GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002098-TA|BGIBMGA002098-PA|IPR003347|Transcription
factor jumonji/aspartyl beta-hydroxylase, IPR013129|Transcription
factor jumonji
         (338 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    25   3.0  
DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.        25   4.0  
AF203339-1|AAF19834.1|  156|Anopheles gambiae immune-responsive ...    25   4.0  
AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive ...    24   5.3  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   7.0  
AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...    23   9.2  
AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione S-tran...    23   9.2  

>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 8/96 (8%)

Query: 67  SQNPGNVLRSLGSVLG---VTVPTLHLGMVFSTSCWHRDPHGLPWVEYMHTGPGKIWYGI 123
           ++N    L  +G  +G   +T+P  H+G      C+    H  P    M+T  G    G+
Sbjct: 139 TENGSPPLDQMGHHMGTAQMTIPQHHMGHSQGQECYPEQVHQTPQHMAMYTNAGGGPPGV 198

Query: 124 PNDQSDNFRKAVETL-----CPTSCQNKSIWLPSDI 154
              Q +   +    L      P + QN S  L S +
Sbjct: 199 TQQQPNMMHQQPPPLHQGQQAPPNSQNASSGLQSPL 234


>DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.
          Length = 409

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 279 DDVVGITNKRSAVCILHALRLLESVKYGN 307
           DD + + NK   +   H   +LE V Y N
Sbjct: 127 DDFIEVINKYQQIANTHYHAMLEKVSYSN 155


>AF203339-1|AAF19834.1|  156|Anopheles gambiae immune-responsive
           serpin-related proteinISerpF1 protein.
          Length = 156

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 279 DDVVGITNKRSAVCILHALRLLESVKYGN 307
           DD + + NK   +   H   +LE V Y N
Sbjct: 28  DDFIEVINKYQQIANTHYHAMLEKVSYSN 56


>AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR20 protein.
          Length = 175

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query: 86  PTLHLGMVFSTSCWHRDPHGL 106
           P +H+       C HR+PHG+
Sbjct: 104 PPVHIPPYEIEGCGHRNPHGM 124


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 217 QELRESCEPTMFSLEHLLVSIAKDSRSSLRILQ 249
           Q++    +P M S+E  + +I   + + LRILQ
Sbjct: 388 QKIDTELKPEMMSIERSIETIENVASNKLRILQ 420


>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query: 113 HTGPGKIWYGIPNDQ 127
           H  P K+ +G PNDQ
Sbjct: 82  HYNPDKVSHGAPNDQ 96


>AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione
           S-transferase D6 protein.
          Length = 222

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 239 KDSRSSLRILQRVYSNLSPIVRDELEYRNALLMRGVKLAED 279
           KD     ++ QR++ ++  ++R    Y + +LM G    ED
Sbjct: 92  KDIALRAKVNQRLFYDIGTLMRSVTTYYHPILMGGEGKLED 132


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.135    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 378,057
Number of Sequences: 2123
Number of extensions: 16091
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 21
Number of HSP's gapped (non-prelim): 7
length of query: 338
length of database: 516,269
effective HSP length: 64
effective length of query: 274
effective length of database: 380,397
effective search space: 104228778
effective search space used: 104228778
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)