GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002099-TA|BGIBMGA002099-PA|IPR011032|GroES-like,
IPR002085|Alcohol dehydrogenase superfamily, zinc-containing,
IPR013154|Alcohol dehydrogenase GroES-like
         (380 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    27   0.22 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   3.6  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   4.8  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 27.1 bits (57), Expect = 0.22
 Identities = 15/41 (36%), Positives = 21/41 (51%)

Query: 212 YFKREEYNDRISIAVATLKDEGFLLAKECEEVNVVQWNEDL 252
           Y  RE YN  IS  V TLK +    A    E+ V+Q+ + +
Sbjct: 355 YVPREVYNKEISRLVETLKFQSITSAVVTYELIVIQFRKKM 395


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 11/21 (52%), Positives = 12/21 (57%)

Query: 348 HSVYPAEEAAEVVRKLCNSEI 368
           H VYP E A EVV K    E+
Sbjct: 211 HLVYPFEAAREVVAKNRRGEL 231


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 11/21 (52%), Positives = 12/21 (57%)

Query: 348 HSVYPAEEAAEVVRKLCNSEI 368
           H VYP E A E+V K    EI
Sbjct: 211 HLVYPFEGAREIVDKNRRGEI 231


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.137    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,609
Number of Sequences: 317
Number of extensions: 3167
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 3
length of query: 380
length of database: 114,650
effective HSP length: 58
effective length of query: 322
effective length of database: 96,264
effective search space: 30997008
effective search space used: 30997008
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)