GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002100-TA|BGIBMGA002100-PA|undefined
         (135 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2E9K0 Cluster: Putative uncharacterized protein; n=1; ...    35   0.65 
UniRef50_A0DEW6 Cluster: Chromosome undetermined scaffold_48, wh...    33   2.6  
UniRef50_A6EWZ2 Cluster: Beta-ketoacyl synthase; n=1; Marinobact...    32   4.6  
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu...    31   6.1  
UniRef50_Q2U266 Cluster: Predicted protein; n=2; Aspergillus|Rep...    31   6.1  
UniRef50_A0QP86 Cluster: Aldehyde dehydrogenase family protein; ...    31   8.0  

>UniRef50_A2E9K0 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 545

 Score = 34.7 bits (76), Expect = 0.65
 Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 4/85 (4%)

Query: 44  QYVAVCPSPRKNSGRTRTWPSYAAEDSPALKKNSHSAPMRGEEIKTNIRCDTIQQEAIIL 103
           Q  A  P   K S + +  P Y    SP  K N    P   E I+ N+R D +  E++  
Sbjct: 132 QQAAQRPPAPKPSPKKQAQPKYTPPASPVKKSN----PKWDETIRNNMRGDLLALESLDT 187

Query: 104 IVTISMLSDRPAATGQCALNFGDLK 128
              I  L D   A G+  ++F D++
Sbjct: 188 EEEIDKLLDYLEAIGKANISFDDVQ 212


>UniRef50_A0DEW6 Cluster: Chromosome undetermined scaffold_48, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_48,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 331

 Score = 32.7 bits (71), Expect = 2.6
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 69  DSPALKKNSHSAPMRGEEIKTNIRCDTIQQEAI 101
           D    K  S S+PMRG   KTN+ C   +QE I
Sbjct: 152 DRKKTKHPSDSSPMRGTRKKTNLECQLYEQEQI 184


>UniRef50_A6EWZ2 Cluster: Beta-ketoacyl synthase; n=1; Marinobacter
            algicola DG893|Rep: Beta-ketoacyl synthase - Marinobacter
            algicola DG893
          Length = 2227

 Score = 31.9 bits (69), Expect = 4.6
 Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 6/77 (7%)

Query: 31   VQPVVGAPLGTKVQYVAVC-PSPRKNSGRTRTWPSYAAEDSPALKKNSHSAPMRGEEIKT 89
            V P  G P   + Q  AV  PSP   + + RT  + +++D+P+  K +H+   R    KT
Sbjct: 1674 VSPAQGVP---QTQQAAVSSPSPAAATNKERTSANESSDDAPS--KPAHTPGTRITREKT 1728

Query: 90   NIRCDTIQQEAIILIVT 106
            N    + Q+E I  ++T
Sbjct: 1729 NTEITSAQREWIDRLMT 1745


>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
           organisms|Rep: ATP-dependent RNA helicase -
           Gluconobacter oxydans (Gluconobacter suboxydans)
          Length = 793

 Score = 31.5 bits (68), Expect = 6.1
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 9/86 (10%)

Query: 37  APLGTKVQYVAVCPSPRKNSGRTRTWPSYAAEDSPAL--KKNSHSAPMRGEEIKTNIRC- 93
           AP+   V+  A CPS RK S      P  AAE++PA+  +      P+R    K      
Sbjct: 207 APVEAPVEKKA-CPSRRKASAPVVETPEPAAEETPAVQAEPTKSEKPVRRRRTKAATATP 265

Query: 94  ----DTIQQEAII-LIVTISMLSDRP 114
               +T++  A++  +V    +SDRP
Sbjct: 266 AVVEETVEAPAVVETVVVAEDVSDRP 291


>UniRef50_Q2U266 Cluster: Predicted protein; n=2; Aspergillus|Rep:
            Predicted protein - Aspergillus oryzae
          Length = 1224

 Score = 31.5 bits (68), Expect = 6.1
 Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 4/70 (5%)

Query: 50   PSPRKNSGRTRTWPSYAAEDSPALKKNSHSAPMRGEEIKTNIRCDTIQQEAIILIVTISM 109
            PSPR+ SGR RT  SY ++D P +     + P +G++ K +   D+   + II  +T S 
Sbjct: 1102 PSPRR-SGRVRTRKSYPSQDDPMVSAAMGNVP-QGKQ-KISGTHDSSAPQGII-DLTQSS 1157

Query: 110  LSDRPAATGQ 119
             +  P  +GQ
Sbjct: 1158 PAGSPGGSGQ 1167


>UniRef50_A0QP86 Cluster: Aldehyde dehydrogenase family protein;
           n=14; Mycobacterium|Rep: Aldehyde dehydrogenase family
           protein - Mycobacterium smegmatis (strain ATCC 700084 /
           mc(2)155)
          Length = 497

 Score = 31.1 bits (67), Expect = 8.0
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 2/74 (2%)

Query: 30  TVQPVVGAPLGTKVQYVAVCPSPRKNSGRTRTWPSYAAEDSPA-LKKNSHSAPMRGEEIK 88
           T + V  APL TK    A C + RK +     WP    ++  A L K +       +E K
Sbjct: 43  TGEKVGQAPLATKADVDAACAAARK-AFDEGPWPRMTPQEREAVLAKATALIEESADEFK 101

Query: 89  TNIRCDTIQQEAII 102
           T ++ +T Q + I+
Sbjct: 102 TLLKLETGQPQTIV 115


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.317    0.130    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,698,002
Number of Sequences: 1657284
Number of extensions: 4278992
Number of successful extensions: 9040
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 9037
Number of HSP's gapped (non-prelim): 7
length of query: 135
length of database: 575,637,011
effective HSP length: 92
effective length of query: 43
effective length of database: 423,166,883
effective search space: 18196175969
effective search space used: 18196175969
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 67 (31.1 bits)