GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002094-TA|BGIBMGA002094-PA|IPR000719|Protein kinase,
IPR011009|Protein kinase-like, IPR008271|Serine/threonine protein
kinase, active site, IPR002290|Serine/threonine protein kinase
         (715 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    74   2e-14
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    40   2e-04
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   6.9  
AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450 CY...    25   9.2  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 73.7 bits (173), Expect = 2e-14
 Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 15/236 (6%)

Query: 252 VAKTVISQ-YQTNSMEEYSTLRILRNTPNIVKLIECYSDGLNWVFVMENLWGGNL-FDRF 309
           VAK   S    T+ ++  +T+  +   P+IV+L+E YS     ++++ ++ G ++ F+  
Sbjct: 25  VAKFTASPGLSTSDLKREATICHMLKHPHIVELLETYSSE-GMLYMVFDMEGSDICFEVV 83

Query: 310 KHHQC---ISERDIKIYLRQVCSGLQYIHNNGLIHFDIKPENVMCCSL-NCLNIKIIDFG 365
           +        SE     YLRQ+   L+Y H N +IH D++P   +  +  N   +K+  FG
Sbjct: 84  RRAVAGFVYSEAVACHYLRQILEALRYCHENDIIHRDVRPACALLATADNSAPVKLGGFG 143

Query: 366 LT---KCARSRTPINRNFGFFSSVAPELYSGNVLTTAYDMWSVGILMGIGLLGYTP-RII 421
                   R     +   G    +APE+ +  V     D+W  G+++ + L G  P    
Sbjct: 144 SAVQLPNGRDSVETHGRVGCPHYMAPEVVARRVYGKPCDVWGAGVMLHVLLSGRLPFHGS 203

Query: 422 GKRSR----RLSVVFTSQEYLCISGAALHFFGKCLHTNPSRRLTAAQALNHPWMFD 473
           GKR +    R  V   + E+  IS  A     K L  NP  R T  + L+HPW+ D
Sbjct: 204 GKRLQDAIARGRVTLDTPEWKHISSNAKDLVLKMLAPNPISRPTITEVLDHPWIRD 259


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 40.3 bits (90), Expect = 2e-04
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 9/135 (6%)

Query: 278  PNIVKLIE-CYSDGLNWVFVMENLWGGNLFDRFKHHQC-ISERDIKIYLRQVCSGLQYIH 335
            PN++KL+  C +  +  +  +  L  G L D  ++++  I  + +  +  Q+  G+ Y+ 
Sbjct: 894  PNLLKLLAVCMTSQMMLITQLMPL--GCLLDYVRNNKDKIGSKALLNWSTQIARGMAYLE 951

Query: 336  NNGLIHFDIKPENVMCCSLNCLNIKIIDFGLTKCARSRTPINRNFGF---FSSVAPELYS 392
               L+H D+   NV+  + +C  +KI  FGL K     +   R  G       +A E   
Sbjct: 952  ERRLVHRDLAARNVLVQTPSC--VKITVFGLAKLLDFDSDEYRAAGGKMPIKWLALECIR 1009

Query: 393  GNVLTTAYDMWSVGI 407
              V T+  D+W+ GI
Sbjct: 1010 HRVFTSKSDVWAFGI 1024


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 25.0 bits (52), Expect = 6.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 627 RHYLVGQTQWIDRTDDIVDRTPIAG 651
           R+Y VG+T   D  + +V RT  AG
Sbjct: 596 RNYFVGRTLHYDTDEKVVSRTVSAG 620


>AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450
           CYP9L1 protein protein.
          Length = 533

 Score = 24.6 bits (51), Expect = 9.2
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 214 QYLKSLQNFYRDFLPLKLIGSGVYGKVM 241
           +Y K L NF R  + LK++G  V+ K+M
Sbjct: 210 RYGKDLSNFSRLKVALKIMGYQVFPKLM 237


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.136    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,271
Number of Sequences: 2123
Number of extensions: 30516
Number of successful extensions: 95
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88
Number of HSP's gapped (non-prelim): 4
length of query: 715
length of database: 516,269
effective HSP length: 69
effective length of query: 646
effective length of database: 369,782
effective search space: 238879172
effective search space used: 238879172
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 51 (24.6 bits)