Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002098-TA|BGIBMGA002098-PA|IPR003347|Transcription
factor jumonji/aspartyl beta-hydroxylase, IPR013129|Transcription
factor jumonji
(338 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49644| Best HMM Match : No HMM Matches (HMM E-Value=.) 158 7e-39
SB_39537| Best HMM Match : JmjC (HMM E-Value=0.00017) 69 4e-12
SB_56505| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 4e-11
SB_29649| Best HMM Match : Sushi (HMM E-Value=4.1e-18) 33 0.25
SB_28810| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.76
SB_41658| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_20508| Best HMM Match : Filament (HMM E-Value=0.037) 30 2.3
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 30 3.1
SB_55724| Best HMM Match : SURF6 (HMM E-Value=0.62) 28 9.4
SB_26266| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 9.4
>SB_49644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1615
Score = 158 bits (383), Expect = 7e-39
Identities = 90/278 (32%), Positives = 140/278 (50%), Gaps = 10/278 (3%)
Query: 7 PNGDPPTLENVEKDYWRVVLLGTDHVCVN-SASIDTGNDGYGFSK------NKNDAFGKH 59
P + PT E VEK++WR+V + V V A + + G GF + ++ + +
Sbjct: 399 PPEEVPT-EIVEKEFWRLVCSMDEDVQVEYGADLHSAKHGSGFPRKGETHTSEEEFYANS 457
Query: 60 PWNLKMLSQNPGNVLRSLGS-VLGVTVPTLHLGMVFSTSCWHRDPHGLPWVEYMHTGPGK 118
WNL L+ +VL + + + G+ VP +++GM FS+ CWH + H + YMH G K
Sbjct: 458 AWNLNNLANLEKSVLSHISADISGMKVPWVYVGMCFSSFCWHNEDHWSYSINYMHWGEPK 517
Query: 119 IWYGIPNDQSDNFRKAVETLCPTSCQNKSIWLPSDIAMIPPSLLREHNVSLSRVVQNPGE 178
WYGIP D ++ F A++ P + + L + +I P+ L V + R Q+ GE
Sbjct: 518 TWYGIPGDAAEEFEMAMKEAAPELFEAQPDLLHQLVTIISPNALTAKGVPVVRTNQHAGE 577
Query: 179 FIIVFPKAYSCSIATGFTISESVYFATNSWLETVHHVFQELRESCEPTMFSLEHLLVSIA 238
F+I FP+AY G+ ++E+V FAT+ WL H RE +FS E L+ +A
Sbjct: 578 FVITFPRAYHAGFNQGYNLAEAVNFATSDWLPIGRHCINHYREMTRNPVFSHEELVCKMA 637
Query: 239 KDSRS-SLRILQRVYSNLSPIVRDELEYRNALLMRGVK 275
D L + + VY + IV E + RN LL G +
Sbjct: 638 ADPDGLDLDLAKAVYDEMLAIVETETKRRNTLLENGAQ 675
>SB_39537| Best HMM Match : JmjC (HMM E-Value=0.00017)
Length = 113
Score = 69.3 bits (162), Expect = 4e-12
Identities = 32/88 (36%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Query: 153 DIAMIPPSLLREHNVSLSRVVQNPGEFIIVFPKAYSCSIATGFTISESVYFATNSWLETV 212
D + P +LLRE ++++R+VQ G+F++V PKAY CSI++G++ISESV FA WL +
Sbjct: 28 DSMVSPSNLLRETGLTVTRLVQKQGQFVVVSPKAYHCSISSGYSISESVAFAFPDWLLGM 87
Query: 213 HHVFQELRESCEPTMFSLEHLLVSIAKD 240
++ +++ E P++ +E ++++++++
Sbjct: 88 RNLPKDVLEDW-PSL-PIEQMVIALSEE 113
>SB_56505| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 959
Score = 66.1 bits (154), Expect = 4e-11
Identities = 28/52 (53%), Positives = 41/52 (78%)
Query: 158 PPSLLREHNVSLSRVVQNPGEFIIVFPKAYSCSIATGFTISESVYFATNSWL 209
P +LLRE ++++R+VQ G+F++V PKAY CSI++G++ISESV FA WL
Sbjct: 881 PSNLLRETGLTVTRLVQKQGQFVVVSPKAYHCSISSGYSISESVAFAFPDWL 932
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 12 PTLENVEKDYWRVVLLGTDHVCVNSASIDTGNDGYGFSKNKNDAFGKHPWNLKMLSQNPG 71
P+ +VE++YWR++ +V V +DTG G F KN+ + K WNL + + G
Sbjct: 801 PSAADVEREYWRIIQSRDRYVSVEQCRVDTGEQGSCFPVGKNNPYSKSGWNLNVFPRLKG 860
Query: 72 NVLRSLGSVLG 82
++LR +V G
Sbjct: 861 SILRHAANVEG 871
>SB_29649| Best HMM Match : Sushi (HMM E-Value=4.1e-18)
Length = 214
Score = 33.5 bits (73), Expect = 0.25
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 28 GTDHVCVNSASIDTGNDGYGFSKNKNDAFGKHPWNLKMLSQNPGNVLRSLGSVLGVTVPT 87
G H CVN+ GFS N N ++LK+L P + L S+ S+ V+VP+
Sbjct: 52 GCQHTCVNTHRSFKCLCNRGFSMNSNGRNCDRMYDLKVLKYGPQDTLPSI-SLGQVSVPS 110
Query: 88 LHLGMVFSTSC 98
+G + + +C
Sbjct: 111 QLVGALATYTC 121
>SB_28810| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 523
Score = 31.9 bits (69), Expect = 0.76
Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
Query: 62 NLKMLSQNPGNVLRSLGSVLGVTVPTLHLGMVFSTSCWHRD--------PHGLPWVEYMH 113
+++ +S+ N + + V V L+ ++ + +C+H PH P ++H
Sbjct: 30 DIEAISEVEVNTINEILLYASVAVSLLNFVLLMAYACYHHGVRAPQASAPHAPPNAHHLH 89
Query: 114 TGPGKIWYGIPNDQSDNFRKAVETLCPTSCQN 145
T P WY P + + + R+ +S N
Sbjct: 90 TNPILSWYRHPRNHAASQRRTTRRSMTSSDHN 121
>SB_41658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 448
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 27 LGTDHVCVNSASIDTGNDGYGFSKNKNDAFGKHPWNLKMLSQNPGNVLRSLGSVLGVTVP 86
+G ++ + S +++ G++ N + FG + N+ +QN G+ +++GS +V
Sbjct: 196 IGNTNLDIGSNTLNIGSNTQNIESNTQN-FGSNTQNIGSNTQNIGSNTQNIGSNTQTSVA 254
Query: 87 TLH 89
TLH
Sbjct: 255 TLH 257
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 31.1 bits (67), Expect = 1.3
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
Query: 137 TLCPTSCQNKSIWLPSDIAMIP-PSLLREHNVSLSRVVQNPGEFIIVFPKAYSCSIATGF 195
T+ P S + S+ P +L E V+L + + G F A+ ++A G
Sbjct: 1105 TVLPESTVTPGTTVSSESTATPLTNLASESTVTLETSISSEGTFAPRTTLAHKSTVAPGT 1164
Query: 196 TISESVYFATNSWLETVHHVFQELRESCEPT 226
T+S S + TV E ES E T
Sbjct: 1165 TVSPESTVQPESTIATVSSAAPETTESSEST 1195
>SB_20508| Best HMM Match : Filament (HMM E-Value=0.037)
Length = 722
Score = 30.3 bits (65), Expect = 2.3
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 229 SLEHLLVSIAKDSR----SSLRILQRVYSNLSPIVRDELEYRNALLMRGVKLAEDDVVGI 284
SL+ LL + AK+ S +LQ V + S E R +L + +K A++ + +
Sbjct: 470 SLKTLLETTAKEKETLEVSEKNLLQEVSALKSSFEEKVSELR--VLSKELKTAQETLKNV 527
Query: 285 TNKRSAVCILHALRLLESVKYGNKDPSN 312
+ +R + ++HA R ESV+ + SN
Sbjct: 528 SKERDSYKVVHAYRRKESVQSKTVELSN 555
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 29.9 bits (64), Expect = 3.1
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 206 NSWLETVHHVFQELRESCEPTMFSLEHLLVSIAKDSRSSLRI-LQRVYSNLSPIVRDELE 264
NS + + Q+LRE+ + LE I ++ S+L++ ++ + S L V+++LE
Sbjct: 1047 NSAHQELEQKMQDLRENFSADLSELEQNF-KIIEEENSALKLNVEALESELQLSVKEKLE 1105
Query: 265 YRNALLMRGVKLAEDDVVGITNKRSAVCILHALRL 299
N ++RG L ED +++K+ LH LR+
Sbjct: 1106 --NEHILRG--LREDLQEAMSDKQIKDRALHDLRI 1136
>SB_55724| Best HMM Match : SURF6 (HMM E-Value=0.62)
Length = 1105
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 13 TLENVEKDYWRVVLLGTD--HVCVNSASIDTG---NDGYGFSKNKNDAFGKH 59
T ++ +K++ + LLG D H+ VN ++ D G + GYG + K+ + H
Sbjct: 750 TAQHTKKNFTKKALLGVDHIHIAVNQSNKDLGKVSSSGYGPTLPKSASVRTH 801
>SB_26266| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1038
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 6 PPNGDPPTLENVEKDYWRV 24
PP G PPT+ + KD W +
Sbjct: 804 PPMGTPPTIYQIMKDCWNI 822
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.135 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,393,665
Number of Sequences: 59808
Number of extensions: 534660
Number of successful extensions: 1094
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1085
Number of HSP's gapped (non-prelim): 13
length of query: 338
length of database: 16,821,457
effective HSP length: 83
effective length of query: 255
effective length of database: 11,857,393
effective search space: 3023635215
effective search space used: 3023635215
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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