GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002104-TA|BGIBMGA002104-PA|undefined
         (1852 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    29   1.1  
AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1 prot...    29   1.5  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    27   3.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   8.0  

>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 2/95 (2%)

Query: 581 KAAGLLTPLEGKTPQQKEKILKGLAKAGIPLPEPKTVSEKNLIRKVRQEVGLPPEPSTPS 640
           K+AG  T L   TP    ++ + LA A        TV     + +  Q + L  E S   
Sbjct: 52  KSAGTATKLATSTPVSTGEVRRMLADA--KADNETTVGIVKRLEEQIQLLRLQMEASNEQ 109

Query: 641 LKEKYRKAQAAGIITPLEGKSHTEKEKILKKMYDS 675
           LKE  R+A+ A     +    H E+ +  K+++++
Sbjct: 110 LKEAQREAREAREDARVREAEHREELRKEKELFNA 144


>AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1 protein.
          Length = 153

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 1571 SKCQPGD-YNQASRSCNCCPENQVET-FSNTSKPMKSTGVGCSPPVSRGNLAVLPPRANC 1628
            SKC PG  +N + + C+   + Q     +  ++P+      C P     ++  +P   +C
Sbjct: 54   SKCPPGLLWNDSQKQCDYPAQAQCAPGVTPNTEPVPKPSPNCPPEYDPDHMVYIPHETDC 113

Query: 1629 GIPSCCN 1635
            G    C+
Sbjct: 114  GKYYICD 120


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 27.5 bits (58), Expect = 3.5
 Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 2/117 (1%)

Query: 495 LGLPPEPKTQSIKEKYAKAQATGLITPLEGKTNDQKEKILRGQAQLGIPLPEGRTPSEKA 554
           LGLPP P+     +  A       I  +E  T+D   +I     Q+ + +   +T  E  
Sbjct: 622 LGLPPGPEVIGFADDIALTVLGESIEEIELLTSDSVSRIESWMQQMRLEIAHKKT--EFL 679

Query: 555 LINKVKGAAALGTSLGRIPSEKIRKAKAAGLLTPLEGKTPQQKEKILKGLAKAGIPL 611
           +I+  K   +    +G    E IR  K  G++        +  E     + KA I L
Sbjct: 680 IISSHKTVQSGSIRVGDERIESIRHLKYLGVIIDDRLSFRKHVEYACNNVFKAAISL 736


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 12/46 (26%), Positives = 27/46 (58%)

Query: 100 KALIQRIKTGAGLPSVKMKPSERIRKAKEAGLLTPLEGKTAEQKEK 145
           +++ +R+K      + +++  ER R+A+EA +    E +  EQ+E+
Sbjct: 435 QSIHERMKLEEEHRAARLREEERAREAREAAIEREKERELREQRER 480


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.310    0.129    0.359 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,639,881
Number of Sequences: 2123
Number of extensions: 66725
Number of successful extensions: 154
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 151
Number of HSP's gapped (non-prelim): 7
length of query: 1852
length of database: 516,269
effective HSP length: 74
effective length of query: 1778
effective length of database: 359,167
effective search space: 638598926
effective search space used: 638598926
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 55 (26.2 bits)