GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002100-TA|BGIBMGA002100-PA|undefined
         (135 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC080554-1|AAH80554.1|  659|Homo sapiens splicing factor, argini...    30   2.2  
AY358944-1|AAQ89303.1|  594|Homo sapiens SWAP2 protein.                30   2.2  
AF042810-1|AAC82340.1|  659|Homo sapiens suppressor of white-apr...    30   2.2  
AF042800-1|AAC82339.1|  659|Homo sapiens suppressor of white apr...    30   2.2  
BC013322-1|AAH13322.1|  280|Homo sapiens C14orf104 protein protein.    29   3.9  
BC011400-1|AAH11400.1|  280|Homo sapiens C14orf104 protein protein.    29   3.9  

>BC080554-1|AAH80554.1|  659|Homo sapiens splicing factor,
           arginine/serine-rich 16 protein.
          Length = 659

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 21/65 (32%), Positives = 26/65 (40%)

Query: 57  GRTRTWPSYAAEDSPALKKNSHSAPMRGEEIKTNIRCDTIQQEAIILIVTISMLSDRPAA 116
           GR  + PSYA  DSP       S      E ++  R  T  +E  I  +T    SD  AA
Sbjct: 266 GRKISPPSYARRDSPTYDPYKRSPSESSSESRSRSRSPTPGREEKITFITSFGGSDEEAA 325

Query: 117 TGQCA 121
               A
Sbjct: 326 AAAAA 330


>AY358944-1|AAQ89303.1|  594|Homo sapiens SWAP2 protein.
          Length = 594

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 21/65 (32%), Positives = 26/65 (40%)

Query: 57  GRTRTWPSYAAEDSPALKKNSHSAPMRGEEIKTNIRCDTIQQEAIILIVTISMLSDRPAA 116
           GR  + PSYA  DSP       S      E ++  R  T  +E  I  +T    SD  AA
Sbjct: 281 GRKISPPSYARRDSPTYDPYKRSPSESSSESRSRSRSPTPGREEKITFITSFGGSDEEAA 340

Query: 117 TGQCA 121
               A
Sbjct: 341 AAAAA 345


>AF042810-1|AAC82340.1|  659|Homo sapiens suppressor of
           white-apricot homolog 2 protein.
          Length = 659

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 21/65 (32%), Positives = 26/65 (40%)

Query: 57  GRTRTWPSYAAEDSPALKKNSHSAPMRGEEIKTNIRCDTIQQEAIILIVTISMLSDRPAA 116
           GR  + PSYA  DSP       S      E ++  R  T  +E  I  +T    SD  AA
Sbjct: 266 GRKISPPSYARRDSPTYDPYKRSPSESSSESRSRSRSPTPGREEKITFITSFGGSDEEAA 325

Query: 117 TGQCA 121
               A
Sbjct: 326 AAAAA 330


>AF042800-1|AAC82339.1|  659|Homo sapiens suppressor of white
           apricot homolog 2 protein.
          Length = 659

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 21/65 (32%), Positives = 26/65 (40%)

Query: 57  GRTRTWPSYAAEDSPALKKNSHSAPMRGEEIKTNIRCDTIQQEAIILIVTISMLSDRPAA 116
           GR  + PSYA  DSP       S      E ++  R  T  +E  I  +T    SD  AA
Sbjct: 266 GRKISPPSYARRDSPTYDPYKRSPSESSSESRSRSRSPTPGREEKITFITSFGGSDEEAA 325

Query: 117 TGQCA 121
               A
Sbjct: 326 AAAAA 330


>BC013322-1|AAH13322.1|  280|Homo sapiens C14orf104 protein protein.
          Length = 280

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 26  SRLPTVQPVVGAPLGTKVQYVAVCPSPRKNSGRTRTWPSYAAEDSPALKKNSHSAPMRGE 85
           ++L T +PV+       V  +A  P   ++ G  R W      DS  L++ S+S  ++G+
Sbjct: 69  NKLSTTEPVISISSNNAVIELAKSP---ESHGHWREWYYGVNNDSLELQECSNSDQLQGK 125

Query: 86  EIKTNIRCDTIQQEAI 101
           E + N      ++E I
Sbjct: 126 EERVNEESHLTEKEYI 141


>BC011400-1|AAH11400.1|  280|Homo sapiens C14orf104 protein protein.
          Length = 280

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 26  SRLPTVQPVVGAPLGTKVQYVAVCPSPRKNSGRTRTWPSYAAEDSPALKKNSHSAPMRGE 85
           ++L T +PV+       V  +A  P   ++ G  R W      DS  L++ S+S  ++G+
Sbjct: 69  NKLSTTEPVISISSNNAVIELAKSP---ESHGHWREWYYGVNNDSLELQECSNSDQLQGK 125

Query: 86  EIKTNIRCDTIQQEAI 101
           E + N      ++E I
Sbjct: 126 EERVNEESHLTEKEYI 141


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.317    0.130    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,009,994
Number of Sequences: 224733
Number of extensions: 571489
Number of successful extensions: 1089
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1085
Number of HSP's gapped (non-prelim): 6
length of query: 135
length of database: 73,234,838
effective HSP length: 82
effective length of query: 53
effective length of database: 54,806,732
effective search space: 2904756796
effective search space used: 2904756796
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)