Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002099-TA|BGIBMGA002099-PA|IPR011032|GroES-like,
IPR002085|Alcohol dehydrogenase superfamily, zinc-containing,
IPR013154|Alcohol dehydrogenase GroES-like
(380 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces pombe... 46 7e-06
SPBC16A3.02c |||mitochondrial peptidase |Schizosaccharomyces pom... 39 0.001
SPCC1442.16c |zta1|SPCC285.01c|NADPH quinone oxidoreductase/ARE-... 36 0.009
SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce... 29 1.4
SPAC31G5.02 |||conserved fungal protein|Schizosaccharomyces pomb... 27 4.4
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 26 7.7
>SPBC1773.06c |||alcohol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 346
Score = 46.4 bits (105), Expect = 7e-06
Identities = 52/247 (21%), Positives = 103/247 (41%), Gaps = 24/247 (9%)
Query: 133 YAEYIVVPDFKCLVPIPDQLPLSIAAMLPTGALLAMNTVVSASECLKVALEGPAKKDKTT 192
+ +Y V+P LV P L A LP A+ A N + + E K
Sbjct: 118 FQKYAVLPAH-ALVHAPKNLSFEEIATLPCAAVTAWNGLFGSKE--------HQVKPGNN 168
Query: 193 VLIVGTGGLALWALRLATYYFKREEYNDRISIAVATLKDEGFLLAKECEEVNVVQWNEDL 252
VL++GTGG++ +AL+ A ++ V + DE AK+ + + + +
Sbjct: 169 VLVLGTGGVSTFALQFALAA--------GANVTVTSSSDEKLEFAKKLGATHTINYKKTP 220
Query: 253 YEKQLIERTTDACGGPVDVVLNFGTTSRSLHRSLQCLAPEGVV----LVTEDVGERLLSK 308
+ T+ G V+ G ++L +S+ CLA +G++ V + L+
Sbjct: 221 QWASPALKMTNGVG--YHHVIEVGG-EKTLPQSIACLAKDGMISMIGFVASEGTTPNLTS 277
Query: 309 FAKKAEDLSVSVVVVPNGTIEQLKELVSLVARGDIEPPPHSVYPAEEAAEVVRKLCNSEI 368
+ + + ++ + G++ +++V+ + DI P V+P ++ E +
Sbjct: 278 IIGQILNRNANIRGIFVGSVSMFRDMVACIEAKDIHPVVDKVFPFDQLKEAYEYQWSQAH 337
Query: 369 KGRAILK 375
G+ +LK
Sbjct: 338 IGKVVLK 344
>SPBC16A3.02c |||mitochondrial peptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 347
Score = 38.7 bits (86), Expect = 0.001
Identities = 66/292 (22%), Positives = 111/292 (38%), Gaps = 36/292 (12%)
Query: 94 PGYEVAGIIDAIGKAAERTDELKEGARIVLYPYEGVPHGYAEYIVVPDFKCLVPIPDQLP 153
PGY+ AG + A+G + + +P G G +V K + +PD +
Sbjct: 80 PGYDFAGRVLAVGSEVKEFSATQRVWGCQSFPRAGRQGGSCATHIVTGDKDVWHLPDGVS 139
Query: 154 LSIAAMLPTGALLAMNTVVSASECLKVALEGPAKKDKTTVLIVG-TGGLALWALRLATYY 212
+ A L A +V +KV K T ++I G +GG+ +A+ LA
Sbjct: 140 FNEGAGFGIAGLTAWEVLVRQ---MKV-------KPGTKLVIEGASGGVGTFAVALAK-- 187
Query: 213 FKREEYNDRISIAVATLKD-EGFLLAKECEEVNVVQWNEDLYEKQLIERTTDACGGPVDV 271
+ V T+ E L K + + + +D L+ER D GP D
Sbjct: 188 --------ALECEVTTISSTENLDLCKSLGATHTLDYKKD----NLVERLADL--GPYDF 233
Query: 272 VLNFGTTSRSLHRSLQCLAPEGVV------LVTEDVGERLLSKFAKKAEDLSVSVV--VV 323
V + + S + + P+G + VG RL + S ++
Sbjct: 234 VFDCVNDNVLYRASSKFVKPDGAFFGIGGDITLSYVGSRLSRTLRPRVLGGSSHSYYNIL 293
Query: 324 PNGTIEQLKELVSLVARGDIEPPPHSVYPAEEAAEVVRKLCNSEIKGRAILK 375
+ E L++ V V + +I+ SVY E+ E +L KG+ I+K
Sbjct: 294 LHVDQEMLRDFVDFVMKHNIKTVIDSVYDFEDTVEAFNRLMTHRCKGKVIIK 345
>SPCC1442.16c |zta1|SPCC285.01c|NADPH quinone
oxidoreductase/ARE-binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 329
Score = 35.9 bits (79), Expect = 0.009
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 94 PGYEVAGIIDAIGKAAERTDELKEGARIV-LYPYEGVPHGYAEYIVVPDFKCLVPIPDQL 152
PG E AG++ A+G E + K G R+V L P+ YA+Y VP + + +++
Sbjct: 61 PGKEAAGVVAAVGDKVEA--DFKVGDRVVYLTPF----GAYAQYTNVPT-TLVSKVSEKI 113
Query: 153 PLSIAAMLPTGALLAMNTVVSASECLKVALEGPAKKDKTTVLIVGTGGLAL 203
PL IA+ L A + A P K T V+ GG+ L
Sbjct: 114 PLKIASAALLQGLTAYTLIEEAY---------PVKTGDTVVVHAAAGGVGL 155
>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2310
Score = 28.7 bits (61), Expect = 1.4
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 271 VVLNFGTTSRSLHRSLQCLAPEGVVLVTEDVGERLLSKFAKKAEDLSVSVVVVPNGTIEQ 330
VV +F TTSRS+ RSL LA + D+ ++L+ K+ + + +G EQ
Sbjct: 2017 VVKSF-TTSRSIFRSLFSLAVVDTTTIYSDIEQQLIDSLDKR-QPYDFLCIEAASGQTEQ 2074
Query: 331 L 331
+
Sbjct: 2075 I 2075
>SPAC31G5.02 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 232
Score = 27.1 bits (57), Expect = 4.4
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 159 MLPTGALLAMNTVVSASECLKVALEGPAKKDKTTVLIVGTGGLALWAL 206
MLPT + A+NT+ +A++ L A+K T+ VG G +A+ ++
Sbjct: 180 MLPTSTI-AVNTIQTAAKRWTAPLVPLAQKHTNTIWWVGLGLIAIGSI 226
>SPBC3F6.05 |rga1||GTPase activating protein
Rga1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1150
Score = 26.2 bits (55), Expect = 7.7
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 310 AKKAEDLSVSVVVVPNGTIEQLKELVSLVARGDIEP 345
A K +D+SV V NG I +LKEL ++ D+ P
Sbjct: 871 AMKRKDMSVVGVFRKNGNIRRLKELSDML---DVSP 903
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.137 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,581,637
Number of Sequences: 5004
Number of extensions: 61417
Number of successful extensions: 160
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 155
Number of HSP's gapped (non-prelim): 7
length of query: 380
length of database: 2,362,478
effective HSP length: 74
effective length of query: 306
effective length of database: 1,992,182
effective search space: 609607692
effective search space used: 609607692
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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