Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002098-TA|BGIBMGA002098-PA|IPR003347|Transcription
factor jumonji/aspartyl beta-hydroxylase, IPR013129|Transcription
factor jumonji
(338 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyce... 137 2e-33
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 106 5e-24
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 79 9e-16
SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces p... 39 9e-04
SPBC4F6.11c |||asparagine synthase |Schizosaccharomyces pombe|ch... 29 0.71
SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual 27 3.8
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 27 5.0
SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|... 26 6.7
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 26 6.7
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 8.8
>SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 715
Score = 137 bits (332), Expect = 2e-33
Identities = 78/242 (32%), Positives = 127/242 (52%), Gaps = 7/242 (2%)
Query: 13 TLENVEKDYWRVVLLGTDHVCVN-SASIDTGNDGYGF---SKNKNDAFGKHPWNLKMLSQ 68
T + VEK+YW++V + V A + T + G F +KN + + K WNL +++
Sbjct: 376 TEDIVEKEYWKLVKDNNTSLEVEYGADLSTLDQGSAFPSLAKNPVNPYSKDTWNLNVIAS 435
Query: 69 NPGNVLRSLGS-VLGVTVPTLHLGMVFSTSCWHRDPHGLPWVEYMHTGPGKIWYGIPNDQ 127
G++L + + V G+T P L++GM FST CWH + + V Y H G K+WYGIP DQ
Sbjct: 436 TNGSLLSYIDNPVSGITCPWLYVGMCFSTFCWHVEDNYTYSVNYQHYGDTKLWYGIPGDQ 495
Query: 128 SDNFRKAVETLCPTSCQNKSIWLPSDIAMIPPSLLREHNVSLSRVVQNPGEFIIVFPKAY 187
++ F +A + P + + L MI P L++ V + + Q P EF+I FPK++
Sbjct: 496 AERFERAALDIAPDLVKKQKDLLYQLATMINPDELQKRGVDVYFIDQGPNEFVITFPKSF 555
Query: 188 SCSIATGFTISESVYFATNSWLETVHHVFQELR--ESCEPTMFSLEHLLVSIAKDSRSSL 245
I GF I+E+V FA WL + L+ +P + S + L+ ++A + S +
Sbjct: 556 HAGINHGFNINEAVNFAPKDWLLNGFSLNGVLKYQSLLKPPVLSHDMLVYNLATNPASEI 615
Query: 246 RI 247
+
Sbjct: 616 SV 617
>SPAC343.11c |msc1||multi-copy suppressor of Chk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1588
Score = 106 bits (254), Expect = 5e-24
Identities = 60/193 (31%), Positives = 94/193 (48%), Gaps = 4/193 (2%)
Query: 48 FSKNKNDAFGKHPWNLKMLSQNPGNVLRSLGSVLGVTVPTLHLGMVFSTSCWHRDPHGLP 107
F ++ +A+ PWNL + + + LR G+ T+ LG + W RD L
Sbjct: 475 FPTSRQNAYYNDPWNLYFIHFSKLSPLRFTPP--GILTSTISLGQPLTCQGWQRDSMSLF 532
Query: 108 WVEYMHTGPGKIWYGIPNDQSDNFRKAVETLCPTSCQNKSIWLPSDIAMIPPSLLREHNV 167
+ Y H G +IWY IP + K + L P+ Q K L ++P S+L + +
Sbjct: 533 GMHYHHYGAQRIWYVIPEVDGPKYEKLLNDLSPSFIQEKPETLIKSKILLPISMLISNGI 592
Query: 168 SLSRVVQNPGEFIIVFPKAYSCSIATGFTISESVYFATNSWLETVH--HVFQELRESCEP 225
+ VQN EF+I P Y + TGF++SESV FAT W++ +H + F +
Sbjct: 593 QVLTFVQNSNEFVITSPNTYYTVLDTGFSLSESVPFATKEWIQDMHAENSFNMYKNLHIS 652
Query: 226 TMFSLEHLLVSIA 238
FSL+H+L++ A
Sbjct: 653 APFSLDHILLANA 665
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 79.0 bits (186), Expect = 9e-16
Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 9/190 (4%)
Query: 54 DAFGKHPWNLKMLS-QNPGNVLRSLGSVLGVTVPTLHLGMVFSTSCWHRDPHGLPWVEYM 112
+ + PWNL L +NP S + +T+ L +GMVF T W + + +
Sbjct: 407 EKYSSEPWNLHNLPFENPCLFNYSFSDLSSLTITRLSIGMVFYTHGWTKSSLSTGLLHHH 466
Query: 113 HTGPGKIWYGIPNDQSDNFRKAVETLCPTSCQ---NKSIWLPSDIAMIPPSLLREHNVSL 169
G WY +P D+SD F + + + P N+S LP ++ PS L E+
Sbjct: 467 RFGDTVTWYVLPPDESDAFERYLISSYPQYTMEDLNRSNGLP---VIVSPSSLIENGFHP 523
Query: 170 SRVVQNPGEFIIVFPKAYSCSIATGFTISESVYFATNSWLE--TVHHVFQELRESCEPTM 227
+ P EF++V P +Y GF+ ESV FAT +W++ ++ L+ P+
Sbjct: 524 IAIDLRPNEFLVVSPNSYHMGFHQGFSSFESVNFATVNWIKDGLLNSSISVLKSMRIPSS 583
Query: 228 FSLEHLLVSI 237
S E +++S+
Sbjct: 584 VSYEAVIISM 593
>SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 752
Score = 39.1 bits (87), Expect = 9e-04
Identities = 39/167 (23%), Positives = 63/167 (37%), Gaps = 4/167 (2%)
Query: 88 LHLGMVFSTSCWHRDPHGLPWVEYMHTGPGKIWYGIPNDQSDNFRKAVETLCPTSCQNKS 147
L G +T W + L V+ G WY IP+ S++F+K L S
Sbjct: 201 LFAGKWKTTLPWRVESPELHAVQVHLGGSSLQWYVIPSAHSESFKKLAGKLAQDEHWRCS 260
Query: 148 IWLPSDIAMIPPSLLREHNVSLSRVVQNPGEFIIVFPKAYSCSIATGFTISESVYFATNS 207
+L + PPS L ++ + V E +I FP + + G + F S
Sbjct: 261 DFLLHQNILFPPSTLVQNGIVTYSTVLKQDELLITFPGTHHSAFCLGDAVLRR--FVFRS 318
Query: 208 WLETVHHVFQELRE-SCEPTMFSLEHLLVSIAKDSRS-SLRILQRVY 252
++ F LR +++S + L K R+ S + L Y
Sbjct: 319 PRSASNYEFSNLRRLMVSESLYSSKSLWPHSHKPQRACSQKFLDEFY 365
>SPBC4F6.11c |||asparagine synthase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 548
Score = 29.5 bits (63), Expect = 0.71
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 43 NDGYGFSKNKNDAFGKHPWNLKMLSQNPGNVLRSLGSVLGVTVPTLHLGMVFSTSCWHRD 102
+D + F+ N+N+ G + L L+ NPG++ + LGS+ G ++ + +T W RD
Sbjct: 89 SDHHKFTLNRNENDGAKLFEL--LNNNPGDIEKILGSIQG-PFAFVYYQVRTNTLWWGRD 145
Query: 103 PHG 105
G
Sbjct: 146 RLG 148
>SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1202
Score = 27.1 bits (57), Expect = 3.8
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 202 YFATNSWLETVHHVFQELRESCEPTMFSLEHLLVSIAKDSRSSLRILQRVYSNLSPIVRD 261
Y+A+N ++ HH F C +F L+ + I L LQ++ + S IVRD
Sbjct: 1026 YWASNRLIDKTHHAFPSSYTWCIMVIFYLQQIPEPI-------LPNLQKLSTQYSKIVRD 1078
Query: 262 ELEYRN 267
+Y N
Sbjct: 1079 N-DYGN 1083
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 221 ESCEPTMFSLEHLLVSIAKDSRSSLRILQRVYSNLSPI 258
+SCE + +L++L+ I + S+LR++ + S L I
Sbjct: 29 QSCEQDLLTLDNLVHHIHNGTTSNLRLISNINSILDHI 66
>SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|chr
2|||Manual
Length = 643
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 54 DAFGKHPWNLKMLSQNPGNVLRSLGSVLGVTVPTLHLGMV 93
DAF K N ++LS N N S V+G ++P+++L +
Sbjct: 495 DAFYKDEINCEVLSWNEQNPKASEERVVGYSLPSVNLQQI 534
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/45 (31%), Positives = 18/45 (40%)
Query: 35 NSASIDTGNDGYGFSKNKNDAFGKHPWNLKMLSQNPGNVLRSLGS 79
N + G FSK F +PW K +S P VL L +
Sbjct: 375 NKPCFNKETKGSIFSKENKGPFTCNPWGAKKVSPPPCEVLADLNT 419
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 25.8 bits (54), Expect = 8.8
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 236 SIAKDSRSSLRILQRV-YSNLSPIVRDELEYRNALLMRG---VKLAEDDVVGITNKRSAV 291
++ +D R +I R + L PI++D+ Y N L G + L D +V + N
Sbjct: 414 ALLQDLRVQKKITLRTKWKELYPIIKDDPRYLNLLGQSGSTPLDLFWDTIVDLENMYREK 473
Query: 292 CILHALRLLESVKYGNKDPSNY-EMVLNFSDK 322
L L LE ++ D SN E++ S+K
Sbjct: 474 RNL-VLDCLEVLQISVDDTSNIPEIIARLSEK 504
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.135 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,726,989
Number of Sequences: 5004
Number of extensions: 74978
Number of successful extensions: 181
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 171
Number of HSP's gapped (non-prelim): 11
length of query: 338
length of database: 2,362,478
effective HSP length: 73
effective length of query: 265
effective length of database: 1,997,186
effective search space: 529254290
effective search space used: 529254290
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)
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