Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002095-TA|BGIBMGA002095-PA|IPR000242|Tyrosine specific
protein phosphatase, IPR012265|Protein-tyrosine phosphatase,
non-receptor 1/2
(98 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyce... 36 0.001
SPAC11E3.09 |pyp3||protein-tyrosine phosphatase Pyp3|Schizosacch... 31 0.025
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 31 0.033
SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyc... 27 0.40
SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6 |Schizosaccharo... 24 3.7
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 24 5.0
SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces pombe... 24 5.0
SPBPB8B6.03 ||SPAPB8B6.03, SPAPB8B6.03|acetamidase |Schizosaccha... 24 5.0
SPAC11E3.11c |||guanyl-nucleotide exchange factor |Schizosacchar... 23 8.7
SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor Thi1|Sc... 23 8.7
SPBC4F6.11c |||asparagine synthase |Schizosaccharomyces pombe|ch... 23 8.7
>SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 550
Score = 35.9 bits (79), Expect = 0.001
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 51 NRYRDVNPYDHSRIVLQR---SENDYINANLVRLE 82
NRY D+ PY+ +R+ L+R SE DYINA+ ++ E
Sbjct: 299 NRYTDIVPYNCTRVHLKRTSPSELDYINASFIKTE 333
>SPAC11E3.09 |pyp3||protein-tyrosine phosphatase
Pyp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 303
Score = 31.5 bits (68), Expect = 0.025
Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 49 ALNRYRDVNPYDHSRIVLQ---RSENDYINANLVRL 81
A NRY ++ PY+++R+ L + DYINA++V++
Sbjct: 51 ARNRYSNIVPYENTRVRLDPMWKEACDYINASIVKI 86
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 31.1 bits (67), Expect = 0.033
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 34 KLPYTCVEAKRPHN-KALNRYRDVNPYDHSRI--VLQRSENDYINAN 77
K + C+ + R + NRY D+ PYD +R+ + + +DYINA+
Sbjct: 444 KSDWCCLASSRSTSISRKNRYTDIVPYDKTRVRLAVPKGCSDYINAS 490
>SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1428
Score = 27.5 bits (58), Expect = 0.40
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Query: 45 PHNKALNRYRDV-----NPYDHSRIVLQRSENDYINANLVRLELYEPKGGLISGTT 95
PHN A R D + ++ +Q +END +NAN L L K G TT
Sbjct: 405 PHNDAETRADDDAYLMGDLFNQEEEDIQDTENDLLNANYTLLPLTTDKSGTRPSTT 460
>SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 24.2 bits (50), Expect = 3.7
Identities = 14/62 (22%), Positives = 27/62 (43%)
Query: 22 PLIYQRVGQECQKLPYTCVEAKRPHNKALNRYRDVNPYDHSRIVLQRSENDYINANLVRL 81
P++ + +G QK + + K P N R D+ P + S V ++ + N +L
Sbjct: 644 PIVIRDLGLNKQKRDSSKLNHKEPSNPIEERNEDIEPSEASTSVSKKRKQKKKKKNSGKL 703
Query: 82 EL 83
+
Sbjct: 704 TI 705
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 23.8 bits (49), Expect = 5.0
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 66 LQRSENDYINANLVRLELY 84
L E+DY+ A+LVRL ++
Sbjct: 522 LDYEESDYVPADLVRLSIF 540
>SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 659
Score = 23.8 bits (49), Expect = 5.0
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 42 AKRPHNKALNRYRDVNPYDHSRIVLQRSENDYINANLVRL 81
++ P N R NP + SR R E D AN R+
Sbjct: 575 SRLPENLPTTRSSSNNPIEASRPPFSRDEQDISKANDFRV 614
>SPBPB8B6.03 ||SPAPB8B6.03, SPAPB8B6.03|acetamidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 23.8 bits (49), Expect = 5.0
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 56 VNPYDHSRIVLQRSENDYINANLVRLELYEPKGGLIS 92
VN Y++ ++L EN N +++ L KG S
Sbjct: 40 VNTYEYLNLILPPEENAITNLSMLELATNIAKGNYTS 76
>SPAC11E3.11c |||guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 23.0 bits (47), Expect = 8.7
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 70 ENDYINANLVRLELY 84
++DY+ NLVRL +Y
Sbjct: 914 KSDYLQLNLVRLRVY 928
>SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor
Thi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 23.0 bits (47), Expect = 8.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 32 CQKLPYTCVEAKRPHNKALNR 52
C+ L CV A++ NK L+R
Sbjct: 58 CKTLNIECVYAQKSQNKTLSR 78
>SPBC4F6.11c |||asparagine synthase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 548
Score = 23.0 bits (47), Expect = 8.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 56 VNPYDHSRIVLQRSEND 72
+N DH + L R+END
Sbjct: 86 INHSDHHKFTLNRNEND 102
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.137 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,269
Number of Sequences: 5004
Number of extensions: 19387
Number of successful extensions: 55
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43
Number of HSP's gapped (non-prelim): 11
length of query: 98
length of database: 2,362,478
effective HSP length: 62
effective length of query: 36
effective length of database: 2,052,230
effective search space: 73880280
effective search space used: 73880280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)
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