Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002099-TA|BGIBMGA002099-PA|IPR011032|GroES-like,
IPR002085|Alcohol dehydrogenase superfamily, zinc-containing,
IPR013154|Alcohol dehydrogenase GroES-like
(380 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g23740.1 68414.m02996 oxidoreductase, zinc-binding dehydrogen... 36 0.045
At5g63620.1 68418.m07987 oxidoreductase, zinc-binding dehydrogen... 33 0.32
At5g63620.2 68418.m07988 oxidoreductase, zinc-binding dehydrogen... 32 0.55
At3g56460.1 68416.m06279 oxidoreductase, zinc-binding dehydrogen... 31 0.97
At2g43110.1 68415.m05352 expressed protein 31 1.7
At4g15890.1 68417.m02415 expressed protein 30 2.9
At2g21890.1 68415.m02601 mannitol dehydrogenase, putative simila... 29 3.9
At2g21730.1 68415.m02585 mannitol dehydrogenase, putative simila... 29 3.9
At5g07360.1 68418.m00840 amidase family protein low similarity t... 28 9.0
At3g51240.1 68416.m05609 naringenin 3-dioxygenase / flavanone 3-... 28 9.0
At3g15520.1 68416.m01967 peptidyl-prolyl cis-trans isomerase TLP... 28 9.0
At1g80480.1 68414.m09427 PRLI-interacting factor L, putative sim... 28 9.0
At1g16445.1 68414.m01967 methylase-related similar to YtqB (GI:2... 28 9.0
>At1g23740.1 68414.m02996 oxidoreductase, zinc-binding dehydrogenase
family protein contains Pfam profile PF00107:
oxidoreductase, zinc-binding dehydrogenase family
Length = 386
Score = 35.9 bits (79), Expect = 0.045
Identities = 65/241 (26%), Positives = 100/241 (41%), Gaps = 31/241 (12%)
Query: 94 PGYEVAGIIDAIGKAAERTDELKEGARIVLYPYEGVPHG------YAEYIVVPDFKCLVP 147
PGY+VAG++ +G A + +LKEG + E G AEY V + K L
Sbjct: 140 PGYDVAGVVVKVGSAVK---DLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEE-KLLAL 195
Query: 148 IPDQLPLSIAAMLPTGALLAMNTVVSASECLKVALEGPAKKDKTTVLIVGTGGLALWALR 207
P + + AA LP LA+ T A E L V E A K+ +++ G GG+ ++
Sbjct: 196 KPKNIDFAQAAGLP----LAIET---ADEGL-VRTEFSA--GKSILVLNGAGGVGSLVIQ 245
Query: 208 LATYYFKREEYNDRISI-AVATLKDEGFLLAKECEEVNVVQWNEDLYEK-QLIERTTDAC 265
LA + + + S + ++ G LA + + N+ EDL +K ++ C
Sbjct: 246 LAKHVYGASKVAATASTEKLELVRSLGADLAIDYTKENI----EDLPDKYDVVFDAIGMC 301
Query: 266 GGPVDVVLNFGTTSRSLHRSLQCLAPEGVVLVTEDVGERLLSKFAKKAEDLSVSVVVVPN 325
V V+ G + + P G V G+ +L K E V VV P
Sbjct: 302 DKAVKVIKEGG----KVVALTGAVTPPGFRFVVTSNGD-VLKKLNPYIESGKVKPVVDPK 356
Query: 326 G 326
G
Sbjct: 357 G 357
>At5g63620.1 68418.m07987 oxidoreductase, zinc-binding dehydrogenase
family protein contains PFAM zinc-binding dehydrogenase
domain PF00107
Length = 427
Score = 33.1 bits (72), Expect = 0.32
Identities = 56/253 (22%), Positives = 106/253 (41%), Gaps = 35/253 (13%)
Query: 132 GYAEYIVVPDFKCLVPIPDQLPLSIAAMLPTGALLAMNTVVSASECLKVALEGPAKKDKT 191
G AEY V P L P+P+ LP S +A+L A + A+E +
Sbjct: 199 GMAEYCVTPAHG-LAPLPESLPYSESAILGCAVFTAYGAMAHAAEI----------RPGD 247
Query: 192 TVLIVGTGGLALWALRLATYYFKREEYNDRISIAVATLKDEGFLLAKECEEVNVVQWNED 251
++ ++G GG+ L++A + +D I++ V +D+ AK ++V +
Sbjct: 248 SIAVIGIGGVGSSCLQIARAF----GASDIIAVDV---QDDKLQKAKTLGATHIV----N 296
Query: 252 LYEKQLIERTTDACGG-PVDVVLN-FGTTSRSLHRSLQCLAPEGVVLV----TEDVGERL 305
++ +ER + GG VDV + G + +L V++ VGE
Sbjct: 297 AAKEDAVERIREITGGMGVDVAVEALGKPQTFMQCTLSVKDGGKAVMIGLSQAGSVGEID 356
Query: 306 LSKFAKKAEDLSVSVVVVPNGTIEQ-LKELVSLVARG--DIEPPPHSVYPAEEAAEVVRK 362
+++ ++ + V+ G Q L ++V L G ++ S Y E+A + +
Sbjct: 357 INRLVRR----KIKVIGSYGGRARQDLPKVVKLAESGIFNLTNAVSSKYKFEDAGKAFQD 412
Query: 363 LCNSEIKGRAILK 375
L +I R +++
Sbjct: 413 LNEGKIVSRGVVE 425
>At5g63620.2 68418.m07988 oxidoreductase, zinc-binding dehydrogenase
family protein contains PFAM zinc-binding dehydrogenase
domain PF00107
Length = 427
Score = 32.3 bits (70), Expect = 0.55
Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 35/253 (13%)
Query: 132 GYAEYIVVPDFKCLVPIPDQLPLSIAAMLPTGALLAMNTVVSASECLKVALEGPAKKDKT 191
G AEY V P L P+P+ LP S +A+L A + A+E +
Sbjct: 199 GMAEYCVTPAHG-LAPLPESLPYSESAILGCAVFTAYGAMAHAAEI----------RPGD 247
Query: 192 TVLIVGTGGLALWALRLATYYFKREEYNDRISIAVATLKDEGFLLAKECEEVNVVQWNED 251
++ ++G GG+ L++A + +D I++ V +D+ AK ++V +
Sbjct: 248 SIAVIGIGGVGSSCLQIARAF----GASDIIAVDV---QDDKLQKAKTLGATHIV----N 296
Query: 252 LYEKQLIERTTDACGG-PVDVVLN-FGTTSRSLHRSLQCLAPEGVVLV----TEDVGERL 305
++ +ER + GG VDV + G + +L V++ VGE
Sbjct: 297 AAKEDAVERIREITGGMGVDVAVEALGKPQTFMQCTLSVKDGGKAVMIGLSQAGSVGEID 356
Query: 306 LSKFAKKAEDLSVSVVVVPNGTIEQ-LKELVSLVARG--DIEPPPHSVYPAEEAAEVVRK 362
+++ ++ V V+ G Q L ++V L G ++ S Y E+A + +
Sbjct: 357 INRLVRR----KVWVIGSYGGRARQDLPKVVKLAESGIFNLTNAVSSKYKFEDAGKAFQD 412
Query: 363 LCNSEIKGRAILK 375
L +I R +++
Sbjct: 413 LNEGKIVSRGVVE 425
>At3g56460.1 68416.m06279 oxidoreductase, zinc-binding dehydrogenase
family protein low similarity to probable NADP-dependent
oxidoreductase (zeta-crystallin homolog) P1
[SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430],
zeta-crystallin / quinone reductase (NADPH) - Mus
musculus, PIR:A54932; contains Pfam profile PF00107:
oxidoreductase, zinc-binding dehydrogenase family
Length = 348
Score = 31.5 bits (68), Expect = 0.97
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 94 PGYEVAGIIDAIGKAAERTDELKEGARIVLYPYEGVPHGYAEYIVVPDFKCLVPIPDQLP 153
PG + +GI+DAIG A + + G R+ + G +A++IV D L +P++
Sbjct: 72 PGSDYSGIVDAIGPAVTK---FRVGDRVCSFADLG---SFAQFIVA-DQSRLFLVPERCD 124
Query: 154 LSIAAMLP 161
+ AA LP
Sbjct: 125 MVAAAALP 132
>At2g43110.1 68415.m05352 expressed protein
Length = 288
Score = 30.7 bits (66), Expect = 1.7
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 248 WNEDLYEKQLIERTTDACGGPVDVVLNFGTTSRSLHRSLQCLAPEGVVLVTEDV-GERLL 306
W E L E + +ER + G P +V+ S S RSL+ L G+ +T+ +L
Sbjct: 134 WRETLCEGESLERKVEP-GNPSVLVI-----SSSALRSLELL--RGLHSLTKQCPAVKLF 185
Query: 307 SKFAKKAEDLSV--SVVVVPNGTIEQLKELVSLVARG 341
SK K E +S+ V + +GT ++K+LV + A G
Sbjct: 186 SKHLKVEEQVSLLKKRVNIGSGTPNRIKKLVDIEALG 222
>At4g15890.1 68417.m02415 expressed protein
Length = 1314
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 242 EVNVVQWNEDLYEKQLIERTTDACG--GPVDVVL--NFGTTSRSLHRSLQCLAPEGVVLV 297
E ++ + E+++ + ++ER A P L N TTS+ L R ++ L PEGV+++
Sbjct: 512 ETSIQEECENVFHELVLERILRAGNVLSPDSASLPNNRNTTSKDLDRDIEALFPEGVLVL 571
Query: 298 TEDVGERLLSKFAKK 312
++ +S + K
Sbjct: 572 LRELCNSEVSPWVTK 586
>At2g21890.1 68415.m02601 mannitol dehydrogenase, putative similar
to ELI3-2 (SP|Q02972), sinapyl alcohol dehydrogenase
(Populus tremuloides) (gi:14279694); contains Pfam
zinc-binding dehydrogenase domain PF00107
Length = 375
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 80 TIPAHIGIRDGALFPGYEVAGIIDAIGKAAERTDELKEGARI 121
TI H G + PG+E+ GI +GK + KEG R+
Sbjct: 50 TIKNHWGFSRYPIIPGHEIVGIATKVGK---NVTKFKEGDRV 88
>At2g21730.1 68415.m02585 mannitol dehydrogenase, putative similar
to ELI3-2 (SP|Q02972), sinapyl alcohol dehydrogenase
(Populus tremuloides) (gi:14279694); contains Pfam
zinc-binding dehydrogenase domain PF00107
Length = 376
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 80 TIPAHIGIRDGALFPGYEVAGIIDAIGKAAERTDELKEGARI 121
TI H G + PG+E+ GI +GK + KEG R+
Sbjct: 50 TIKNHWGFSRYPIIPGHEIVGIATKVGK---NVTKFKEGDRV 88
>At5g07360.1 68418.m00840 amidase family protein low similarity to
enantiomerase-selective amidase [Rhodococcus sp.]
GI:152052; contains Pfam profile PF01425: Amidase
Length = 659
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 104 AIGKAAERTDELKEGARIVLYPYEGVPHGYAEYIVVPDFK 143
A +A E D L +G L P G+P+G + + VP +K
Sbjct: 248 AYKQAKEADDLLSQGT--YLGPLHGIPYGLKDIVAVPGYK 285
>At3g51240.1 68416.m05609 naringenin 3-dioxygenase / flavanone
3-hydroxylase (F3H) identical to GI:3790548
Length = 358
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 291 PEGVVLVTEDVGERLLSKFAKKAEDLS 317
PEG V VTE+ ERL+S K E LS
Sbjct: 150 PEGWVKVTEEYSERLMSLACKLLEVLS 176
>At3g15520.1 68416.m01967 peptidyl-prolyl cis-trans isomerase TLP38,
chloroplast / thylakoid lumen PPIase of 38 kDa /
cyclophilin / rotamase cyclophylin-type; identical to
SP|P82869 Thylakoid lumenal 38 kDa protein, chloroplast
precursor (P38) {Arabidopsis thaliana}
Length = 466
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 312 KAEDLSVSVVVVPNGTIEQLKELVSLVARGDIEPPPHSVYPA 353
K E +SV + V+P+G E L V G++ P SVY A
Sbjct: 338 KVESVSVPLEVMPSGQFEPLYRTPLSVQDGELPVLPLSVYGA 379
>At1g80480.1 68414.m09427 PRLI-interacting factor L, putative
similar to PRLI-interacting factor L [Arabidopsis
thaliana] GI:11139268; contains Pfam profile PF02492:
Cobalamin synthesis protein/P47K
Length = 444
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 187 KKDKTTVLIVGTGGLALWALRLATYYFKREEYNDRISIAVATLKD 231
KK K +++ T GLA A + T+Y + E +ND V TL D
Sbjct: 172 KKGKFDHIVIETTGLANPAPIIQTFYAEEEIFNDVKLDGVVTLVD 216
>At1g16445.1 68414.m01967 methylase-related similar to YtqB
(GI:2952524) [Streptococcus mutans]
Length = 274
Score = 28.3 bits (60), Expect = 9.0
Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 107 KAAERTDELKEGARIVLYPYEGVPHGYAEYIVVPDFKCLVPIPD 150
KAAER LK G I L Y G P G E VV F +P+ D
Sbjct: 208 KAAERI--LKPGGLISLVVYIGHPGGREELEVVEAFGSGLPVSD 249
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.137 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,466,085
Number of Sequences: 28952
Number of extensions: 336606
Number of successful extensions: 774
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 769
Number of HSP's gapped (non-prelim): 13
length of query: 380
length of database: 12,070,560
effective HSP length: 82
effective length of query: 298
effective length of database: 9,696,496
effective search space: 2889555808
effective search space used: 2889555808
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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