GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002096-TA|BGIBMGA002096-PA|IPR000387|Tyrosine specific
protein phosphatase and dual specificity protein phosphatase,
IPR000242|Tyrosine specific protein phosphatase, IPR003595|Protein
tyrosine phosphatase, catalytic region, IPR012265|Protein-tyrosine
phosphatase, non-receptor 1/2
         (369 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   1.8  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   7.3  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   7.3  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 1/27 (3%)

Query: 243 SLCRP-PARPLPAIPSSMSLGDHLSAP 268
           S C P P R LP  PSS    D +S P
Sbjct: 222 SFCIPLPVRVLPNFPSSGHWQDQMSLP 248


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 208 REDPNYVPSNMVESVYSPVTDVEDDC 233
           +E   Y P    E +++P T++ +DC
Sbjct: 101 QERYEYFPGFPGEEMWNPNTNISEDC 126


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 208 REDPNYVPSNMVESVYSPVTDVEDDC 233
           +E   Y P    E +++P T++ +DC
Sbjct: 101 QERYEYFPGFPGEEMWNPNTNISEDC 126


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.133    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,830
Number of Sequences: 429
Number of extensions: 3636
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 5
length of query: 369
length of database: 140,377
effective HSP length: 59
effective length of query: 310
effective length of database: 115,066
effective search space: 35670460
effective search space used: 35670460
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)