GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002101-TA|BGIBMGA002101-PA|undefined
         (145 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   2.5  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   4.4  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    20   7.6  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 10/35 (28%), Positives = 20/35 (57%)

Query: 66  MLLEEINRLAITKYADLRSLAANLNKTLNEYNEMY 100
           ++L+ ++R  +       +LA  LN+T+N YN  +
Sbjct: 184 VILDNMSRNHLFLVRRTETLAQILNQTVNFYNSAF 218


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 6/19 (31%), Positives = 14/19 (73%)

Query: 82  LRSLAANLNKTLNEYNEMY 100
           + SLA  L  T++++N+++
Sbjct: 182 IESLACELKNTVDDFNDIF 200


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)

Query: 130 SYTKQLKARFKELEE 144
           +Y   LK RFKEL++
Sbjct: 181 NYALALKNRFKELQK 195


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.313    0.127    0.346 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,160
Number of Sequences: 317
Number of extensions: 806
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 145
length of database: 114,650
effective HSP length: 51
effective length of query: 94
effective length of database: 98,483
effective search space:  9257402
effective search space used:  9257402
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.0 bits)
S2: 40 (20.2 bits)