GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002102-TA|BGIBMGA002102-PA|undefined
         (222 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0RBX5 Cluster: Putative uncharacterized protein; n=1; ...    34   3.2  
UniRef50_Q6D2I4 Cluster: Exo-poly-alpha-D-galacturonosidase; n=2...    32   9.8  

>UniRef50_Q0RBX5 Cluster: Putative uncharacterized protein; n=1;
           Frankia alni ACN14a|Rep: Putative uncharacterized
           protein - Frankia alni (strain ACN14a)
          Length = 946

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 18/50 (36%), Positives = 24/50 (48%)

Query: 135 VDAGIRAHQRPYFGRKEHPIDIVGLALRLYSTLLIICTTTYEAEGDGSAR 184
           V+A I A QR +FG   +P  I G  +R+ S  L +CT      G    R
Sbjct: 834 VEAEIIAQQREWFGGGGYPSGIAGSRIRMESRALAVCTAWAAMRGGRGGR 883


>UniRef50_Q6D2I4 Cluster: Exo-poly-alpha-D-galacturonosidase; n=2;
           Enterobacteriaceae|Rep:
           Exo-poly-alpha-D-galacturonosidase - Erwinia carotovora
           subsp. atroseptica (Pectobacterium atrosepticum)
          Length = 659

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 136 DAGIRAHQRPYFGRKEHPIDIVGLALRLYSTLLIICTTTYEAEGDGSARAARPTIPSRYS 195
           D G+R   RPY+G     +     A+R       + T  Y+A+ + +  AA P       
Sbjct: 488 DVGLRMKSRPYYGGGSRDVVFRNNAMRDIVNEPFVFTIKYKADVNDTQPAAEPA----QF 543

Query: 196 RDLIYEYIDWSRTPAQHSRLVDVLAV 221
           RD+    +    +P ++S +VD + V
Sbjct: 544 RDVTVSNVTVDGSPKKNSIMVDGMTV 569


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.328    0.140    0.440 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,921,488
Number of Sequences: 1657284
Number of extensions: 7146423
Number of successful extensions: 15842
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 15841
Number of HSP's gapped (non-prelim): 2
length of query: 222
length of database: 575,637,011
effective HSP length: 98
effective length of query: 124
effective length of database: 413,223,179
effective search space: 51239674196
effective search space used: 51239674196
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 70 (32.3 bits)