Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002099-TA|BGIBMGA002099-PA|IPR011032|GroES-like,
IPR002085|Alcohol dehydrogenase superfamily, zinc-containing,
IPR013154|Alcohol dehydrogenase GroES-like
(380 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1140 + 34386042-34386302,34386738-34386917,34386999-343870... 40 0.003
03_03_0032 + 13927959-13930040,13930322-13930798 35 0.12
08_02_0503 - 17848739-17849004,17849109-17849268,17849368-178496... 32 0.66
11_05_0078 - 18906900-18907082,18907104-18907337,18907429-189076... 31 1.2
06_03_0052 - 16027570-16027617,16027789-16027795,16028103-160283... 31 1.2
11_06_0759 + 27008772-27009571,27010457-27010576,27011683-270119... 31 2.0
01_06_0276 - 28084746-28085003,28085103-28085357,28085531-280857... 30 2.7
08_01_0510 + 4455805-4456637,4457837-4457912 29 4.7
06_01_0227 - 1733119-1734099 29 4.7
11_04_0039 + 12679350-12680057,12680136-12680582,12680670-126815... 29 6.2
08_02_1050 + 23949828-23949981,23950083-23950534,23951599-239516... 29 6.2
03_05_0010 + 19622430-19622512,19622539-19623082,19623361-196237... 29 6.2
01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794 29 6.2
11_01_0788 + 6599962-6602700 29 8.2
06_03_0783 - 24546403-24546765,24547202-24547262,24547899-245480... 29 8.2
>02_05_1140 +
34386042-34386302,34386738-34386917,34386999-34387080,
34387180-34387287,34387442-34387630,34387814-34388010
Length = 338
Score = 40.3 bits (90), Expect = 0.003
Identities = 69/294 (23%), Positives = 124/294 (42%), Gaps = 31/294 (10%)
Query: 93 FPGYEVAGIIDAIGKAAERTDELKEGARIVLYPYEGVPHGYAEYIVVPDFKCLVPIPDQL 152
+PG E +G I A+G G ++ G GYAE +VVP + L+P+P+ +
Sbjct: 62 YPGLECSGTILALGPNVP--SRWAVGDQVCALLSSG---GYAEKVVVPAGQ-LLPVPEGV 115
Query: 153 PLSIAAMLPTGALLAMNTVVSASECLKVALEGPAKKDKTTVLIVGTGGLALWALRLATYY 212
L+ AA LP A +TV S ++ ++ G+ G+ +A+++A +
Sbjct: 116 SLTDAAGLPEVACTVWSTVFVTSH---------LSPSESFLIHGGSSGIGTFAIQIAKHL 166
Query: 213 FKREEYNDRISIAVATLKDEGF-LLAKECEEVNVVQWNEDLYEKQLIERTTDACGGPVDV 271
+ +A K G + E V + E+ K ++ G VDV
Sbjct: 167 GIKVFVTAGSEEKLAACKGLGADVCINYKTEDFVARVKEETNGKVTLDMEVYLPG--VDV 224
Query: 272 VL-NFGTTSRSLHRSLQCLAPEGVVLVTEDVGERL--LSKFAKKAEDLSVSVVVVPNGTI 328
+L N G L R+L LA +G + + G + ++ A L++ + N ++
Sbjct: 225 ILDNIG--GLYLQRNLNSLAVDGRLFIIGFQGGAVTEVNLQPMLARRLTIQAAGLRNRSL 282
Query: 329 EQLKELVS--------LVARGDIEPPPHSVYPAEEAAEVVRKLCNSEIKGRAIL 374
+ +VS V +G ++P + +P EAAE + + S G+ +L
Sbjct: 283 DNKALIVSEVEKNVWPAVVQGKVKPVIYKTFPLSEAAEAHKLMEESSHIGKILL 336
>03_03_0032 + 13927959-13930040,13930322-13930798
Length = 852
Score = 34.7 bits (76), Expect = 0.12
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 249 NEDLYEKQLIERTTDACGGPVDVVLNFGTTSRSLHRSLQCL---APEGVVLVTEDVGERL 305
+E L +++++ DA G D + GT++RS+ R ++ L PE + ++
Sbjct: 361 DEQLIGVRILQQFADAKGSARDTLRKVGTSARSIERLVEMLNWKRPEEEEV--RWCAAQV 418
Query: 306 LSKFAKKAEDLSVSVVVVPNGTIEQLKELVSLVARGDIEPPPHSVYPA 353
+SK A K ++ ++ V +P G IE + L+ + PH V PA
Sbjct: 419 VSKLAGKRQN-ALRVSGIP-GAIESVMSLLYAGWSAPVSATPHDVSPA 464
>08_02_0503 -
17848739-17849004,17849109-17849268,17849368-17849691,
17849787-17850209
Length = 390
Score = 32.3 bits (70), Expect = 0.66
Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 20/126 (15%)
Query: 94 PGYEVAGIIDAIGKAAERTDELKEGARIVLYPYEGVPHG------YAEYIVVPDFKCLVP 147
PGY+VAG+ + KA + LKEG + E G AEY V + K L
Sbjct: 144 PGYDVAGV---VVKAGRKVKGLKEGDEVYGNISEKALEGPKQSGSLAEYTAVEE-KLLAL 199
Query: 148 IPDQLPLSIAAMLPTGALLAMNTVVSASECLKVALEGPAKKDKTTVLIVGTGGLALWALR 207
P L + AA LP LA+ T A E L+ A K+ +++ G GG+ A++
Sbjct: 200 KPKSLGFAQAAGLP----LAIET---AHEGLERA---GFSAGKSILILGGAGGVGSLAIQ 249
Query: 208 LATYYF 213
LA + +
Sbjct: 250 LAKHVY 255
>11_05_0078 -
18906900-18907082,18907104-18907337,18907429-18907653,
18907739-18907909,18907994-18908109,18908215-18908369,
18908450-18908573,18909007-18909107,18909215-18909297,
18909383-18909607,18909694-18909810,18910488-18910640
Length = 628
Score = 31.5 bits (68), Expect = 1.2
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 103 DAIGKAAERTDELKEGARIVLYPYEGVPHGYAEYIVVPDFK 143
D K A+ D+L E + L P G+P+G + I VP++K
Sbjct: 207 DLAYKQAKEADDLLEQGKY-LGPLHGIPYGLKDIIAVPEYK 246
>06_03_0052 -
16027570-16027617,16027789-16027795,16028103-16028341,
16028432-16028566,16028670-16028888
Length = 215
Score = 31.5 bits (68), Expect = 1.2
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 276 GTTSRSLHRSLQCLAPEGVVLVTEDVGERLLSKFAKKAEDLSVSVVVVPNGTIEQLKELV 335
G++SR+ R LQ GV ++ D+G+ L A +A D+ +SVV + EQ+K +
Sbjct: 53 GSSSRA--RLLQSFRDAGVTILQGDIGDHDLLVKAVRAADVVISVVGY-HDVGEQMKIIA 109
Query: 336 SLVARGDIE 344
++ G+I+
Sbjct: 110 AIKEAGNIK 118
>11_06_0759 +
27008772-27009571,27010457-27010576,27011683-27011957,
27012516-27013783
Length = 820
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/64 (25%), Positives = 31/64 (48%)
Query: 195 IVGTGGLALWALRLATYYFKREEYNDRISIAVATLKDEGFLLAKECEEVNVVQWNEDLYE 254
++G GG+ AL Y REE+ + V+ + D +L +++ + ++ L E
Sbjct: 193 MLGIGGIGKTALASKVYRMLREEFQSHAFVTVSKMPDMTRVLFDILDQIGLRKYPASLNE 252
Query: 255 KQLI 258
Q+I
Sbjct: 253 NQVI 256
>01_06_0276 - 28084746-28085003,28085103-28085357,28085531-28085798,
28085948-28086253,28086369-28086643,28087034-28087252,
28087486-28089015,28089236-28089397,28089512-28089666,
28090195-28091064,28091363-28091832,28091917-28091981,
28092105-28092448,28092531-28092710,28092817-28092920,
28093053-28093162,28093648-28093744,28094138-28094238,
28094324-28094476,28094561-28094674,28094795-28094884,
28094960-28095307
Length = 2157
Score = 30.3 bits (65), Expect = 2.7
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 341 GDIEPPPH-SVYPAEEAAEVVRKLCNSEIKGRAILK 375
G I PPPH +Y E+ A+++ L NS + R +K
Sbjct: 1097 GLISPPPHHDIYSIEDLAQLIHDLKNSNPRARISVK 1132
>08_01_0510 + 4455805-4456637,4457837-4457912
Length = 302
Score = 29.5 bits (63), Expect = 4.7
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 186 AKKDKTTVLIVGTGGLALWALRLATYYFKREEYNDRISIAVATLKDEGFLLAKECEEVNV 245
+++D V IVG GGL L + R +++ ++V+ D +L +EVN
Sbjct: 191 SREDLKVVSIVGCGGLGKTTLANQVFKEIRHQFDCSAFVSVSRNPDIKKILRDMLKEVNS 250
Query: 246 VQ----WNEDLYEKQLIERTTD 263
+ W+ + E+QL+ + D
Sbjct: 251 LDNTQPWSPNDDERQLVNKLRD 272
>06_01_0227 - 1733119-1734099
Length = 326
Score = 29.5 bits (63), Expect = 4.7
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 289 LAPEGVVLVTEDVGERLLSKFAKKAEDLSVSVVVVPNGTIEQLKELVSLVARGDIEPPPH 348
LA +G ++ D+ ++S+ ++AE +++ ++++L SL + DI
Sbjct: 167 LASQGASVLASDISAAMVSEAQRQAEAAAMAASDTFRMPRFEVRDLESLEGKYDIVVCLD 226
Query: 349 SV--YPAEEAAEVVRKLCNSEIKGRAILKF 376
+ YP EEA +++R L + K R ++ F
Sbjct: 227 VLIHYPREEAKQMIRHLASLAEK-RVLISF 255
>11_04_0039 +
12679350-12680057,12680136-12680582,12680670-12681556,
12681635-12681805,12681872-12682160,12682390-12682428
Length = 846
Score = 29.1 bits (62), Expect = 6.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 246 VQWNEDLYEKQLIERTTDACGGP 268
+QW +DL E ++I R T A GGP
Sbjct: 463 IQWPKDLIEIRVIARPTTAPGGP 485
>08_02_1050 +
23949828-23949981,23950083-23950534,23951599-23951631,
23952069-23952179,23953175-23953348
Length = 307
Score = 29.1 bits (62), Expect = 6.2
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 215 REEYNDRISIAVATLKDEGFLLAKECEEVNVVQWNEDLYEKQLIE 259
R+ N+ ++++T K L K E V+ EDL EK+L E
Sbjct: 197 RDPINENYLVSLSTEKQTATLAQKNSEATRVLAAQEDLLEKELGE 241
>03_05_0010 +
19622430-19622512,19622539-19623082,19623361-19623767,
19623831-19624167,19624290-19624508,19625522-19625826,
19626128-19626287,19626422-19626547
Length = 726
Score = 29.1 bits (62), Expect = 6.2
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 294 VVLVTEDVGERLLSKFAKKAEDLSVSVVVVPNGTIEQLKELVSLVARGDIEPPPHSV-YP 352
VV +TE +L K +K +D SV ++P ++L V ++ SV YP
Sbjct: 322 VVKLTEQCSNIILHKLPEKKKDPGASVSIMPKDIFDKLNFTVLAPTPMRLQLADSSVRYP 381
Query: 353 AEEAAEVVRKLCN 365
A A +V K+ N
Sbjct: 382 AWIAEDVPVKIQN 394
>01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794
Length = 473
Score = 29.1 bits (62), Expect = 6.2
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 6/102 (5%)
Query: 178 LKVALEGPAKKDKTTVLIVGTGGLALWALRLATYYFKREEYNDRISI--AVATLKDEGFL 235
LK L +KKDKT++LI + +L+ K E R++ A A D+G
Sbjct: 307 LKAVLPPGSKKDKTSILIRAREYVKSLESKLSELEEKNRELEARLASRPAAAAKNDKGET 366
Query: 236 LAKECEEVNVVQWNEDLYEKQLIERTTDACG-GPVDVVLNFG 276
A E +DL E IE TT G G D G
Sbjct: 367 AAAPAPEAGDETKRKDLVE---IEVTTSGGGAGAADAAAAAG 405
>11_01_0788 + 6599962-6602700
Length = 912
Score = 28.7 bits (61), Expect = 8.2
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 165 LLAMNTVVSASECLKVALEG--PAKKDKTTVLIVGTGGLALWALRLATYYFKREEYN-DR 221
LLA + +V K+ E +++ T + + G GGL AL Y ++RE+ N D
Sbjct: 162 LLAQDYLVGIEGNRKLLTEWLYSSEQGNTVITVSGMGGLGKTALVNNVYEYEREKNNFDA 221
Query: 222 ISIAVATLKDEGF-LLAKECEEVNVVQ 247
S V + G LL K ++ VV+
Sbjct: 222 FSWIVVSQTYNGVDLLRKLLRKIGVVE 248
>06_03_0783 -
24546403-24546765,24547202-24547262,24547899-24548004,
24548118-24551600,24553134-24553179
Length = 1352
Score = 28.7 bits (61), Expect = 8.2
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 168 MNTVVSASECLKVALEGPAKKDKTTVLIVGTGGLALWALRLATYYFKREE--YNDRISIA 225
+N ++ ++ K EG + IVGTGG+ L Y KR E Y+ R I
Sbjct: 224 VNRLLEQADIPKSRTEGAISVSPEVITIVGTGGIGKTTLTQLIYNDKRIENNYDMRAWIC 283
Query: 226 VATLKDE 232
V+ + D+
Sbjct: 284 VSHVFDK 290
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.137 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,754,084
Number of Sequences: 37544
Number of extensions: 432699
Number of successful extensions: 1125
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1120
Number of HSP's gapped (non-prelim): 18
length of query: 380
length of database: 14,793,348
effective HSP length: 83
effective length of query: 297
effective length of database: 11,677,196
effective search space: 3468127212
effective search space used: 3468127212
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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