TFG+ F D + ++ +++ + G H+ VT++G +Y
Sbjct: 8 VPESGAVFTFGKTR-----FADNLANKF-----WIRDDAVVNLSCGDEHSAVVTESGHLY 57
Query: 187 ACGDNKSGQCGLGNT----TPQILKPTRI-KYNGTPIVKVGCGAEFSMILDCNGNLHSFG 241
+ G GQ G G+ P+I++ + KY + CG++FS + NG L+++G
Sbjct: 58 SFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYK-----HLACGSDFSAAITENGELYTWG 112
Query: 242 MPEYGQLGHNTD 253
GQ G D
Sbjct: 113 SCGEGQNGLGED 124
Score = 39.9 bits (89), Expect = 0.004
Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 33/145 (22%)
Query: 218 IVKVGCGAEFSMILDCNGNLHSFGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQIT-L 276
+V + CG E S ++ +G+L+SFG GQLGH D + H +PK I L
Sbjct: 37 VVNLSCGDEHSAVVTESGHLYSFGCGGDGQLGHG-DAE--------DSH---VPKIIEGL 84
Query: 277 YIQKSKDGYITPVKDVTIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPR 336
+QK K L+CG++ + AI ++WG G G+ G E D +P
Sbjct: 85 DVQKYKH-------------LACGSDFSAAITENGELYTWGSCGEGQNGLGE--DTEIPT 129
Query: 337 LIKYFDTVGRGVRSVHCGGTYSLAV 361
+ G+ VR V C G Y +AV
Sbjct: 130 RLHLH---GK-VRMVSC-GYYHMAV 149
>SB_20583| Best HMM Match : RCC1 (HMM E-Value=6.2e-08)
Length = 970
Score = 63.7 bits (148), Expect = 3e-10
Identities = 47/157 (29%), Positives = 69/157 (43%), Gaps = 23/157 (14%)
Query: 113 RLIVSGCTAGHSVLVSE---------EGEAYTFGRNACGQLGFGDTVTRSVPELVPEL-- 161
R++ C A H+VL++E G AY++GR G LG G ++ + P V L
Sbjct: 161 RVMSMACGAYHTVLLAEGYGWLGNLSSGVAYSWGRGGNGALGHGTLLSLARPSYVKRLYH 220
Query: 162 ------KGKNIIHAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIKY-- 213
K + A GR H+ F+T GCVY CG N+ GQ G L PT++
Sbjct: 221 GDKDGKDAKTVSQVAAGRAHSAFLTKDGCVYTCGSNQYGQLGYYTKETYKLLPTKVDLGL 280
Query: 214 --NGTP--IVKVGCGAEFSMILDCNGNLHSFGMPEYG 246
GTP ++ C +M+ + +G YG
Sbjct: 281 TDTGTPRSATELSCSEHCTMVRTSDDKCIMWGKFCYG 317
Score = 41.1 bits (92), Expect = 0.002
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 22/170 (12%)
Query: 112 YRLIVSGCTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAV 171
Y + G ++ + G Y +G + + +T P +V + ++ A
Sbjct: 111 YSIKAIGAGQHYACAIMTSGWMYAWGLSGAAK---DETKFVKTPTVVKGVDNARVMSMAC 167
Query: 172 GRHHTLFVTD---------TGCVYACGDNKSGQCGLGNTTPQILKPTRIK--YNGTP--- 217
G +HT+ + + +G Y+ G +G G G T + +P+ +K Y+G
Sbjct: 168 GAYHTVLLAEGYGWLGNLSSGVAYSWGRGGNGALGHG-TLLSLARPSYVKRLYHGDKDGK 226
Query: 218 ----IVKVGCGAEFSMILDCNGNLHSFGMPEYGQLGHNTDGKYFVTSTKL 263
+ +V G S L +G +++ G +YGQLG+ T Y + TK+
Sbjct: 227 DAKTVSQVAAGRAHSAFLTKDGCVYTCGSNQYGQLGYYTKETYKLLPTKV 276
Score = 37.5 bits (83), Expect = 0.024
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 31/219 (14%)
Query: 123 HSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIH---------AAVGR 173
H+ + ++ G+A T+G + G LG + VP V K ++ G+
Sbjct: 61 HAAVATDAGKALTWGYSPQGALGIEHLASLIVPLPVEVTLEKTVLQIETLYSIKAIGAGQ 120
Query: 174 HHTLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIK-YNGTPIVKVGCGAEFSMIL- 231
H+ + +G +YA G + + + + T + PT +K + ++ + CGA +++L
Sbjct: 121 HYACAIMTSGWMYAWGLSGAAK----DETKFVKTPTVVKGVDNARVMSMACGAYHTVLLA 176
Query: 232 ---DCNGNLHSFGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITP 288
GNL S +G+ G+ G T LS P + KDG
Sbjct: 177 EGYGWLGNLSSGVAYSWGRGGNGALGH----GTLLSL---ARPSYVKRLYHGDKDG---- 225
Query: 289 VKDV-TIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGH 326
KD T+ ++ G H+ + ++ G +G+LG+
Sbjct: 226 -KDAKTVSQVAAGRAHSAFLTKDGCVYTCGSNQYGQLGY 263
Score = 35.9 bits (79), Expect = 0.072
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 16/116 (13%)
Query: 289 VKDVTIVDLSCGNNHTVAID---------SMKRAFSWGFGGFGRLGHAEQKDENVPRLIK 339
V + ++ ++CG HTV + S A+SWG GG G LGH P +K
Sbjct: 157 VDNARVMSMACGAYHTVLLAEGYGWLGNLSSGVAYSWGRGGNGALGHGTLLSLARPSYVK 216
Query: 340 ---YFDTVGRGVRSVH---CGGTYSLAVNDQGALFMFGQTKRTGEANMYPKPVHDL 389
+ D G+ ++V G +S + G ++ G + + G+ Y K + L
Sbjct: 217 RLYHGDKDGKDAKTVSQVAAGRAHSAFLTKDGCVYTCG-SNQYGQLGYYTKETYKL 271
Score = 35.1 bits (77), Expect = 0.13
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 160 ELKGKNIIHAAVGRHHTLFVTDTGCVYACGDNKSGQCG 197
EL K I+ A G H +TD+G + CG K GQ G
Sbjct: 487 ELDSKIIVQIACGAFHVAALTDSGELLTCGTGKHGQLG 524
Score = 32.3 bits (70), Expect = 0.89
Identities = 34/131 (25%), Positives = 49/131 (37%), Gaps = 5/131 (3%)
Query: 258 VTSTKLSFHFETIPKQITLYIQKSKDGYIT--PVKDVTIVDLSCGNNHTVAIDSMKRAFS 315
V ST +F F T + + S D + + IV ++CG H A+ +
Sbjct: 455 VESTLTTFVFRTEVGDVFSWAPFSGDVVLLHRELDSKIIVQIACGAFHVAALTDSGELLT 514
Query: 316 WGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHCGGTYSLAVNDQGALFMFGQTKR 375
G G G+LGH + + + + V R SV CG Y D F K
Sbjct: 515 CGTGKHGQLGHTHMRSSDEFQTV-LLSKVER-FASVSCGIAYFWGQLDLPRCESFYHKKA 572
Query: 376 TGEA-NMYPKP 385
+A N P P
Sbjct: 573 LPDASNTIPDP 583
Score = 30.3 bits (65), Expect = 3.6
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 218 IVKVGCGAEFSMILDCNGNLHSFGMPEYGQLGH 250
IV++ CGA L +G L + G ++GQLGH
Sbjct: 493 IVQIACGAFHVAALTDSGELLTCGTGKHGQLGH 525
>SB_31780| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 964
Score = 61.3 bits (142), Expect = 2e-09
Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 26/239 (10%)
Query: 126 LVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCV 185
L+++ G TFG G LG G T S ++V +L G + + G H + VT V
Sbjct: 435 LLTDRGILMTFGSGTYGCLGHGTTNYVSQAKIVEDLLGFEVEDISCGSSHIMAVTADHEV 494
Query: 186 YACGDNKSGQCGLGNTTPQILKPTRIKY-NGTPIVKVGCGAEFSMILDCNGNLHSFGMPE 244
+A G +G+ G G + + P I G V CG + S + L + G
Sbjct: 495 FAWGRGDNGRLGTG-SQQEYWSPKAISLPEGMRARSVHCGVDCSFAITLENKLLACGSNR 553
Query: 245 YGQLG-HNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKDVTIVDLSCGNNH 303
+L N DG +++ + Q S + V ++ G +H
Sbjct: 554 CNKLALDNEDGPV---------------EEVAVLRQVS----VPDFNSVGTSSVAMGTSH 594
Query: 304 TVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHCGGTYSLAVN 362
T+ + + +S+G FG+LG+ + P+L++ + V V CG T+S+AV+
Sbjct: 595 TLVLLQNGKLYSFGSNSFGQLGYVREGVSRFPQLVESLNDVS----YVACGDTFSVAVS 649
Score = 57.6 bits (133), Expect = 2e-08
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 18/164 (10%)
Query: 275 TLYIQKSKDGYITPVKDVTIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENV 334
T Y+ ++K + + + D+SCG++H +A+ + F+WG G GRLG Q++
Sbjct: 458 TNYVSQAK--IVEDLLGFEVEDISCGSSHIMAVTADHEVFAWGRGDNGRLGTGSQQEYWS 515
Query: 335 PRLIKYFDTVGRGVRSVHCGGTYSLAVNDQGALFMFGQTKRTGEA-NMYPKPVHDLTGW- 392
P+ I + G RSVHCG S A+ + L G + A + PV ++
Sbjct: 516 PKAISLPE--GMRARSVHCGVDCSFAITLENKLLACGSNRCNKLALDNEDGPVEEVAVLR 573
Query: 393 -----NIKSVGTSNT------SIVIAADDSLIAWGVSPTYGELG 425
+ SVGTS+ ++V+ + L ++G S ++G+LG
Sbjct: 574 QVSVPDFNSVGTSSVAMGTSHTLVLLQNGKLYSFG-SNSFGQLG 616
Score = 55.2 bits (127), Expect = 1e-07
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 6/142 (4%)
Query: 119 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF 178
C + H + V+ + E + +GR G+LG G P+ + +G G +
Sbjct: 480 CGSSHIMAVTADHEVFAWGRGDNGRLGTGSQQEYWSPKAISLPEGMRARSVHCGVDCSFA 539
Query: 179 VTDTGCVYACGDNKSGQCGLGN-----TTPQILKPTRI-KYNGTPIVKVGCGAEFSMILD 232
+T + ACG N+ + L N +L+ + +N V G +++L
Sbjct: 540 ITLENKLLACGSNRCNKLALDNEDGPVEEVAVLRQVSVPDFNSVGTSSVAMGTSHTLVLL 599
Query: 233 CNGNLHSFGMPEYGQLGHNTDG 254
NG L+SFG +GQLG+ +G
Sbjct: 600 QNGKLYSFGSNSFGQLGYVREG 621
Score = 50.4 bits (115), Expect = 3e-06
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 315 SWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHCGGTYSLAVNDQGALFMFGQTK 374
++G G +G LGH + ++++ D +G V + CG ++ +AV +F +G+
Sbjct: 444 TFGSGTYGCLGHGTTNYVSQAKIVE--DLLGFEVEDISCGSSHIMAVTADHEVFAWGRGD 501
Query: 375 R----TGEANMY--PKPVHDLTGWNIKSVGTS-NTSIVIAADDSLIAWGVSPTYGELGMG 427
TG Y PK + G +SV + S I ++ L+A G S +L +
Sbjct: 502 NGRLGTGSQQEYWSPKAISLPEGMRARSVHCGVDCSFAITLENKLLACG-SNRCNKLALD 560
Query: 428 EIN---KSTAKPKEVSRMD--SLGITQVAMGYSHTLLLCDN 463
+ + A ++VS D S+G + VAMG SHTL+L N
Sbjct: 561 NEDGPVEEVAVLRQVSVPDFNSVGTSSVAMGTSHTLVLLQN 601
Score = 34.7 bits (76), Expect = 0.17
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 123 HSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDT 182
H++++ + G+ Y+FG N+ GQLG+ P+LV L ++ + A G ++ V+
Sbjct: 594 HTLVLLQNGKLYSFGSNSFGQLGYVREGVSRFPQLVESL--NDVSYVACGDTFSVAVSSD 651
Query: 183 GCVYAC 188
C
Sbjct: 652 TTAALC 657
>SB_2363| Best HMM Match : RCC1 (HMM E-Value=0.00041)
Length = 234
Score = 60.9 bits (141), Expect = 2e-09
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 119 CTAGHSVLVSEEGEAYTFGRNACG-QLGFGDT-VTRSVPELVPELKGKNIIHAAVGRHHT 176
C + S+ ++ G+ Y +G CG LG G T + P+L+ L+ +++ +VG H
Sbjct: 15 CGSQCSLALTSTGQVYVWG---CGPSLGTGSVDATSATPKLLLALQSHSVVDISVGDSHC 71
Query: 177 LFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRI-KYNGTPIVKVGCGAEFSM 229
+ +T VYA G+N GQCG G+ T I KP ++ +G + ++ G ++
Sbjct: 72 VALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTV 125
Score = 54.4 bits (125), Expect = 2e-07
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 345 GRGVRSVHCGGTYSLAVNDQGALFMFGQTKRTGEANM-----YPKPVHDLTGWNIKSVGT 399
G +R V CG SLA+ G ++++G G ++ PK + L ++ +
Sbjct: 7 GMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTGSVDATSATPKLLLALQSHSVVDISV 66
Query: 400 SNTSIV-IAADDSLIAWGVSPTYGELGMGEINKSTAKPKEVSRMDSLGITQVAMGYSHTL 458
++ V + D+++ AWG + + G+ G G KPK+V +D + + Q++ G SHT+
Sbjct: 67 GDSHCVALTQDNNVYAWG-NNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTV 125
Score = 39.5 bits (88), Expect = 0.006
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 386 VHDLTGWNIKSVGT-SNTSIVIAADDSLIAWGVSPTYGELGMGEINKSTAKPKEVSRMDS 444
+ L G I+ V S S+ + + + WG P+ LG G ++ ++A PK + + S
Sbjct: 2 IEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPS---LGTGSVDATSATPKLLLALQS 58
Query: 445 LGITQVAMGYSHTLLLC-DNNI 465
+ +++G SH + L DNN+
Sbjct: 59 HSVVDISVGDSHCVALTQDNNV 80
Score = 33.1 bits (72), Expect = 0.51
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 293 TIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVH 352
++VD+S G++H VA+ ++WG G+ G + + K G V +
Sbjct: 60 SVVDISVGDSHCVALTQDNNVYAWGNNSMGQCGQGHCTTP-ITKPKKVLGLDGVAVHQIS 118
Query: 353 CGGTYSLA 360
G ++++A
Sbjct: 119 AGTSHTVA 126
Score = 31.5 bits (68), Expect = 1.5
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Query: 157 LVPELKGKNIIHAAVGRHHTLFVTDTGCVY--ACGDN-KSGQCGLGNTTPQILKPTRIKY 213
++ L+G I G +L +T TG VY CG + +G + TP++L +
Sbjct: 1 VIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTGSVDATSATPKLL----LAL 56
Query: 214 NGTPIVKVGCGAEFSMILDCNGNLHSFGMPEYGQLG 249
+V + G + L + N++++G GQ G
Sbjct: 57 QSHSVVDISVGDSHCVALTQDNNVYAWGNNSMGQCG 92
>SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2408
Score = 59.3 bits (137), Expect = 7e-09
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Query: 297 LSCGNNHTVAIDSM-KRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHCGG 355
++CG NHT+ + + +++G G +G+LG + P+ I G G + + CG
Sbjct: 1710 VACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVL--AGIGCKKICCGT 1767
Query: 356 TYSLAVNDQGALFMFGQTKRTGEAN------MYPKPVHDLTGWNIKSVGTSNTSIV-IAA 408
+S+ + + G +F FGQ + TG+ P+ + L I V ++ + +
Sbjct: 1768 QFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLALTS 1827
Query: 409 DDSLIAWGVSPTYGELGMGEINKSTAKPKEVSRMDSLGITQVAMGYSHT 457
+ WG S G+LG+G N + +P + + I Q++ G +H+
Sbjct: 1828 TGEVWGWG-SNVDGQLGLGHSN-AQREPCVIPDLKGKNIRQISAGRNHS 1874
Score = 52.4 bits (120), Expect = 8e-07
Identities = 52/199 (26%), Positives = 82/199 (41%), Gaps = 30/199 (15%)
Query: 166 IIHA---AVGRHHTLFVT-DTGCVYACGDNKSGQCGLGNTTPQILKPTRIKYNGTPIVKV 221
I+H+ A G +HTL ++ D V+A GD G+ GLG+ T + G K+
Sbjct: 1704 IVHSFQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKI 1763
Query: 222 GCGAEFSMILDCNGNLHSFGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKS 281
CG +FS++L +G + SFG +L +G+ P+QI
Sbjct: 1764 CCGTQFSVVLTNDGRVFSFGQE---RLTGQPEGR---------LRGPQKPQQIQALASHF 1811
Query: 282 KDGYITPVKDVTIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYF 341
D D+ G H +A+ S + WG G+LG + P +I
Sbjct: 1812 ID------------DVCVGAEHVLALTSTGEVWGWGSNVDGQLGLGHSNAQREPCVIP-- 1857
Query: 342 DTVGRGVRSVHCGGTYSLA 360
D G+ +R + G +S A
Sbjct: 1858 DLKGKNIRQISAGRNHSAA 1876
Score = 50.4 bits (115), Expect = 3e-06
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 121 AGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHT 176
A H + ++ GE + +G N GQLG G + + P ++P+LKGKNI + GR+H+
Sbjct: 1819 AEHVLALTSTGEVWGWGSNVDGQLGLGHSNAQREPCVIPDLKGKNIRQISAGRNHS 1874
Score = 49.2 bits (112), Expect = 7e-06
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 5/134 (3%)
Query: 119 CTAGHSVLVSEEGEA-YTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTL 177
C H++++S +G + FG G+LG G ++ P+ + L G G ++
Sbjct: 1712 CGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQFSV 1771
Query: 178 FVTDTGCVYACGDNK-SGQCGLGNTTPQILKPTRIKYNGTPIVKVGC-GAEFSMILDCNG 235
+T+ G V++ G + +GQ PQ KP +I+ + + C GAE + L G
Sbjct: 1772 VLTNDGRVFSFGQERLTGQPEGRLRGPQ--KPQQIQALASHFIDDVCVGAEHVLALTSTG 1829
Query: 236 NLHSFGMPEYGQLG 249
+ +G GQLG
Sbjct: 1830 EVWGWGSNVDGQLG 1843
Score = 46.8 bits (106), Expect = 4e-05
Identities = 26/86 (30%), Positives = 39/86 (45%)
Query: 119 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF 178
C SV+++ +G ++FG+ G P+ + L I VG H L
Sbjct: 1765 CGTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLA 1824
Query: 179 VTDTGCVYACGDNKSGQCGLGNTTPQ 204
+T TG V+ G N GQ GLG++ Q
Sbjct: 1825 LTSTGEVWGWGSNVDGQLGLGHSNAQ 1850
Score = 45.6 bits (103), Expect = 9e-05
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 132 EAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYACGDN 191
+AY +G GQL +VP + L + G++ T V G + ACG+
Sbjct: 1424 DAYLWGGGRHGQLAESGRGV-NVPTVTKSLASAQQV--VCGQNCTFVVQVNGTILACGEG 1480
Query: 192 KSGQCGLGNTTPQILKPTRIKYNGTPIVKVGC--GAE-FSMILDCNGNLHSFGMPEYGQL 248
G+ G+GN+ G ++++ G++ S+ L +G + S+G +YG+L
Sbjct: 1481 SYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKL 1540
Query: 249 GH-NTD 253
GH N+D
Sbjct: 1541 GHGNSD 1546
Score = 41.9 bits (94), Expect = 0.001
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 119 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRH---H 175
C + +V G G + G+LG G++ + L+G +I A R H
Sbjct: 1460 CGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGH 1519
Query: 176 TLFVTDTGCVYACGDNKSGQCGLGNTTPQILKPTRIK 212
+L +TD+G V++ GD G+ G GN+ Q +P +I+
Sbjct: 1520 SLALTDSGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIE 1555
Score = 41.1 bits (92), Expect = 0.002
Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 21/120 (17%)
Query: 220 KVGCGAEFSMILDCNGNLHSFGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQ 279
+V CG + ++ NG + + G YG+LG F TL
Sbjct: 1457 QVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLF-----------------TLSPI 1499
Query: 280 KSKDGYITPVKDVTIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIK 339
+ GY+ + I + H++A+ FSWG G +G+LGH + PR I+
Sbjct: 1500 SALQGYVV----IQIATSRGSDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQIE 1555
Score = 38.7 bits (86), Expect = 0.010
Identities = 15/62 (24%), Positives = 33/62 (53%)
Query: 122 GHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTD 181
GHS+ +++ GE +++G G+LG G++ + P + L+G+ +++ + T
Sbjct: 1518 GHSLALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGEEVVNWTASSSRLVMATT 1577
Query: 182 TG 183
G
Sbjct: 1578 AG 1579
Score = 29.5 bits (63), Expect = 6.3
Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 7/116 (6%)
Query: 299 CGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKD-ENVPRLIKYFDTVGRGVRSVHCGGTY 357
CG N T + + G G +GRLG D + + V + + +
Sbjct: 1460 CGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGH 1519
Query: 358 SLAVNDQGALFMFGQTK--RTGEAN----MYPKPVHDLTGWNIKSVGTSNTSIVIA 407
SLA+ D G +F +G + G N P+ + L G + + S++ +V+A
Sbjct: 1520 SLALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGEEVVNWTASSSRLVMA 1575
>SB_32347| Best HMM Match : RCC1 (HMM E-Value=0.00072)
Length = 677
Score = 47.6 bits (108), Expect = 2e-05
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 16/143 (11%)
Query: 324 LGHA---EQKDENVPRLIKYFDTVGRGVRSVHCGGTYSLAVNDQGALFMFGQTKRTGEAN 380
LGH E++ +++P ++ V SV CG ++LA+ G GQ G+
Sbjct: 2 LGHGDLIEEEGKSMPFRVEILHMHRIKVLSVACGIEHTLALCRDG----LGQ----GDTQ 53
Query: 381 MYPKPVH--DLTGWNIKSVGTSNT-SIVIAADDSLIAWGVSPTYGELGMGEINKSTAKPK 437
+ +PV+ +L+ +V + S+ ++AD + +WG +G+LG+ I + P
Sbjct: 54 QHTRPVYVTELSDKKCIAVVCGHYHSLALSADQQVYSWGWG-VHGQLGLDSIEDALL-PS 111
Query: 438 EVSRMDSLGITQVAMGYSHTLLL 460
V+ + +TQ+A GYSHT +L
Sbjct: 112 HVTSLSGAFVTQLAAGYSHTAVL 134
Score = 43.2 bits (97), Expect = 5e-04
Identities = 17/57 (29%), Positives = 35/57 (61%)
Query: 279 QKSKDGYITPVKDVTIVDLSCGNNHTVAIDSMKRAFSWGFGGFGRLGHAEQKDENVP 335
Q ++ Y+T + D + + CG+ H++A+ + ++ +SWG+G G+LG +D +P
Sbjct: 54 QHTRPVYVTELSDKKCIAVVCGHYHSLALSADQQVYSWGWGVHGQLGLDSIEDALLP 110
Score = 41.1 bits (92), Expect = 0.002
Identities = 25/88 (28%), Positives = 39/88 (44%)
Query: 144 LGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYACGDNKSGQCGLGNTTP 203
LG GDT + P V EL K I G +H+L ++ VY+ G GQ GL +
Sbjct: 47 LGQGDTQQHTRPVYVTELSDKKCIAVVCGHYHSLALSADQQVYSWGWGVHGQLGLDSIED 106
Query: 204 QILKPTRIKYNGTPIVKVGCGAEFSMIL 231
+L +G + ++ G + +L
Sbjct: 107 ALLPSHVTSLSGAFVTQLAAGYSHTAVL 134
Score = 37.1 bits (82), Expect = 0.031
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 119 CTAGHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLF 178
C HS+ +S + + Y++G GQLG +P V L G + A G HT
Sbjct: 74 CGHYHSLALSADQQVYSWGWGVHGQLGLDSIEDALLPSHVTSLSGAFVTQLAAGYSHTAV 133
Query: 179 VTDTGC 184
+T T C
Sbjct: 134 LT-TEC 138
Score = 29.1 bits (62), Expect = 8.3
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 421 YGELGMGEINKSTAKPKEVSRMDSLGITQVAMGYSHTLLLCDNNIEEVKQKLDTIPAF 478
+G+L + E KS E+ M + + VA G HTL LC + + + + T P +
Sbjct: 4 HGDL-IEEEGKSMPFRVEILHMHRIKVLSVACGIEHTLALCRDGLGQGDTQQHTRPVY 60
>SB_30518| Best HMM Match : FYVE (HMM E-Value=1.2e-18)
Length = 447
Score = 47.6 bits (108), Expect = 2e-05
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 130 EGEAYTFGRNACGQLGFG-DTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYAC 188
EG ++FG N GQLG D + S + V L I A G H+ + + G ++ C
Sbjct: 240 EGALFSFGENDYGQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEKGRMFCC 299
Query: 189 GDNKSGQCG 197
GDN GQ G
Sbjct: 300 GDNTYGQLG 308
Score = 34.7 bits (76), Expect = 0.17
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 27/133 (20%)
Query: 235 GNLHSFGMPEYGQLGHNTDGKYFVTSTKLSFHFETIPKQITLYIQKSKDGYITPVKDVTI 294
G L SFG +YGQLG D K +T YIQ ++ + + I
Sbjct: 241 GALFSFGENDYGQLGIPED------------------KLLTSYIQ-----CVSSLSEHKI 277
Query: 295 VDLSCGNNHTVAIDSMKRAFSWGFGGFGRLG-HA-EQKDENVPRLIKYFDTVGRGVRSVH 352
++CG+ H+ A+ R F G +G+LG H + +D++V + V R VH
Sbjct: 278 SRVACGSFHSAALAEKGRMFCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVH 337
Query: 353 --CGGTYSLAVND 363
CG +++ V +
Sbjct: 338 VACGDSHTAVVTE 350
Score = 34.3 bits (75), Expect = 0.22
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 119 CTAGHSVLVSEEGEAYTFGRNACGQLGF------GDTVTRSVPELVPELKGKNIIHAAVG 172
C + HS ++E+G + G N GQLG D VT +V V +H A G
Sbjct: 282 CGSFHSAALAEKGRMFCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACG 341
Query: 173 RHHTLFVTD 181
HT VT+
Sbjct: 342 DSHTAVVTE 350
>SB_29134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 44.8 bits (101), Expect = 2e-04
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 122 GHSVLVSEEGEAYTFGRNACGQLGFGDTVTRSVPE--LVPELKGKNIIHAAVGRHHTLFV 179
GH+ ++++ E YT G N GQLG GDT+ R L+P +K H + G +HTL +
Sbjct: 96 GHTAMITDSRELYTCGWNNRGQLGLGDTINRIELHRVLIPPVK-----HVSCGWNHTLAI 150
Query: 180 TDTGCV 185
T V
Sbjct: 151 TGVSWV 156
Score = 43.6 bits (98), Expect = 4e-04
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 137 GRNACGQLGFGDTVTRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYACGDNKSGQC 196
G N+ GQL G T P + K +++ G HT +TD+ +Y CG N GQ
Sbjct: 60 GANSYGQLACGHTDDVIKPAVHSNWKD-DVLCITGGGGHTAMITDSRELYTCGWNNRGQL 118
Query: 197 GLGNTTPQILKPTRIKYNGTPIVKVGCG 224
GLG+T +I + R+ P+ V CG
Sbjct: 119 GLGDTINRI-ELHRVLI--PPVKHVSCG 143
>SB_31129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 35.5 bits (78), Expect = 0.095
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 172 GRHHTLFVTDTGCVYACGDNKSGQCGLGN 200
G T+F+TDTG + ACG N + + GL N
Sbjct: 14 GLDGTMFLTDTGALLACGSNANNKLGLNN 42
>SB_23006| Best HMM Match : RCC1 (HMM E-Value=0.014)
Length = 52
Score = 34.3 bits (75), Expect = 0.22
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 319 GGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSVHCGGTYSLAVNDQGALF 368
G +G+LG +P +K +G GV V CG +S+A+ GA++
Sbjct: 3 GDYGKLGRGGSDGCKIP--MKVESLIGLGVSKVECGSQFSVALTRSGAVY 50
>SB_34545| Best HMM Match : RCC1 (HMM E-Value=0.027)
Length = 230
Score = 33.1 bits (72), Expect = 0.51
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 126 LVSEEGEAYTFGRNACGQLGFGDTVTRSVPELV--PELKGKNI 166
LV G YTFGR GQLG G T + P P L+ NI
Sbjct: 34 LVPSSGRVYTFGRGGDGQLGLGVTNNCNSPMTAKGPWLRSNNI 76
>SB_56393| Best HMM Match : CTF_NFI (HMM E-Value=0.75)
Length = 886
Score = 30.7 bits (66), Expect = 2.7
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 386 VHDLTGWNIKSVGTSNTSIVIAADDSLIAWGV---SPTYGELGMGEINKSTAKPKEVSR 441
+H++ +N S+ TSN + +D S++ WG + G L +KS P SR
Sbjct: 558 IHNIQRYNGLSIVTSNVDFITESDASMLGWGACCNGQSTGGLWSESHSKSADPPTGTSR 616
>SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 485
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 41 PPAEQSKPSTPEPEECTTKLPEELLKTFYKT--PGVLMIAGLVSWDL-TARRDNNPTKRT 97
PP++Q K PEPE+ T+ EL + K L A D TA + N K
Sbjct: 200 PPSKQEKKEEPEPEKMETETEPELAENEKKAMEEKELGNAAYKKKDFDTAHKHFNNAKEL 259
Query: 98 HPNLYTFH 105
+P+ TF+
Sbjct: 260 NPDNMTFY 267
>SB_26483| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1702
Score = 29.5 bits (63), Expect = 6.3
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 298 SCGNNHT-VAIDSMKRAFSWGFGGFGRLGHAEQKDENVPRLIKYFDTVGRGVRSV 351
+CGN+ T + +DS K GG L A+Q + +I D VG+ V S+
Sbjct: 253 ACGNSLTELILDSFKNWLQGIDGGRRELRTAKQYVSQISTIISLIDPVGQNVSSI 307
>SB_32302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 29.1 bits (62), Expect = 8.3
Identities = 16/45 (35%), Positives = 20/45 (44%)
Query: 151 TRSVPELVPELKGKNIIHAAVGRHHTLFVTDTGCVYACGDNKSGQ 195
T E V E+ K+ + +G L V TG VY C KS Q
Sbjct: 192 TEDTTEYVVEMARKHWLGVVIGTAACLTVVITGAVYCCTKKKSYQ 236
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.135 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,157,596
Number of Sequences: 59808
Number of extensions: 764479
Number of successful extensions: 1648
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1331
Number of HSP's gapped (non-prelim): 173
length of query: 480
length of database: 16,821,457
effective HSP length: 85
effective length of query: 395
effective length of database: 11,737,777
effective search space: 4636421915
effective search space used: 4636421915
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
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