Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002095-TA|BGIBMGA002095-PA|IPR000242|Tyrosine specific
protein phosphatase, IPR012265|Protein-tyrosine phosphatase,
non-receptor 1/2
(98 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28559| Best HMM Match : Y_phosphatase (HMM E-Value=0) 50 2e-07
SB_25091| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 4e-07
SB_25969| Best HMM Match : fn3 (HMM E-Value=3.1e-13) 46 4e-06
SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 5e-06
SB_28862| Best HMM Match : Y_phosphatase (HMM E-Value=4e-05) 46 7e-06
SB_21229| Best HMM Match : Y_phosphatase (HMM E-Value=0) 46 7e-06
SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 7e-06
SB_15683| Best HMM Match : Y_phosphatase (HMM E-Value=0) 45 1e-05
SB_37561| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 1e-05
SB_43390| Best HMM Match : fn3 (HMM E-Value=9.3e-30) 44 2e-05
SB_99| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 5e-05
SB_47814| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 8e-05
SB_503| Best HMM Match : Y_phosphatase (HMM E-Value=0) 41 1e-04
SB_22355| Best HMM Match : Y_phosphatase (HMM E-Value=0) 40 2e-04
SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 2e-04
SB_30310| Best HMM Match : Y_phosphatase (HMM E-Value=0) 40 3e-04
SB_20521| Best HMM Match : Y_phosphatase (HMM E-Value=0) 40 4e-04
SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 4e-04
SB_16698| Best HMM Match : Y_phosphatase (HMM E-Value=0) 39 7e-04
SB_25421| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.002
SB_47501| Best HMM Match : Y_phosphatase (HMM E-Value=9e-12) 35 0.012
SB_9051| Best HMM Match : Y_phosphatase (HMM E-Value=0) 30 0.35
SB_37363| Best HMM Match : TPR_2 (HMM E-Value=0) 29 0.80
SB_5420| Best HMM Match : Plasmodium_HRP (HMM E-Value=3.7) 27 2.4
SB_48704| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.2
SB_2494| Best HMM Match : M (HMM E-Value=0.0056) 27 3.2
SB_36989| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.3
SB_18446| Best HMM Match : Kelch_1 (HMM E-Value=0) 26 4.3
SB_31260| Best HMM Match : rve (HMM E-Value=5.2e-25) 26 4.3
SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_44421| Best HMM Match : F5_F8_type_C (HMM E-Value=1.1e-29) 26 5.6
SB_42815| Best HMM Match : rve (HMM E-Value=0.00022) 25 7.5
SB_31766| Best HMM Match : RVT_1 (HMM E-Value=9.1e-09) 25 7.5
SB_51718| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.9
SB_48208| Best HMM Match : rve (HMM E-Value=2e-20) 25 9.9
SB_10449| Best HMM Match : Ribosomal_L22 (HMM E-Value=7.8) 25 9.9
SB_7873| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.9
>SB_28559| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 893
Score = 50.4 bits (115), Expect = 2e-07
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Query: 41 EAKRPHNKALNRYRDVNPYDHSRIVLQRSENDYINANLVRLELYEPKGGLI 91
+A++P N NRYRD+ PYD +R+ L + +DYINAN V +E+ P G++
Sbjct: 420 DARKPENLPKNRYRDILPYDETRVKLFKG-SDYINANFVNMEV--PSHGIV 467
>SB_25091| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 49.6 bits (113), Expect = 4e-07
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 33 QKLPYTCVEAKRPHNKALNRYRDVNPYDHSRIVLQR----SENDYINANLVRLELYEPKG 88
Q+ P+ A++P NK NRY ++ YDHSR+VL+R ++DYINA+ + + + G
Sbjct: 106 QQFPWEA--ARKPANKNKNRYANIVAYDHSRVVLERVNGDEDSDYINASFIHVSTHAHNG 163
Query: 89 GLISGT 94
SGT
Sbjct: 164 VGRSGT 169
>SB_25969| Best HMM Match : fn3 (HMM E-Value=3.1e-13)
Length = 469
Score = 46.4 bits (105), Expect = 4e-06
Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 37 YTCVEAKRPHNKALNRYRDVNPYDHSRIVLQRSEN--DYINANLVRL 81
+T AK HN+A +RY ++ PYDHSR++L+ + + DYINA +++
Sbjct: 422 FTSHAAKLSHNRAKSRYGNIQPYDHSRVMLRGAGSGCDYINATYIKV 468
>SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1894
Score = 46.0 bits (104), Expect = 5e-06
Identities = 18/35 (51%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Query: 47 NKALNRYRDVNPYDHSRIVLQRSEN-DYINANLVR 80
N NRYRD++P+DH+R++L EN DYINA+ ++
Sbjct: 1142 NNTKNRYRDIHPWDHTRVLLTTKENGDYINASYIK 1176
>SB_28862| Best HMM Match : Y_phosphatase (HMM E-Value=4e-05)
Length = 146
Score = 45.6 bits (103), Expect = 7e-06
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 6/51 (11%)
Query: 33 QKLPYTCVEAKRPHNKALNRYRDVNPYDHSRIVLQR----SENDYINANLV 79
Q+ P+ A++P NK NRY ++ YDHSR+VL+R ++DYINA+ +
Sbjct: 51 QQFPWEA--ARKPANKNKNRYANIVAYDHSRVVLERVNGDEDSDYINASFI 99
>SB_21229| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 629
Score = 45.6 bits (103), Expect = 7e-06
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 6/51 (11%)
Query: 33 QKLPYTCVEAKRPHNKALNRYRDVNPYDHSRIVLQR----SENDYINANLV 79
Q+ P+ A++P NK NRY ++ YDHSR+VL+R ++DYINA+ +
Sbjct: 234 QQFPWEA--ARKPANKNKNRYANIVAYDHSRVVLERVNGDEDSDYINASFI 282
Score = 26.2 bits (55), Expect = 4.3
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 43 KRPHNKALNRYRDVNPYDHSRIVLQR----SENDYINA 76
+ P N NR+ D+ + R++L + E+DYINA
Sbjct: 543 EEPQNLHKNRFSDIIALNSCRVMLHKEHADEESDYINA 580
>SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1938
Score = 45.6 bits (103), Expect = 7e-06
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 6/51 (11%)
Query: 33 QKLPYTCVEAKRPHNKALNRYRDVNPYDHSRIVLQR----SENDYINANLV 79
Q+ P+ A++P NK NRY ++ YDHSR+VL+R ++DYINA+ +
Sbjct: 1411 QQFPWEA--ARKPANKNKNRYANIVAYDHSRVVLERVNGDEDSDYINASFI 1459
>SB_15683| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 753
Score = 44.8 bits (101), Expect = 1e-05
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Query: 42 AKRPHNKALNRYRDVNPYDHSRIVLQRSEN----DYINANLVR 80
AK+ NKA NRY ++ YDHSR+VL++ N DYINA+ +R
Sbjct: 524 AKKRVNKAKNRYANIVTYDHSRVVLEKLSNDPHSDYINASYLR 566
>SB_37561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1209
Score = 44.8 bits (101), Expect = 1e-05
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Query: 42 AKRPHNKALNRYRDVNPYDHSRIVLQRSEN----DYINANLVR 80
AK+ NKA NRY ++ YDHSR+VL++ N DYINA+ +R
Sbjct: 1153 AKKRVNKAKNRYANIVTYDHSRVVLEKLSNDPHSDYINASYLR 1195
>SB_43390| Best HMM Match : fn3 (HMM E-Value=9.3e-30)
Length = 1043
Score = 44.4 bits (100), Expect = 2e-05
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 37 YTCVEAKRPHNKALNRYRDVNPYDHSRIVLQRSEN--DYINANLVR 80
+T AK HN+A NRY ++ YDHSR++L+ + + DYINA ++
Sbjct: 911 FTSHAAKLSHNRAKNRYVNIQAYDHSRVMLRGAGSGCDYINATYIK 956
>SB_99| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 965
Score = 42.7 bits (96), Expect = 5e-05
Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 37 YTCVEAKRPHNKALNRYRDVNPYDHSRIVLQRSEN--DYINANLVRL 81
+T AK HN+A NRY ++ Y+HSR++L+ + + DYINA +++
Sbjct: 694 FTSHAAKLTHNRAKNRYWNIQAYNHSRVMLRGAGSGCDYINATYIKV 740
>SB_47814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1492
Score = 41.9 bits (94), Expect = 8e-05
Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 4/42 (9%)
Query: 42 AKRPHNKALNRYRDVNPYDHSRIVLQR----SENDYINANLV 79
A++ NK NRY ++ YDHSR+VL+R ++DYINA+ +
Sbjct: 902 ARKAANKKKNRYGNIVTYDHSRVVLERVNGDEDSDYINASFI 943
>SB_503| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 979
Score = 41.1 bits (92), Expect = 1e-04
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 33 QKLPYTCVEAKRPHNKALNRYRDVNPYDHSRIVLQR----SENDYINANLV 79
Q+ P+ NK NRY ++ YDHSR+VL+R + DYINA+ +
Sbjct: 391 QQFPWGAARKPANKNKNKNRYANIVAYDHSRVVLERVNGDEDLDYINASFI 441
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 20 GWPLIYQRVGQ-ECQKLPYTCVEA-KRPHNKALNRYRDVNPYDHSRIVLQR----SENDY 73
G+ L +QR+ +++P ++P N NR+ D+ + R++L + E+DY
Sbjct: 668 GYALEFQRLNSVTSREIPVEEKSVGEKPQNLHKNRFSDIIALNSCRVMLHKEHADEESDY 727
Query: 74 INA 76
INA
Sbjct: 728 INA 730
Score = 26.2 bits (55), Expect = 4.3
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 43 KRPHNKALNRYRDVNPYDHSRIVLQR----SENDYINA 76
+ P N NR+ D+ + R++L++ E+DYINA
Sbjct: 753 EEPQNLQKNRFCDIVALNSCRVMLRKEHADEESDYINA 790
>SB_22355| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 1252
Score = 40.3 bits (90), Expect = 2e-04
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 37 YTCVEAKRPHNKALNRYRDVNPYDHSRIVLQR----SENDYINANLV--RLELYEPKGG 89
+T + P NK NRY ++ YDHSR++L E+DYINAN + + + Y P G
Sbjct: 749 FTWHHSLHPANKYKNRYANIVAYDHSRVLLTPLEGVLESDYINANYIDRKCDQYWPDRG 807
>SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4232
Score = 40.3 bits (90), Expect = 2e-04
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 11 EYLDIMHRNGWPLIYQRVGQECQKLPYTCVEAKRPHNKALNRYRDVNPYDHSRIVLQRSE 70
E++ +H NG L Q G T + N+ NRY ++ +DH R++LQ E
Sbjct: 3097 EHVRRLHANGELLFSQEYGAFRSPDTVTSHHSLNQANRFKNRYNNITAFDHCRVLLQPIE 3156
Query: 71 ----NDYINAN 77
+DYINAN
Sbjct: 3157 GDPTSDYINAN 3167
Score = 35.5 bits (78), Expect = 0.007
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 25 YQRVGQECQKLPYTCVEAKRPHNKALNRYRDVNPYDHSRIVLQRSE----NDYINANLV 79
+QR+ + + P A P NK NRY +V PYD +R+ L +DYINAN +
Sbjct: 3402 FQRLSRN-KAPPSKFQSANLPVNKHKNRYANVLPYDDTRVRLTMQAVTEGSDYINANYI 3459
>SB_30310| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 990
Score = 39.9 bits (89), Expect = 3e-04
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 43 KRPHNKALNRYRDVNPYDHSRIVLQRSEN----DYINANLV 79
K+ N NRY DV PYDH+R+ L+ + N DYINA+ +
Sbjct: 410 KQDKNVRKNRYSDVLPYDHNRVSLRETANATGSDYINASFI 450
>SB_20521| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 834
Score = 39.5 bits (88), Expect = 4e-04
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 39 CVEAKRPHNKALNRYRDVNPYDHSRIVLQRSE-NDYINANLVRL 81
C K N NRYR+V PY+ +R+ L S DYINAN +R+
Sbjct: 58 CDSGKNQANTDKNRYRNVLPYEATRVRLSGSSGEDYINANHIRV 101
>SB_15888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2437
Score = 39.5 bits (88), Expect = 4e-04
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 39 CVEAKRPHNKALNRYRDVNPYDHSRIVLQRSE-NDYINANLVRL 81
C K N NRYR+V PY+ +R+ L S DYINAN +R+
Sbjct: 2303 CDSGKNQANTDKNRYRNVLPYEATRVRLSGSSGEDYINANHIRV 2346
>SB_16698| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 839
Score = 38.7 bits (86), Expect = 7e-04
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 10 AEYLDIMHRNGWPLIYQRVGQECQKLP--YTCVEAKRPHNKALNRYRDVNPYDHSRIVLQ 67
AEY I H G + C + P ++ + + NK NRY+++ YDH+R+ +
Sbjct: 152 AEYCQIHHSTGNKSFKEEF--MCIRTPGNFSWDHSLKEENKPKNRYQNIVAYDHTRVAIS 209
Query: 68 RSE----NDYINANLV 79
+ +DYINAN +
Sbjct: 210 ELDGIPGSDYINANFI 225
>SB_25421| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 37.5 bits (83), Expect = 0.002
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 38 TCVEAKRPHNKALNRYRDVNPYDHSRIVLQRSE----NDYINANLV 79
T + P N+ NRY ++ YDHSR+ LQ E +DYINAN +
Sbjct: 359 TATHSLDPVNQHKNRYINIVAYDHSRVKLQDFEDEPGSDYINANFL 404
>SB_47501| Best HMM Match : Y_phosphatase (HMM E-Value=9e-12)
Length = 274
Score = 34.7 bits (76), Expect = 0.012
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 35 LPYTC-VEAKRPHNKALNRYRDVNPYDHSRIVLQRSENDYINA--NLVRLELYEPKGGLI 91
LP C + A P NK NRY D+ D SR+VL +++ I N V + Y+ + I
Sbjct: 105 LPKACYIVASYPENKDKNRYSDILASDFSRVVLTAIDDNEITTYINAVHISGYKQQHAFI 164
Query: 92 SGTTDLT 98
LT
Sbjct: 165 VTQYPLT 171
>SB_9051| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 1831
Score = 29.9 bits (64), Expect = 0.35
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
Query: 51 NRYRDVNPYDHSRIVLQRSEN-----DYINAN 77
NRY ++ YDHSR++L+ DYINA+
Sbjct: 1070 NRYANIIAYDHSRVILEPDSAGDKICDYINAS 1101
>SB_37363| Best HMM Match : TPR_2 (HMM E-Value=0)
Length = 936
Score = 28.7 bits (61), Expect = 0.80
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 9 EAEYLDIMHRNGWPL-IYQRVGQECQKLPYTCVEAKRPHNKALNRYRD-VNPYDHSRIVL 66
+ +Y D M+ L ++Q+ G EC KL +T V +Y D VN Y H+ +
Sbjct: 470 QGKYEDAMNNYQHALSLFQKTGDECVKLRHTMVWV--ICTSLRGKYEDAVNNYQHALSLF 527
Query: 67 QRSENDYINANLVR 80
Q++ + N R
Sbjct: 528 QKAGDQEGQVNTYR 541
>SB_5420| Best HMM Match : Plasmodium_HRP (HMM E-Value=3.7)
Length = 217
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 25 YQRVGQECQKLPYTCVE--AKRPHNKALNRYRDVNPYDHSRIVLQRSENDYIN 75
Y + + ++ PY + A+R +N+Y ++ PY H +R+ +IN
Sbjct: 67 YCHINKYAERAPYCHINKYAERAPYCHINKYAEIAPYCHINKYAERAPYSHIN 119
Score = 25.4 bits (53), Expect = 7.5
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 24 IYQRVGQECQKLPYTCVE--AKRPHNKALNRYRDVNPYDHSRIVLQRSENDYIN 75
+Y + + ++ PY + A+R +N+Y + PY H +R+ +IN
Sbjct: 6 LYCHINKYAERAPYCHINKYAERAPYCHINKYAERAPYCHINKYAERAPYSHIN 59
>SB_48704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1044
Score = 26.6 bits (56), Expect = 3.2
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 24 IYQRVGQECQKLPYTCVEAKRPHNKAL 50
IY Q C +P+T +RPH++ +
Sbjct: 703 IYLVSSQSCDAMPFTSCPIRRPHSRKI 729
>SB_2494| Best HMM Match : M (HMM E-Value=0.0056)
Length = 737
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 39 CVEAKRPHNKALNRYRDVNPYDHSRIVLQRSENDYINAN 77
C+E R K L+ RD N S + RS N + A+
Sbjct: 229 CLEKNRSLEKQLSTARDANSSLESELFAHRSRNSQLEAS 267
>SB_36989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 989
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 43 KRPHNK-ALNRYRDVNPYDHSRIVL 66
+R HNK A+ YRDV+ D++ +VL
Sbjct: 7 RRLHNKYAIGEYRDVSFVDNTNVVL 31
>SB_18446| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 571
Score = 26.2 bits (55), Expect = 4.3
Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 3 PKLNSIEAEYLD--IMHRNGWPLIYQRVGQECQKLPYTCVEAKRPHNKALNRYRDVNPYD 60
PKL +I L+ I N PL++ CQ+L C++ + +++ + + +
Sbjct: 104 PKLKTILESELEQYINPFNCIPLLHAAKAYSCQRLASVCIQCMKVSFSEVSKLEEFSSLN 163
Query: 61 HSRIVLQRSENDYI 74
S++ S D I
Sbjct: 164 FSQVFELISSRDII 177
>SB_31260| Best HMM Match : rve (HMM E-Value=5.2e-25)
Length = 1962
Score = 26.2 bits (55), Expect = 4.3
Identities = 11/17 (64%), Positives = 15/17 (88%)
Query: 79 VRLELYEPKGGLISGTT 95
+RLEL+EPK L+SG+T
Sbjct: 1555 IRLELHEPKFCLMSGST 1571
>SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3669
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 4/22 (18%)
Query: 60 DHSRIVLQRSEN----DYINAN 77
DHSR+VL EN DYINA+
Sbjct: 2289 DHSRVVLNEIENVRGSDYINAS 2310
>SB_44421| Best HMM Match : F5_F8_type_C (HMM E-Value=1.1e-29)
Length = 642
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 25 YQRVGQECQKLPYTCVE--AKRPHNKALNRYRDVNPYDHSRIVLQRSENDYIN 75
Y + + ++ PY + A+R +N+Y ++ PY H +R+ +IN
Sbjct: 549 YCHINKYAERAPYCHINKYAERAPYCHINKYAEIAPYCHINKYAERAPYCHIN 601
>SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)
Length = 1514
Score = 25.4 bits (53), Expect = 7.5
Identities = 11/17 (64%), Positives = 14/17 (82%)
Query: 79 VRLELYEPKGGLISGTT 95
+RLEL+EPK L+SG T
Sbjct: 1025 IRLELHEPKFCLMSGLT 1041
>SB_31766| Best HMM Match : RVT_1 (HMM E-Value=9.1e-09)
Length = 328
Score = 25.4 bits (53), Expect = 7.5
Identities = 11/16 (68%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Query: 39 CVEAKRPHNKALNRYR 54
C+E K PHNKAL R R
Sbjct: 175 CIETK-PHNKALKRNR 189
>SB_51718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1602
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/17 (58%), Positives = 15/17 (88%)
Query: 79 VRLELYEPKGGLISGTT 95
+RL+L+EPK L+SG+T
Sbjct: 1362 IRLDLHEPKFCLMSGST 1378
>SB_48208| Best HMM Match : rve (HMM E-Value=2e-20)
Length = 1557
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/17 (58%), Positives = 15/17 (88%)
Query: 79 VRLELYEPKGGLISGTT 95
+RL+L+EPK L+SG+T
Sbjct: 1317 IRLDLHEPKFCLMSGST 1333
>SB_10449| Best HMM Match : Ribosomal_L22 (HMM E-Value=7.8)
Length = 274
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/17 (58%), Positives = 15/17 (88%)
Query: 79 VRLELYEPKGGLISGTT 95
+RL+L+EPK L+SG+T
Sbjct: 38 IRLDLHEPKFCLMSGST 54
>SB_7873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 25.0 bits (52), Expect = 9.9
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 57 NPYDHSRIVLQRSENDYIN---ANLVRLELYEPKGGLISG 93
NP SR+V+ RS+++ +N A L+ L L++P G + G
Sbjct: 76 NPKYLSRLVIGRSQSERLNHSMAFLLSLPLHKPWGLMAPG 115
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.137 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,584,732
Number of Sequences: 59808
Number of extensions: 137938
Number of successful extensions: 292
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 248
Number of HSP's gapped (non-prelim): 48
length of query: 98
length of database: 16,821,457
effective HSP length: 71
effective length of query: 27
effective length of database: 12,575,089
effective search space: 339527403
effective search space used: 339527403
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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