Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002097-TA|BGIBMGA002097-PA|IPR003349|Transcription
factor jumonji, JmjN, IPR001606|AT-rich interaction region,
IPR012337|Polynucleotidyl transferase, Ribonuclease H fold,
IPR013103|Reverse transcriptase, RNA-dependent DNA polymerase
(2576 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 30 0.24
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 28 0.72
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 26 2.9
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 25 5.1
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 25 5.1
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 25 5.1
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 25 5.1
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 25 5.1
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 25 5.1
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 25 6.7
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 25 6.7
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 25 8.9
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthologue
protein.
Length = 431
Score = 29.9 bits (64), Expect = 0.24
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 1533 GESTSNNSR-GRFFLNGETMSSSSCGYTREYGEAISNTCRSYMSVNGEPIPS-TSRSHIG 1590
G S N+ G +NG M+SSS GYT G ISN R M+ P+ + S +G
Sbjct: 50 GSSMLNSGMPGGMAMNGNGMTSSSMGYT-TIGSPISNRIRHEMAT---PMATMNSYGSVG 105
Query: 1591 TKG 1593
T G
Sbjct: 106 TLG 108
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 protein.
Length = 533
Score = 28.3 bits (60), Expect = 0.72
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 2263 RTPSTSCAHGGEDCVSTPSTSRHQSDEDTETVPSTVVIQTDE 2304
R PST A G + +TP + ++ T T T + T E
Sbjct: 414 RPPSTPSADGSKPVQTTPKPGQWVPEKSTSTTQRTTTVSTTE 455
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
protein.
Length = 1156
Score = 26.2 bits (55), Expect = 2.9
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 2201 NTELTSSVTRDC--SGDLKKSNRNSLR--VVRGEIGAPTSNTRDQSDSNKKS 2248
+T L R C G + + RN L+ ++ I P S TRD+S N+KS
Sbjct: 645 DTSLFVDHIRQCVGGGTIGSNQRNFLKNALMSNNILPPESPTRDKSKQNEKS 696
Score = 25.8 bits (54), Expect = 3.9
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 506 EHTSNFHTCARCS-IYKRLNSFSSKLKTEVESICIIEDDVYEFDVVNEEPTQVVEPYNSK 564
E N C C + L + ++ +K + + ++N +P Q+ P N+
Sbjct: 372 EQAKNVLKCVWCKQSFPSLAAMTTHMKEAKHCGVNVPVPPMQSQIINPQP-QITSPSNTN 430
Query: 565 QNRSSTSSAIDTNSLGSVTISET 587
+ SST+S +S ++ I ET
Sbjct: 431 TSTSSTNSNKPNSSDLNMLIKET 453
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 25.4 bits (53), Expect = 5.1
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
Query: 2179 NREPNGENAKRKQICYHNESTDNTELTSSVTRDCSGDLKKSNRNSLRVVRGEIGAPTSNT 2238
N+ PN +N +RK T T R + + +N N R RGE+ N
Sbjct: 292 NKLPNTKNVRRK-----TNPAGVTTTTKGKVRAKTQNATPANNNDKRKSRGEVDGLGENM 346
Query: 2239 RDQS 2242
D S
Sbjct: 347 MDMS 350
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 25.4 bits (53), Expect = 5.1
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 1577 NGEPIPSTSRSHIGTKGETLSSTFRDNIGINREPL 1611
NG+P+ +H+G L S ++G+ R P+
Sbjct: 130 NGDPLSQPPPAHMGIPPYQLDSKTAGSMGLTRPPM 164
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 25.4 bits (53), Expect = 5.1
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 1577 NGEPIPSTSRSHIGTKGETLSSTFRDNIGINREPL 1611
NG+P+ +H+G L S ++G+ R P+
Sbjct: 22 NGDPLSQPPPAHMGIPPYQLDSKTAGSMGLTRPPM 56
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 25.4 bits (53), Expect = 5.1
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 2235 TSNTRDQSDSNKKSDRRFSGDQSGENIVRTPSTSCAHGG--EDCVSTPST 2282
T +T + +D D + VR PS+S ++GG D V +P T
Sbjct: 45 TGSTNGDGGARSNADSTSHTDGASTPDVRPPSSSLSYGGPVNDDVRSPGT 94
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 25.4 bits (53), Expect = 5.1
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 2235 TSNTRDQSDSNKKSDRRFSGDQSGENIVRTPSTSCAHGG--EDCVSTPST 2282
T +T + +D D + VR PS+S ++GG D V +P T
Sbjct: 201 TGSTNGDGGARSNADSTSHTDGASTPDVRPPSSSLSYGGPVNDDVRSPGT 250
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 25.4 bits (53), Expect = 5.1
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
Query: 2179 NREPNGENAKRKQICYHNESTDNTELTSSVTRDCSGDLKKSNRNSLRVVRGEIGAPTSNT 2238
N+ PN +N +RK T T R + + +N N R RGE+ N
Sbjct: 292 NKLPNTKNVRRK-----TNPAGVTTTTKGKVRAKTQNATPANNNDKRKSRGEVDGLGENM 346
Query: 2239 RDQS 2242
D S
Sbjct: 347 MDMS 350
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 25.0 bits (52), Expect = 6.7
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 2015 CDKSYENTESTTSLTNDRSGEKTVPMP---SNYKQNAESRSHVPSTSCD---QCRENRKS 2068
C+KS+ + T+ SGEK P + Q++ +H+ + S + +CR +K+
Sbjct: 27 CNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRLCKKA 86
Query: 2069 KRSSS 2073
SS
Sbjct: 87 FSDSS 91
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 25.0 bits (52), Expect = 6.7
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 2015 CDKSYENTESTTSLTNDRSGEKTVPMP---SNYKQNAESRSHVPSTSCD---QCRENRKS 2068
C+KS+ + T+ SGEK P + Q++ +H+ + S + +CR +K+
Sbjct: 283 CNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRLCKKA 342
Query: 2069 KRSSS 2073
SS
Sbjct: 343 FSDSS 347
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 24.6 bits (51), Expect = 8.9
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 176 SSVVNTSARSLLDIVSFNNVHSHDQPIVLLERLSSPVIPSTSKPVVKEKSVET 228
+SV N + D++ +H D I LER + + S + +K + T
Sbjct: 102 NSVRNVQQHTFADLIQLEQIHLDDNRIESLERRAFMNLKSLKRLNLKGNKIAT 154
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.311 0.126 0.359
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,345
Number of Sequences: 317
Number of extensions: 24545
Number of successful extensions: 81
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 66
Number of HSP's gapped (non-prelim): 22
length of query: 2576
length of database: 114,650
effective HSP length: 69
effective length of query: 2507
effective length of database: 92,777
effective search space: 232591939
effective search space used: 232591939
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 51 (24.6 bits)
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