Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002103-TA|BGIBMGA002103-PA|IPR000217|Tubulin,
IPR002452|Alpha tubulin, IPR003008|Tubulin/FtsZ, GTPase,
IPR008280|Tubulin/FtsZ, C-terminal
(450 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 161 4e-41
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 161 4e-41
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 161 4e-41
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 161 4e-41
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 48 4e-07
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi... 24 7.3
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 161 bits (391), Expect = 4e-41
Identities = 73/186 (39%), Positives = 111/186 (59%)
Query: 107 HYTIGKEIVDLVLDRVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSK 166
HYT G E+VD VLD VRK + C LQGF + LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 167 LEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDAAFMVDNEAIYDICRRNLDIERPTYTN 226
+++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 227 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQL 286
LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL 180
Query: 287 SVAEIT 292
+V E+T
Sbjct: 181 TVPELT 186
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 161 bits (391), Expect = 4e-41
Identities = 73/186 (39%), Positives = 111/186 (59%)
Query: 107 HYTIGKEIVDLVLDRVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSK 166
HYT G E+VD VLD VRK + C LQGF + LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 167 LEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDAAFMVDNEAIYDICRRNLDIERPTYTN 226
+++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 227 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQL 286
LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL 180
Query: 287 SVAEIT 292
+V E+T
Sbjct: 181 TVPELT 186
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 161 bits (391), Expect = 4e-41
Identities = 73/186 (39%), Positives = 111/186 (59%)
Query: 107 HYTIGKEIVDLVLDRVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSK 166
HYT G E+VD VLD VRK + C LQGF + LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 167 LEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDAAFMVDNEAIYDICRRNLDIERPTYTN 226
+++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 227 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQL 286
LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL 180
Query: 287 SVAEIT 292
+V E+T
Sbjct: 181 TVPELT 186
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 161 bits (391), Expect = 4e-41
Identities = 73/186 (39%), Positives = 111/186 (59%)
Query: 107 HYTIGKEIVDLVLDRVRKLADQCTGLQGFLIXXXXXXXXXXXXXXLLMERLSVDYGKKSK 166
HYT G E+VD VLD VRK + C LQGF + LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 167 LEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDAAFMVDNEAIYDICRRNLDIERPTYTN 226
+++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDIC R L + P+Y +
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 227 LNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQL 286
LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S + L
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRAL 180
Query: 287 SVAEIT 292
+V E+T
Sbjct: 181 TVPELT 186
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 48.4 bits (110), Expect = 4e-07
Identities = 18/22 (81%), Positives = 20/22 (90%)
Query: 1 MRECISIHAGQAGVQIGNACWE 22
MRECIS+H GQAGVQIGN CW+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
protein I protein.
Length = 1340
Score = 24.2 bits (50), Expect = 7.3
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFV 405
T + D+AKV+ AV + + ++ + +N+ +DL A A +
Sbjct: 991 TALLENDIAKVKHAVVIQNGMNYLSNQLAFINNPYDLSIATYAMM 1035
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.320 0.137 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,973
Number of Sequences: 2123
Number of extensions: 19218
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27
Number of HSP's gapped (non-prelim): 6
length of query: 450
length of database: 516,269
effective HSP length: 66
effective length of query: 384
effective length of database: 376,151
effective search space: 144441984
effective search space used: 144441984
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)
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