GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002104-TA|BGIBMGA002104-PA|undefined
         (1852 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    26   3.3  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 25.8 bits (54), Expect = 3.3
 Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 4/91 (4%)

Query: 596 QKEKILKGLAKAGIPLPEPKTVSEKNLIRKVRQEVGLPPEPSTPSLKEKYRKAQAAGIIT 655
           +K+    G A   + + EP  V E N        +   P  ST S     + A AAG  +
Sbjct: 486 RKDSGYDGAASTAV-IHEP--VVETNSSPSPNPRIASAPSSSTSS-SPPAKGAAAAGQPS 541

Query: 656 PLEGKSHTEKEKILKKMYDSGIPLPEGRTPS 686
              G    ++E    K   S +PLP  RTPS
Sbjct: 542 KRNGGETNKQELKRLKSTVSLLPLPLARTPS 572


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.310    0.129    0.359 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,620
Number of Sequences: 429
Number of extensions: 21516
Number of successful extensions: 44
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 43
Number of HSP's gapped (non-prelim): 2
length of query: 1852
length of database: 140,377
effective HSP length: 68
effective length of query: 1784
effective length of database: 111,205
effective search space: 198389720
effective search space used: 198389720
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 51 (24.6 bits)