Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002101-TA|BGIBMGA002101-PA|undefined
(145 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59625| Best HMM Match : P19Arf_N (HMM E-Value=5.1) 31 0.28
SB_29591| Best HMM Match : ARD (HMM E-Value=0.91) 30 0.86
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 30 0.86
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 29 2.0
SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_32477| Best HMM Match : DUF593 (HMM E-Value=0.41) 27 4.6
SB_8003| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.6
SB_54268| Best HMM Match : Vicilin_N (HMM E-Value=0.077) 27 4.6
SB_36660| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.6
SB_58293| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_13412| Best HMM Match : PAN (HMM E-Value=0.029) 27 6.1
SB_59345| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_5683| Best HMM Match : SAND (HMM E-Value=0.073) 27 8.1
SB_19266| Best HMM Match : Endonuclease_7 (HMM E-Value=0.51) 27 8.1
>SB_59625| Best HMM Match : P19Arf_N (HMM E-Value=5.1)
Length = 1463
Score = 31.5 bits (68), Expect = 0.28
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 9 EKWTRDGRNKELEMSPSCSSFEVLDPHDPVISRLATQLFKKT 50
+ W + +K +E S F V HDP A + F+KT
Sbjct: 870 QNWIKSSSSKRVEKSKFLEEFSVASIHDPAFHLTAEEYFEKT 911
>SB_29591| Best HMM Match : ARD (HMM E-Value=0.91)
Length = 360
Score = 29.9 bits (64), Expect = 0.86
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 32 LDPHDPVISRL--ATQLFKKTTDYLQAEMVAGQEHYMLLEEINRLAITKYA 80
L+P D R+ + + F K DYL E +HY ++E+ NR+ I ++
Sbjct: 166 LNPQDKKPQRVKKSDKAFVKELDYLGVEFPVTVKHYNIIEKQNRININVFS 216
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 29.9 bits (64), Expect = 0.86
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Query: 5 TEDIEKWTRDGRNKELEMSPSCSSFEVLDPHDPVISRLATQLFKKTTDYLQAEMVAGQEH 64
T++IE+ + +E E + ++ H + RL +L + +A+ Q H
Sbjct: 181 TKEIEE-LKQALEEEKEEFTVATLDDLAQKHASEMMRLRDELNQLMVQADEAKNQMRQSH 239
Query: 65 YMLLEEINRLAITKYADLRSLAANLNKTLNEYNEMYA 101
+EE+NR +Y + SL A+L N + +A
Sbjct: 240 MAEIEEMNRKMAREYQKIESLRADLEGAHNSSAQEHA 276
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 28.7 bits (61), Expect = 2.0
Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Query: 7 DIEKWTRDGRNKELEMSPSCSSFEVLDPH-DPVISRLATQLFKKTTDYLQAEMVAGQEHY 65
DIE + R+ NK+LE + E L+ + ++T + T+Y+ + H
Sbjct: 2951 DIENYKRELENKDLECQGYITEIEHLNQEIFRLKGMVSTDTNRYHTEYVLGPRESPVSHE 3010
Query: 66 MLLEEINRLAITKYADLRSLAANLNKTLNEYNEMY 100
+++ E R + L S AN K N +
Sbjct: 3011 LIISEPTRKVNIQETGLSSFVANKYKIAIRLNRFH 3045
>SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1967
Score = 28.7 bits (61), Expect = 2.0
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 62 QEHYMLLEEINRLAITKYADLRSLAANLNKTLNEYNEMYAXXXXXXXXXXXXXEVQVSKF 121
+ HY EE+N K +L SL +L + + E+ +VQV ++
Sbjct: 1029 ESHY---EELNHSRSEKNTELESLRTSLEASEGKVKEL-RLQLVAKDSDFEKLKVQVGEY 1084
Query: 122 EVNAYRLDSYTKQLKARFKELEEK 145
E L+S + +L+ KE+E K
Sbjct: 1085 EDLKLTLESMSSKLEQTVKEVEIK 1108
>SB_32477| Best HMM Match : DUF593 (HMM E-Value=0.41)
Length = 214
Score = 27.5 bits (58), Expect = 4.6
Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Query: 7 DIEKWTRDGRNKELEMSPSCSSFEVLDPH-DPVISRLATQLFKKTTDYLQAEMVAGQEHY 65
DIE + R+ NK+LE + E L+ + ++T + T+Y+ + H
Sbjct: 94 DIENYKRELENKDLECQGYITEIEHLNQEIFRLKGMVSTDTNRYHTEYVLGPRESPVSHE 153
Query: 66 MLLEEINRLAITKYADLRSLAANLNKTLNEYNEMY 100
+++ E + + L S AN K N +
Sbjct: 154 LIISEPTKKVNIQETGLSSFVANKYKIAIRLNRFH 188
>SB_8003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 27.5 bits (58), Expect = 4.6
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 3 LSTEDIEKWTR-DGRNKELEMSPSCSSFEVLDPHDPVISRLATQLFKKTTD 52
+ +E + +W N + + P C S E PH+P+ S A +LF+ D
Sbjct: 25 IHSECLTQWNNAQAANNQQQTCPFCRSDE---PHNPIQSPYAARLFQTMDD 72
>SB_54268| Best HMM Match : Vicilin_N (HMM E-Value=0.077)
Length = 371
Score = 27.5 bits (58), Expect = 4.6
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Query: 1 MSLSTEDIEKWTRDGRNKELEMSPSCSSFEVLDPHDPVISRLATQLFKKTTDYLQAEMV- 59
M + +++W R+ + KELE S S V D + QL + D+ EM
Sbjct: 296 MQHKEQRLQEWEREFQQKELEFSSSLERLRV--DMDSDYRQQMGQLESRLEDHYSREMQG 353
Query: 60 AGQEHYMLLEEINRLA 75
H LEE +R A
Sbjct: 354 VVARHQEQLEEADRSA 369
>SB_36660| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1021
Score = 27.5 bits (58), Expect = 4.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 15 GRNKELEMSPSCSSFEVLDPHDP 37
G NK++E + S ++ EV DP++P
Sbjct: 827 GVNKDIERAESVTTMEVTDPYNP 849
>SB_58293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 27.1 bits (57), Expect = 6.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 64 HYMLLEEINRLAITKYADLRSLAANLNKTLNEYNEMYA 101
H L E+ ++ + YAD+R NLNK L YA
Sbjct: 129 HVNLPRELVKMENSVYADIRDGKCNLNKLLRRSTTGYA 166
>SB_13412| Best HMM Match : PAN (HMM E-Value=0.029)
Length = 119
Score = 27.1 bits (57), Expect = 6.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 64 HYMLLEEINRLAITKYADLRSLAANLNKTLNEYNEMYA 101
H L E+ ++ + YAD+R NLNK L YA
Sbjct: 77 HVNLPRELVKMENSVYADIREGKCNLNKLLRRSTTGYA 114
>SB_59345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 26.6 bits (56), Expect = 8.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 76 ITKYADLRSLAANLNKTLNEYN 97
IT Y +L SL +NKT+ EY+
Sbjct: 105 ITLYTELTSLEMGVNKTVTEYS 126
>SB_5683| Best HMM Match : SAND (HMM E-Value=0.073)
Length = 311
Score = 26.6 bits (56), Expect = 8.1
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 58 MVAGQEHYMLLEEINRLAITKYADLRSLAANLNKTLNEYN 97
M A EHY++ E+ N+L KY RS K NE N
Sbjct: 1 MDALDEHYLIFEDTNKL---KYNRFRSTEFPPEKECNEQN 37
>SB_19266| Best HMM Match : Endonuclease_7 (HMM E-Value=0.51)
Length = 241
Score = 26.6 bits (56), Expect = 8.1
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 36 DPVISRLATQLFKKTTDYLQAEMV-----AGQEHYMLLEEINRLAITKYADLRSLAANLN 90
D ++S L+ + FK T Y + E + G Y + N+L TK + + LN
Sbjct: 131 DSLVSNLSKESFKNLTSYYEGEQLQLLLRKGVFPYDWFGDFNKLIATKLPPKEAFYSRLN 190
Query: 91 KT 92
T
Sbjct: 191 DT 192
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.127 0.346
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,797,469
Number of Sequences: 59808
Number of extensions: 115800
Number of successful extensions: 195
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 188
Number of HSP's gapped (non-prelim): 14
length of query: 145
length of database: 16,821,457
effective HSP length: 76
effective length of query: 69
effective length of database: 12,276,049
effective search space: 847047381
effective search space used: 847047381
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 56 (26.6 bits)
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