GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002103-TA|BGIBMGA002103-PA|IPR000217|Tubulin,
IPR002452|Alpha tubulin, IPR003008|Tubulin/FtsZ, GTPase,
IPR008280|Tubulin/FtsZ, C-terminal
         (450 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    24   2.5  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   5.8  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)

Query: 116 DLVLDRVRKLADQCTGLQGF 135
           D+V    RK A+ C  LQGF
Sbjct: 233 DVVASNSRKTAEMCYKLQGF 252


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)

Query: 376 CMLSNTTAIAEAWSRLNHKFDL 397
           C+ S  + + +   +L HKFDL
Sbjct: 259 CVRSEASKVVKNAQKLRHKFDL 280


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.137    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,796
Number of Sequences: 317
Number of extensions: 4148
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 2
length of query: 450
length of database: 114,650
effective HSP length: 59
effective length of query: 391
effective length of database: 95,947
effective search space: 37515277
effective search space used: 37515277
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)